BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0533900 Os02g0533900|AK121892
(301 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os02g0533900 Similar to Carbon-nitrogen hydrolase family pr... 596 e-171
Os07g0485100 Similar to Beta-ureidopropionase (EC 3.5.1.6) ... 100 2e-21
Os12g0502500 Nitrilase/cyanide hydratase and apolipoprotein... 82 5e-16
Os03g0175600 Similar to Nit protein 2 (CUA002) 78 9e-15
AK107586 71 8e-13
Os06g0206000 Nitrilase/cyanide hydratase and apolipoprotein... 70 2e-12
>Os02g0533900 Similar to Carbon-nitrogen hydrolase family protein
Length = 301
Score = 596 bits (1536), Expect = e-171, Method: Compositional matrix adjust.
Identities = 285/285 (100%), Positives = 285/285 (100%)
Query: 17 QFACTDVESENVDTAERLIREAHKKGANIVLVQELFEGQYFCQAQRLDFFQRAKPYKGNP 76
QFACTDVESENVDTAERLIREAHKKGANIVLVQELFEGQYFCQAQRLDFFQRAKPYKGNP
Sbjct: 17 QFACTDVESENVDTAERLIREAHKKGANIVLVQELFEGQYFCQAQRLDFFQRAKPYKGNP 76
Query: 77 TIIRFQKLAKELEVVIPVSFFEEANNAHYNSVAIIDADGTDLGLYRKSHIPDGPGYQEKF 136
TIIRFQKLAKELEVVIPVSFFEEANNAHYNSVAIIDADGTDLGLYRKSHIPDGPGYQEKF
Sbjct: 77 TIIRFQKLAKELEVVIPVSFFEEANNAHYNSVAIIDADGTDLGLYRKSHIPDGPGYQEKF 136
Query: 137 YFNPGDTGFKAFKTKYATIGVGICWDQWFPECARAMVLQGAEILFYPTAIGSEPQDNNLD 196
YFNPGDTGFKAFKTKYATIGVGICWDQWFPECARAMVLQGAEILFYPTAIGSEPQDNNLD
Sbjct: 137 YFNPGDTGFKAFKTKYATIGVGICWDQWFPECARAMVLQGAEILFYPTAIGSEPQDNNLD 196
Query: 197 SREHWKRVMQGHAGANLVPLVASNRIGRETVETEHGESTITFFGNSFIAGPTGEIVKLAN 256
SREHWKRVMQGHAGANLVPLVASNRIGRETVETEHGESTITFFGNSFIAGPTGEIVKLAN
Sbjct: 197 SREHWKRVMQGHAGANLVPLVASNRIGRETVETEHGESTITFFGNSFIAGPTGEIVKLAN 256
Query: 257 DKDEDVLVAEFDLDEIKSTRHGWGIFRDRRPDLYKVLLTLDGEKS 301
DKDEDVLVAEFDLDEIKSTRHGWGIFRDRRPDLYKVLLTLDGEKS
Sbjct: 257 DKDEDVLVAEFDLDEIKSTRHGWGIFRDRRPDLYKVLLTLDGEKS 301
>Os07g0485100 Similar to Beta-ureidopropionase (EC 3.5.1.6) (Beta-alanine
synthase) (N- carbamoyl-beta-alanine amidohydrolase)
Length = 413
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 129/281 (45%), Gaps = 22/281 (7%)
Query: 28 VDTAERLIREAHKKGANIVLVQELFEGQY-FCQAQRLDFFQRAKPYKGNPTIIRFQKLAK 86
++ + +I A G NI+ +QE + + FC ++ + + A+P G T Q+LAK
Sbjct: 121 MEKVKPMIDAAGDAGVNILCLQEAWTMPFAFCTREK-RWCEFAEPVDGESTQF-LQQLAK 178
Query: 87 ELEVVIPVSFFEEANNAH---YNSVAIIDADGTDLGLYRKSHIPDGPGYQEKFYFNPGDT 143
+ +VI E N +N+ +I G +G++RK+HIP + E Y+ G+T
Sbjct: 179 KYNMVIVSPILERDVNHGEIVWNTAVVIGNHGNIIGIHRKNHIPRVGDFNESTYYMEGNT 238
Query: 144 GFKAFKTKYATIGVGICWDQWFPECARAMVLQGAEILFYPTAIGSEPQDNNLDSREHWKR 203
