Os02g0585200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Heavy metal transport/detoxification protein domain containing protein.
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Os02g0585200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Heavy metal transport/detoxification protein domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 281.48 | 0.788 | 10.8 | -2.2 | 1.31 | 2.5 | 0.746 | -1.7 | 0.237 | 0.197 | 20 | 3492 | -- | -- |
| 282.47 | 0.783 | 10.7 | -2.15 | 1.32 | 2.95 | 0.608 | -- | 0.204 | 0.183 | 20.21 | 5008 | -- | -- |
| 283.87 | 0.785 | 10.8 | -2.22 | 1.31 | 2.51 | -- | -1.63 | 0.236 | 0.196 | 20.04 | 3490 | -- | -- |
| 284.15 | 0.785 | 10.7 | -2.18 | 1.32 | 2.95 | -- | -- | 0.198 | 0.192 | 20.24 | 5005 | -- | -- |
| 386.13 | 0.915 | 10.8 | -2.24 | -- | 2.77 | -- | -1.18 | 0.191 | -- | 20.26 | 3794 | -- | -- |
| 428.89 | 0.971 | 10.6 | -0.312 | 1.4 | -- | 0.691 | -- | 1.04 | 0.148 | -- | -- | -- | -- |
| 430.96 | 0.972 | 10.6 | -0.339 | 1.39 | -- | -- | -- | 1.04 | 0.158 | -- | -- | -- | -- |
| 387.86 | 0.917 | 10.7 | -2.12 | -- | 3.09 | -- | -- | 0.247 | -- | 19.96 | 3793 | -- | -- |
| 350.43 | 0.872 | 10.7 | -- | 1.33 | 1.53 | -- | -- | 0.481 | 0.185 | 22.6 | 5040 | -- | -- |
| 553.39 | 1.1 | 10.5 | -0.294 | -- | -- | -- | -- | 1.06 | -- | -- | -- | -- | -- |
| 433.99 | 0.974 | 10.5 | -- | 1.39 | -- | -- | -- | 1.07 | 0.145 | -- | -- | -- | -- |
| 443.98 | 0.981 | 10.6 | -- | -- | 1.88 | -- | -- | 0.784 | -- | 25.57 | 3875 | -- | -- |
| 555.67 | 1.1 | 10.5 | -- | -- | -- | -- | -- | 1.09 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 250.45 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 1 | 6 |
| 3 | 251.07 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 1 | 6 |
| 4 | 251.07 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 1 | 6 |
| 5 | 251.16 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 1 | 6 |
| 54 | 256.24 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 6 | 1 |
| 108 | 260.73 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 18 | 22 |
| 124 | 261.92 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 4 | 12 |
| 135 | 262.07 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 22 | 18 |
| 142 | 262.13 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 3 | 13 |
| 146 | 262.64 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 18 | 14 |
| 178 | 263.89 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 18 | 19 |
| 220 | 264.98 | radiation | 1.0 | 14400 | > th | dose independent | sin | 5 | NA |
| 224 | 265.18 | radiation | 1.0 | 14400 | < th | dose independent | sin | 5 | NA |
| 229 | 265.38 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 4 | 4 |
| 245 | 265.61 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 22 | 10 |
| 249 | 265.64 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 19 | 13 |
| 253 | 265.68 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 3 | 5 |
| 257 | 265.76 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 4 | 9 |
| 271 | 265.89 | wind | 3.0 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 302 | 266.17 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 338 | 266.98 | wind | 3.0 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 417 | 267.88 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 4 | 12 |
| 425 | 268.10 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 5 | 10 |
| 483 | 269.68 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 8 | 1 |
| 485 | 269.70 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 1 | 17 |
| 492 | 269.97 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 9 | 23 |
| 495 | 270.16 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 14 | 23 |
| 499 | 270.19 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 7 | 1 |
| 500 | 270.19 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 7 | 1 |
| 502 | 270.25 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 11 | 21 |
| 505 | 270.29 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 14 | 18 |
| 508 | 270.33 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 510 | 270.35 | humidity | 90.0 | 14400 | > th | dose dependent | sin | 3 | NA |
| 511 | 270.41 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 7 | 1 |
| 517 | 270.54 | radiation | 1.0 | 14400 | > th | dose independent | no | NA | NA |
| 564 | 270.56 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 14 | 20 |
| 586 | 270.94 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 7 | 1 |
| 603 | 271.26 | humidity | 70.0 | 43200 | > th | dose dependent | rect. | 15 | 2 |
| 618 | 271.33 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 626 | 271.55 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 637 | 271.98 | temperature | 25.0 | 43200 | < th | dose dependent | rect. | 7 | 10 |
| 645 | 272.03 | temperature | 25.0 | 43200 | < th | dose dependent | rect. | 9 | 1 |
| 661 | 272.13 | temperature | 25.0 | 43200 | < th | dose dependent | rect. | 13 | 1 |
| 708 | 272.34 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 17 | 2 |
| 747 | 272.56 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 22 | 1 |
| 750 | 272.57 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 10 | 1 |
| 755 | 272.59 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 16 | 4 |
| 761 | 272.61 | radiation | 1.0 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 782 | 272.70 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 9 | 23 |
| 788 | 272.73 | temperature | 25.0 | 43200 | < th | dose dependent | rect. | 16 | 1 |
| 791 | 272.78 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 16 | 4 |
| 797 | 272.83 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 14 | 23 |
| 800 | 272.87 | temperature | 25.0 | 43200 | < th | dose dependent | sin | 23 | NA |
| 851 | 273.13 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 11 | 23 |
| 863 | 273.19 | radiation | 1.0 | 14400 | < th | dose independent | no | NA | NA |
| 867 | 273.19 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 4 | 22 |
| 872 | 273.19 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 24 | 23 |
| 891 | 273.21 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 4 | 19 |
| 922 | 273.35 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 14 | 18 |
| 924 | 273.37 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 14 | 20 |
| 939 | 273.48 | temperature | 25.0 | 43200 | < th | dose dependent | rect. | 18 | 1 |
| 995 | 273.86 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 6 | 12 |