Os02g0584800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Heavy metal transport/detoxification protein domain containing protein.
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Os02g0584800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Heavy metal transport/detoxification protein domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 146.95 | 0.57 | 11.8 | -1.3 | 0.152 | 0.286 | -0.0483 | -2.78 | -0.236 | 23.5 | 21 | 3670 | -- | -- |
| 148.02 | 0.567 | 11.7 | -1.1 | 0.0941 | 0.907 | -0.205 | -- | -0.228 | 23.2 | 20.21 | 21323 | -- | -- |
| 146.96 | 0.565 | 11.8 | -1.3 | 0.152 | 0.285 | -- | -2.78 | -0.236 | 23.5 | 21 | 3670 | -- | -- |
| 146.68 | 0.564 | 11.7 | -1.39 | 0.121 | 1.14 | -- | -- | -0.332 | 0.362 | 20.29 | 21660 | -- | -- |
| 148.41 | 0.567 | 11.8 | -1.3 | -- | 0.31 | -- | -2.76 | -0.238 | -- | 21 | 3670 | -- | -- |
| 167.79 | 0.607 | 11.6 | -0.32 | 0.172 | -- | -0.222 | -- | 0.105 | 23.8 | -- | -- | -- | -- |
| 168 | 0.607 | 11.6 | -0.311 | 0.173 | -- | -- | -- | 0.106 | 23.7 | -- | -- | -- | -- |
| 147.89 | 0.566 | 11.7 | -1.4 | -- | 1.16 | -- | -- | -0.32 | -- | 20.1 | 21103 | -- | -- |
| 168.35 | 0.604 | 11.6 | -- | 0.185 | 0.285 | -- | -- | 0.0934 | 23.3 | 14.7 | 13273 | -- | -- |
| 169.89 | 0.609 | 11.6 | -0.306 | -- | -- | -- | -- | 0.108 | -- | -- | -- | -- | -- |
| 170.55 | 0.611 | 11.6 | -- | 0.17 | -- | -- | -- | 0.141 | 23.6 | -- | -- | -- | -- |
| 167.48 | 0.603 | 11.6 | -- | -- | 0.34 | -- | -- | 0.0775 | -- | 22.8 | 3661 | -- | -- |
| 172.36 | 0.613 | 11.6 | -- | -- | -- | -- | -- | 0.142 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 131.12 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 3 | 14 |
| 16 | 132.09 | humidity | 90.0 | 14400 | > th | dose dependent | sin | 2 | NA |
| 26 | 132.50 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 4 | 6 |
| 108 | 135.55 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 146 | 136.38 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 11 | 23 |
| 148 | 136.41 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 2 | 14 |
| 149 | 136.41 | humidity | 90.0 | 14400 | > th | dose dependent | no | NA | NA |
| 163 | 136.50 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 15 | 23 |
| 189 | 136.68 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 5 | 23 |
| 195 | 136.76 | humidity | 90.0 | 14400 | > th | dose independent | sin | 4 | NA |
| 216 | 136.92 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 3 | 7 |
| 229 | 137.01 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 6 | 2 |
| 248 | 137.16 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 23 | 18 |
| 409 | 138.80 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 3 | 1 |
| 410 | 138.80 | atmosphere | 1005.0 | 43200 | < th | dose independent | rect. | 1 | 1 |
| 415 | 138.88 | atmosphere | 1005.0 | 43200 | < th | dose independent | rect. | 3 | 1 |
| 432 | 139.12 | humidity | 90.0 | 14400 | < th | dose independent | sin | 4 | NA |
| 433 | 139.12 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 1 | 1 |
| 434 | 139.13 | atmosphere | 1005.0 | 43200 | < th | dose independent | rect. | 1 | 3 |
| 445 | 139.19 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 1 | 3 |
| 458 | 139.29 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 2 | 13 |
| 461 | 139.32 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 11 | 23 |
| 480 | 139.42 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 24 | 17 |
| 482 | 139.43 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 2 | 23 |
| 487 | 139.49 | humidity | 90.0 | 14400 | > th | dose independent | no | NA | NA |
| 489 | 139.50 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 6 | 23 |
| 513 | 139.58 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 15 | 23 |
| 543 | 139.76 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 579 | 139.95 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 5 | 10 |
| 581 | 139.96 | atmosphere | 1005.0 | 43200 | < th | dose independent | rect. | 23 | 5 |
| 586 | 139.98 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 2 | 8 |
| 587 | 139.98 | atmosphere | 1005.0 | 43200 | < th | dose independent | rect. | 18 | 10 |
| 614 | 140.11 | atmosphere | 1005.0 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 662 | 140.32 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 7 | 1 |
| 696 | 140.53 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 18 | 11 |
| 726 | 140.67 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 7 | 1 |
| 738 | 140.75 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 6 | 4 |
| 741 | 140.76 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 7 | 6 |
| 743 | 140.77 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 747 | 140.78 | atmosphere | 1005.0 | 43200 | < th | dose independent | rect. | 18 | 6 |
| 750 | 140.80 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 6 | 4 |
| 765 | 140.86 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 7 | 6 |
| 777 | 140.92 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 11 | 17 |
| 789 | 140.98 | atmosphere | 1005.0 | 43200 | < th | dose independent | sin | 13 | NA |
| 819 | 141.10 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 7 | 8 |
| 826 | 141.11 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 24 | 1 |
| 855 | 141.21 | atmosphere | 1005.0 | 43200 | < th | dose independent | rect. | 23 | 1 |
| 860 | 141.22 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 7 | 8 |
| 865 | 141.24 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 6 | 1 |
| 868 | 141.24 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 6 | 1 |
| 876 | 141.27 | atmosphere | 1005.0 | 43200 | < th | dose independent | rect. | 10 | 19 |
| 903 | 141.39 | atmosphere | 1005.0 | 43200 | > th | dose independent | sin | 12 | NA |
| 942 | 141.47 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 23 | 6 |
| 953 | 141.51 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 19 | 10 |
| 994 | 141.63 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 19 | 1 |