G F+T Y IGV IC+ + P A L GAEI+F P+A E S W
Sbjct: 239 GHPVFETAYGKIGVNICYGRHHPLNWLAFGLNGAEIVFNPSATVGE------LSEPMWPI 292
Query: 204 VMQGHAGANLVPLVASNRIGRETV---------ETEHGESTITFFGNSFIAGPTGEIVKL 254
+ A AN + + NR+G E + +H + F+G+S + P
Sbjct: 293 EARNAAIANSYFVGSINRVGTEVFPNPFTSGDGKPQHADFG-HFYGSSHFSAPDASCTPS 351
Query: 255 ANDKDEDVLVAEFDLDEIKSTRHGWGIFRDRRPDLYKVLLT 295
+ + +++++ DL+ + + WG R D Y LL+
Sbjct: 352 LSRYRDGLMISDMDLNLCRQIKDKWGFRMTARYDTYASLLS 392
>Os12g0502500 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
domain containing protein
Length = 323
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 125/272 (45%), Gaps = 28/272 (10%)
Query: 27 NVDTAERLIREAHKKGANIVLVQELFEGQYFCQAQRLDFFQRAKPYKGNPTIIRFQKLAK 86
N T RL +EA G + E+F F ++ + + A+P G P + R+ LAK
Sbjct: 62 NYATCSRLAKEAASSGVKFLCFPEVFS---FIGSKDGESIKIAEPLDG-PIMQRYCSLAK 117
Query: 87 ELEVVIPVSFFEEA---NNAHYNSVAIIDADGTDLGLYRKSHI--PDGPG---YQEKFYF 138
E + + + F+E ++ YN+ +ID G YRK H+ D PG Y+E +
Sbjct: 118 ESSMWLSLGGFQEKGPDDSHQYNTHVLIDDSGEIRSSYRKIHLFDVDVPGNMVYKESRFT 177
Query: 139 NPGDTGFKAFKTKYATIGVGICWDQWFPECARAMVLQ-GAEILFYPTAIGSEPQDNNLDS 197
GDT A + + +G+ +C+D FPE + + + A++L P+A +
Sbjct: 178 TAGDT-VVAVDSPFGRLGLTVCYDLRFPELYQCLRFKHQAQVLLVPSAF------TKVTG 230
Query: 198 REHWKRVMQGHAGANLVPLVASNRIGRETVETEHGESTITFFGNSFIAGPTGEIV-KLAN 256
HW+ +++ A ++A+ + G+ + E +G+S I P G ++ +L +
Sbjct: 231 EAHWEILLRARAIETQCYVIAAAQAGKHNEKRES-------YGDSIIIDPWGTVIARLPD 283
Query: 257 DKDEDVLVAEFDLDEIKSTRHGWGIFRDRRPD 288
VA+ DL ++++ R I R+ D
Sbjct: 284 RLSTGFAVADVDLSKVEAVRTKMPISEHRKFD 315
>Os03g0175600 Similar to Nit protein 2 (CUA002)
Length = 310
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 100/224 (44%), Gaps = 21/224 (9%)
Query: 76 PTIIRFQKLAKELEV-VIPVSFFEEANNAHYNSVAIIDADGTDLGLYRKSH-----IPDG 129
P+ ++A+ L++ ++ S E + N YN+ + +DG G +RK H IP
Sbjct: 93 PSFSMMSEVARSLQITLVGGSISERSGNKLYNTCCVFGSDGELKGKHRKIHLFDIDIPGK 152
Query: 130 PGYQEKFYFNPGDTGFKAFKTKYATIGVGICWDQWFPECARAMVLQGAEILFYPTAIGSE 189
++E G T IG+GIC+D F E A +GA +L YP A
Sbjct: 153 ITFKESKTLTAGQD-LTVVDTDVGRIGIGICYDIRFQELAMLYAARGAHLLCYPGAF--- 208
Query: 190 PQDNNLDSREHWKRVMQGHAGANLVPLVASNRIGRETVETEHGESTITFFGNSFIAGPTG 249
N HW+ + + A N + VA+ R+T + +G+S + GP G
Sbjct: 209 ---NMTTGPLHWELLQRARAADNQL-FVATCAPARDT------SAGYIAWGHSTLVGPFG 258
Query: 250 EIVKLANDKDEDVLVAEFDLDEIKSTRHGWGIFRDRRPDLYKVL 293
E++ A + +E ++AE D I R + RR DLY+++
Sbjct: 259 EVIATA-EHEETTIMAEIDYSLIDQRRQFLPLQYQRRGDLYQLV 301
