Os02g0585100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Heavy metal transport/detoxification protein domain containing protein.
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Os02g0585100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Heavy metal transport/detoxification protein domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 379.66 | 0.915 | 7.44 | -4.85 | 2.11 | 2.31 | 0.515 | -2.71 | -0.19 | 0.29 | 20 | 2725 | -- | -- |
| 391.96 | 0.922 | 7.35 | -4.39 | 2.12 | 2.79 | 0.471 | -- | -0.0925 | 0.292 | 20 | 2770 | -- | -- |
| 380.73 | 0.909 | 7.45 | -4.87 | 2.13 | 2.33 | -- | -2.67 | -0.194 | 0.307 | 20 | 2770 | -- | -- |
| 392.57 | 0.923 | 7.35 | -4.43 | 2.12 | 2.78 | -- | -- | -0.0942 | 0.313 | 20.04 | 2784 | -- | -- |
| 645.21 | 1.18 | 7.4 | -4.88 | -- | 2.71 | -- | -2.34 | -0.214 | -- | 20.09 | 2502 | -- | -- |
| 547.18 | 1.1 | 7.19 | -2.91 | 2.23 | -- | 0.249 | -- | 0.612 | 0.435 | -- | -- | -- | -- |
| 547.44 | 1.1 | 7.19 | -2.92 | 2.23 | -- | -- | -- | 0.61 | 0.45 | -- | -- | -- | -- |
| 651.28 | 1.19 | 7.29 | -3.99 | -- | 2.85 | -- | -- | 0.0175 | -- | 20.3 | 957 | -- | -- |
| 747.88 | 1.27 | 7.12 | -- | 2.11 | 0.744 | -- | -- | 0.889 | 23.6 | 22.3 | 937 | -- | -- |
| 858.89 | 1.37 | 7.15 | -2.84 | -- | -- | -- | -- | 0.647 | -- | -- | -- | -- | -- |
| 772.36 | 1.3 | 7.12 | -- | 2.18 | -- | -- | -- | 0.936 | 0.382 | -- | -- | -- | -- |
| 976.61 | 1.46 | 7.21 | -- | -- | 1.4 | -- | -- | 0.513 | -- | 22.4 | 900 | -- | -- |
| 1072.39 | 1.53 | 7.08 | -- | -- | -- | -- | -- | 0.963 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 367.08 | temperature | 20 | 1440 | < th | dose independent | rect. | 22 | 3 |
| 3 | 367.71 | temperature | 20 | 1440 | < th | dose independent | rect. | 21 | 6 |
| 7 | 368.34 | temperature | 20 | 1440 | > th | dose independent | rect. | 21 | 6 |
| 10 | 369.14 | temperature | 20 | 1440 | > th | dose independent | rect. | 22 | 3 |
| 25 | 370.83 | temperature | 20 | 1440 | < th | dose independent | rect. | 21 | 10 |
| 34 | 371.93 | temperature | 20 | 1440 | > th | dose independent | rect. | 19 | 12 |
| 89 | 375.94 | temperature | 20 | 1440 | > th | dose independent | sin | 11 | NA |
| 90 | 376.04 | temperature | 20 | 1440 | < th | dose independent | sin | 11 | NA |
| 122 | 378.21 | temperature | 20 | 1440 | > th | dose independent | rect. | 1 | 1 |
| 157 | 379.85 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 2 |
| 165 | 380.44 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 2 |
| 435 | 392.73 | atmosphere | 995 | 43200 | < th | dose independent | rect. | 21 | 16 |
| 505 | 394.68 | atmosphere | 995 | 43200 | > th | dose independent | rect. | 21 | 17 |
| 507 | 394.70 | atmosphere | 995 | 43200 | > th | dose independent | rect. | 23 | 13 |
| 508 | 394.71 | wind | 3 | 43200 | < th | dose dependent | rect. | 8 | 1 |
| 541 | 395.30 | atmosphere | 995 | 43200 | < th | dose dependent | sin | 9 | NA |
| 561 | 395.74 | atmosphere | 995 | 43200 | > th | dose independent | rect. | 1 | 10 |
| 583 | 396.02 | temperature | 20 | 4320 | > th | dose independent | rect. | 6 | 22 |
| 584 | 396.03 | atmosphere | 995 | 43200 | < th | dose independent | rect. | 2 | 8 |
| 591 | 396.10 | atmosphere | 995 | 43200 | < th | dose independent | rect. | 24 | 11 |
| 596 | 396.13 | atmosphere | 995 | 43200 | < th | dose dependent | rect. | 1 | 8 |
| 607 | 396.29 | atmosphere | 995 | 43200 | > th | dose independent | rect. | 2 | 8 |
| 614 | 396.48 | atmosphere | 995 | 43200 | < th | dose dependent | rect. | 4 | 4 |
| 623 | 396.61 | atmosphere | 995 | 43200 | < th | dose independent | rect. | 3 | 6 |
| 634 | 396.71 | atmosphere | 995 | 43200 | > th | dose independent | rect. | 5 | 3 |
| 682 | 397.24 | atmosphere | 995 | 43200 | > th | dose independent | rect. | 4 | 5 |
| 770 | 398.18 | temperature | 20 | 4320 | < th | dose independent | rect. | 6 | 22 |
| 776 | 398.28 | temperature | 20 | 4320 | > th | dose independent | rect. | 1 | 23 |
| 788 | 398.35 | temperature | 20 | 4320 | > th | dose independent | no | NA | NA |
| 791 | 398.39 | atmosphere | 995 | 43200 | < th | dose dependent | rect. | 21 | 13 |
| 858 | 399.02 | atmosphere | 995 | 43200 | < th | dose independent | rect. | 5 | 3 |
| 923 | 399.67 | humidity | 90 | 14400 | > th | dose dependent | rect. | 4 | 12 |
| 945 | 399.90 | atmosphere | 995 | 43200 | < th | dose independent | sin | 7 | NA |
| 970 | 400.18 | temperature | 20 | 4320 | < th | dose independent | no | NA | NA |
| 974 | 400.20 | humidity | 90 | 14400 | > th | dose dependent | rect. | 5 | 2 |
| 977 | 400.24 | temperature | 20 | 4320 | < th | dose independent | rect. | 1 | 23 |
| 1000 | 400.54 | humidity | 90 | 14400 | > th | dose dependent | rect. | 3 | 14 |