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Os02g0533900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Carbon-nitrogen hydrolase family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.7 (0.0161) R2 : 0.134
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.284 (0.0339) R2dN8 : 0.172 R2N8 : 0.134
σ : 0.303
deviance : 42.27
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
26.2 0.24 12.6 0.252 0.432 0.325 -0.135 -0.238 0.361 22.4 71.03 1401 -- --
26.33 0.239 12.7 0.218 0.432 0.315 -0.146 -- 0.35 22.5 72 1401 -- --
26.27 0.239 12.6 0.256 0.431 0.326 -- -0.235 0.361 22.4 71.15 1402 -- --
26.4 0.239 12.7 0.22 0.437 0.316 -- -- 0.351 22.5 72 1392 -- --
36.8 0.283 12.6 0.263 -- 0.388 -- -0.32 0.386 -- 71.65 1522 -- --
30.09 0.257 12.7 0.148 0.43 -- -0.184 -- 0.301 22.4 -- -- -- --
30.23 0.257 12.7 0.155 0.432 -- -- -- 0.301 22.3 -- -- -- --
36.88 0.284 12.7 0.18 -- 0.217 -- -- 0.3 -- 72.47 1527 -- --
27.63 0.245 12.7 -- 0.439 0.287 -- -- 0.323 22.5 71.59 1383 -- --
41.58 0.301 12.7 0.162 -- -- -- -- 0.302 -- -- -- -- --
30.86 0.26 12.7 -- 0.433 -- -- -- 0.284 22.3 -- -- -- --
37.73 0.287 12.7 -- -- 0.214 -- -- 0.28 -- 72.47 1527 -- --
42.27 0.303 12.7 -- -- -- -- -- 0.284 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 24.50 humidity 70 720 > th dose independent rect. 16 4
2 24.50 humidity 50 720 > th dose dependent rect. 17 4
6 24.65 humidity 70 720 > th dose independent rect. 16 13
12 24.95 temperature 30 720 < th dose independent rect. 17 3
31 25.25 temperature 30 720 < th dose independent rect. 16 13
34 25.31 radiation 10 720 < th dose dependent rect. 16 11
39 25.39 radiation 10 720 < th dose dependent rect. 16 4
42 25.43 humidity 70 1440 > th dose independent rect. 17 16
43 25.44 temperature 30 720 < th dose independent rect. 17 11
55 25.51 radiation 30 720 < th dose dependent rect. 15 6
94 25.77 humidity 70 1440 > th dose independent rect. 17 20
100 25.80 humidity 70 720 > th dose independent sin 14 NA
102 25.81 radiation 10 720 < th dose independent rect. 15 6
104 25.81 temperature 25 720 > th dose dependent rect. 20 1
110 25.84 humidity 70 1440 > th dose independent sin 11 NA
125 25.88 humidity 70 1440 < th dose independent rect. 16 17
136 25.91 radiation 10 720 < th dose dependent sin 14 NA
141 25.93 radiation 1 90 > th dose independent rect. 7 23
175 26.02 humidity 70 720 < th dose independent rect. 14 19
181 26.03 radiation 10 720 < th dose dependent rect. 8 13
189 26.05 temperature 25 720 > th dose dependent rect. 17 15
191 26.06 radiation 1 720 < th dose independent rect. 17 10
198 26.07 radiation 1 720 < th dose independent rect. 13 7
215 26.11 humidity 70 720 > th dose independent rect. 10 18
219 26.12 humidity 80 720 > th dose independent rect. 8 13
220 26.13 humidity 70 1440 < th dose independent rect. 17 1
222 26.13 humidity 70 1440 < th dose independent rect. 16 3
223 26.13 radiation 1 720 < th dose independent rect. 11 9
226 26.13 humidity 70 1440 < th dose independent rect. 16 21
242 26.16 humidity 70 720 < th dose independent sin 14 NA
245 26.16 temperature 25 720 > th dose dependent rect. 17 5
259 26.17 humidity 50 720 > th dose dependent rect. 8 13
261 26.18 humidity 70 720 < th dose independent rect. 14 6
278 26.18 radiation 30 720 < th dose dependent rect. 15 14
293 26.20 radiation 10 720 < th dose dependent rect. 8 20
308 26.22 radiation 10 720 > th dose independent rect. 12 21
328 26.25 wind 1 4320 < th dose independent rect. 4 2
331 26.25 radiation 10 720 < th dose independent rect. 15 12
365 26.26 humidity 70 1440 > th dose independent rect. 12 22
370 26.27 wind 1 1440 < th dose independent rect. 3 4
390 26.29 humidity 70 1440 < th dose independent sin 11 NA
403 26.30 temperature 30 1440 < th dose independent rect. 11 1
420 26.31 temperature 30 1440 > th dose dependent rect. 11 1
424 26.31 humidity 50 720 > th dose dependent rect. 11 10
436 26.32 wind 7 43200 > th dose dependent rect. 19 1
441 26.32 humidity 50 720 > th dose dependent rect. 9 18
442 26.33 temperature 30 1440 > th dose independent rect. 11 1
454 26.34 humidity 70 1440 > th dose independent no NA NA
456 26.34 wind 1 4320 > th dose independent rect. 4 2
457 26.34 temperature 30 1440 < th dose independent rect. 9 2
463 26.34 humidity 70 1440 > th dose independent rect. 5 15
501 26.34 humidity 70 1440 > th dose independent rect. 23 23
525 26.35 radiation 1 720 < th dose independent rect. 11 16
556 26.35 radiation 40 720 < th dose dependent rect. 15 16
558 26.36 temperature 30 1440 > th dose independent rect. 9 2
575 26.36 humidity 80 1440 < th dose dependent rect. 17 21
583 26.37 humidity 80 1440 < th dose independent rect. 7 7
592 26.37 temperature 30 1440 < th dose independent rect. 19 17
598 26.37 humidity 50 720 > th dose dependent sin 17 NA
601 26.37 humidity 50 720 > th dose dependent rect. 16 11
611 26.38 radiation 1 720 < th dose independent rect. 7 13
616 26.38 temperature 25 720 > th dose dependent sin 13 NA
648 26.39 temperature 30 1440 < th dose independent rect. 22 14
673 26.39 humidity 80 1440 < th dose dependent rect. 6 15
702 26.40 temperature 30 1440 > th dose dependent sin 7 NA
705 26.40 radiation 10 4320 < th dose dependent rect. 24 5
781 26.41 humidity 50 720 > th dose dependent rect. 15 13
800 26.42 temperature 30 1440 > th dose independent sin 7 NA
903 26.43 radiation 10 90 < th dose dependent rect. 5 23
904 26.44 temperature 30 1440 < th dose independent sin 8 NA
965 26.45 temperature 10 720 > th dose dependent rect. 13 11