>AK107586
Length = 372
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 103/237 (43%), Gaps = 28/237 (11%)
Query: 73 KGNPTIIRFQKLAKELEVVIPVSFFEEANNAH---YNSVAIIDADGTDLGLYRKSH---- 125
K +P++ + A+E +VV+ E ++ YNS + + +G + ++RK H
Sbjct: 139 KLSPSLKMLSETAREAKVVLVGGSVPERDDLTGNIYNSSCVFNEEGQLISIHRKLHLFDI 198
Query: 126 -IPDGPGYQEKFYFNPGDTGFKAFKTKYATIGVGICWDQWFPECARAMVLQGAEILFYPT 184
IP +QE GD F G+GIC+D FPE A GA + YP
Sbjct: 199 DIPGKMTFQESETLAGGDR-VTLFDCSLGRFGLGICYDLRFPEPAMIAGRLGAGCMIYPG 257
Query: 185 AIGSEPQDNNLDSREHWKRVMQGHAGANLVPLVASN--RIGRETVETE--------HGES 234
A N W+ +++ A N V + + R ++ ++ E GE
Sbjct: 258 AF------NTTTGPVSWELLLRARATDNQVYTLGCSPARPSQQAMDGESTDKDGWRQGEK 311
Query: 235 TITFFGNSFIAGPTGEI-VKLANDKDEDVLVAEFDLDEIKSTRHGWGIFRDRRPDLY 290
+G+S + GP G++ KLA ++ED L D +E+ TR I RR D+Y
Sbjct: 312 AYPAWGHSTVVGPLGDVKAKLA--EEEDTLFFTLDPEEVAQTRRNIPISTQRRFDVY 366
>Os06g0206000 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
domain containing protein
Length = 287
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 99/232 (42%), Gaps = 19/232 (8%)
Query: 75 NPTIIRFQKLAKELEV-VIPVSFFEEANNAHYNSVAIIDADGTDLGLYRKSH-----IPD 128
+P++ ++A + ++ S E ++ +N+ +I DG +RK H IP
Sbjct: 43 SPSVSMLSEVAARRRITIVGGSIPERSSGRLFNTCCVIGPDGQIKAKHRKLHLFEIDIPG 102
Query: 129 GPGYQEKFYFNPGDTGFKAFKTKYATIGVGICWDQWFPECARAMVLQGAEILFYPTAIGS 188
++E F G T IG+GIC D FPE A +GA ++ YP+A
Sbjct: 103 DITFRESDTFTAGQEP-TIVDTDVGRIGIGICHDIRFPELAMLYRSRGAHLICYPSAF-- 159
Query: 189 EPQDNNLDSREHWKRVMQGHAGANLVPLVASNRIGRETVETEHGESTITFFGNSFIAGPT 248
N+ + + +MQ + V + R+ + ES +G+S + GP
Sbjct: 160 -----NMSTGQLLWDLMQKSRAVDNQLFVVTCSPARD----PNAESDYMIWGHSSLIGPF 210
Query: 249 GEIVKLANDKDEDVLVAEFDLDEIKSTRHGWGIFRDRRPDLYKVLLTLDGEK 300
GE++ A +E +V E D I++ R + RR DLY + GE
Sbjct: 211 GEVIATAG-HEEATVVGEIDHSMIQTIRDNLPLEMQRREDLYSTHWLMSGEN 261
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.320 0.138 0.418
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 9,970,263
Number of extensions: 432397
Number of successful extensions: 756
Number of sequences better than 1.0e-10: 6
Number of HSP's gapped: 748
Number of HSP's successfully gapped: 6
Length of query: 301
Length of database: 17,035,801
Length adjustment: 100
Effective length of query: 201
Effective length of database: 11,814,401
Effective search space: 2374694601
Effective search space used: 2374694601
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 156 (64.7 bits)