BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os02g0585100 Os02g0585100|Os02g0585100
         (170 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os02g0585100  Heavy metal transport/detoxification protein d...   242   7e-65
Os02g0585200  Heavy metal transport/detoxification protein d...    96   1e-20
Os02g0584800  Heavy metal transport/detoxification protein d...    74   4e-14
Os02g0584700  Heavy metal transport/detoxification protein d...    72   2e-13
Os02g0584600                                                       67   6e-12

>Os02g0585100 Heavy metal transport/detoxification protein domain containing
           protein
          Length = 170

 Score =  242 bits (618), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 123/133 (92%), Positives = 123/133 (92%)

Query: 1   MDVEPSSIYSGSELMPGDSAPAQAELLSKLTSLARRSTHEFPRPLRSSQSHRSIDQQFSS 60
           MDVEPSSIYSGSELMPGDSAPAQAELLSKLTSLARRSTHEFPRPLRSSQSHRSIDQQFSS
Sbjct: 1   MDVEPSSIYSGSELMPGDSAPAQAELLSKLTSLARRSTHEFPRPLRSSQSHRSIDQQFSS 60

Query: 61  AMAQKIVIKVHMGSDKCRRKAMSLVAATGGVVSVELAGDDRSKXXXXXXXXXXKLTSLLR 120
           AMAQKIVIKVHMGSDKCRRKAMSLVAATGGVVSVELAGDDRSK          KLTSLLR
Sbjct: 61  AMAQKIVIKVHMGSDKCRRKAMSLVAATGGVVSVELAGDDRSKVVVVGEVDSVKLTSLLR 120

Query: 121 RKVGPAELVEVGD 133
           RKVGPAELVEVGD
Sbjct: 121 RKVGPAELVEVGD 133



>Os02g0585200 Heavy metal transport/detoxification protein domain containing
           protein
          Length = 133

 Score = 95.9 bits (237), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 53/74 (71%), Positives = 56/74 (75%), Gaps = 1/74 (1%)

Query: 62  MAQKIVIKVHMGSDKCRRKAMSLVAATGGVVSVELAGDDRSKXXXXXXXXXXKLTSLLRR 121
           M QKIVIKVHM SDKCRRKAM+L A+TGGVVSVELAGDDRSK           LT+ LRR
Sbjct: 1   MVQKIVIKVHMSSDKCRRKAMALAASTGGVVSVELAGDDRSKVVVVGDVDSIGLTNALRR 60

Query: 122 KV-GPAELVEVGDA 134
           KV G AELVEV DA
Sbjct: 61  KVDGSAELVEVSDA 74



>Os02g0584800 Heavy metal transport/detoxification protein domain containing
           protein
          Length = 121

 Score = 74.3 bits (181), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 42/70 (60%), Positives = 47/70 (67%), Gaps = 1/70 (1%)

Query: 64  QKIVIKVHMGSDKCRRKAMSLVAATGGVVSVELAGDDRSKXXXXXXXXXX-KLTSLLRRK 122
           QKIVIKV M  DKCR KAM+LVAATGGV SV LAGD + +           KLT+ LR+K
Sbjct: 4   QKIVIKVEMSCDKCRSKAMALVAATGGVDSVALAGDGKDQVVVVGDGVDSIKLTAALRKK 63

Query: 123 VGPAELVEVG 132
           VG A LV VG
Sbjct: 64  VGHATLVTVG 73



>Os02g0584700 Heavy metal transport/detoxification protein domain containing
           protein
          Length = 117

 Score = 72.0 bits (175), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 40/70 (57%), Positives = 48/70 (68%), Gaps = 1/70 (1%)

Query: 64  QKIVIKVHMGSDKCRRKAMSLVAATGGVVSVELAGDDRSKXXXXXXXXXX-KLTSLLRRK 122
           QKIVIKV+M SDKCR KAM+LVA+T GV SV LAGD + +           KLT+ LR+K
Sbjct: 4   QKIVIKVNMASDKCRSKAMALVASTSGVDSVALAGDGKDQVVVVGDGVDSIKLTTALRKK 63

Query: 123 VGPAELVEVG 132
           VG A L+ VG
Sbjct: 64  VGHATLMTVG 73



>Os02g0584600 
          Length = 119

 Score = 67.0 bits (162), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 38/70 (54%), Positives = 48/70 (68%), Gaps = 1/70 (1%)

Query: 64  QKIVIKVHMGSDKCRRKAMSLVAATGGVVSVELAGDDRSKXXXXX-XXXXXKLTSLLRRK 122
           QKIVIK++M SDKCR KAM+LVA+T GV SV LAGD + +           +LT+ LR+K
Sbjct: 4   QKIVIKMNMASDKCRSKAMALVASTTGVDSVALAGDGKDQLVVVGDGVDSIELTTALRKK 63

Query: 123 VGPAELVEVG 132
           VG A L+ VG
Sbjct: 64  VGHATLMTVG 73



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.314    0.127    0.338 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 3,901,546
Number of extensions: 125494
Number of successful extensions: 299
Number of sequences better than 1.0e-10: 5
Number of HSP's gapped: 298
Number of HSP's successfully gapped: 5
Length of query: 170
Length of database: 17,035,801
Length adjustment: 94
Effective length of query: 76
Effective length of database: 12,127,685
Effective search space: 921704060
Effective search space used: 921704060
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 152 (63.2 bits)