Os12g0502500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os12g0502500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 16.16 | 0.189 | 11.1 | -0.577 | 0.362 | 0.437 | 0.743 | -0.641 | -0.0555 | 0.0405 | 17.09 | 9 | -- | -- |
| 16.99 | 0.193 | 11.1 | -0.576 | 0.434 | 0.371 | 0.0764 | -- | -0.0583 | 0.126 | 17.09 | 9 | -- | -- |
| 16.62 | 0.19 | 11.1 | -0.586 | 0.373 | 0.427 | -- | -0.0536 | -0.0566 | 0.0586 | 18.56 | 9 | -- | -- |
| 16.63 | 0.19 | 11.1 | -0.586 | 0.374 | 0.425 | -- | -- | -0.0587 | 0.0695 | 18.05 | 8 | -- | -- |
| 18.21 | 0.199 | 11.1 | -0.573 | -- | 0.703 | -- | -0.0713 | -0.0524 | -- | 16.08 | 8 | -- | -- |
| 19.71 | 0.208 | 11.1 | -0.589 | 0.819 | -- | 0.14 | -- | -0.0623 | 24 | -- | -- | -- | -- |
| 19.79 | 0.208 | 11.1 | -0.594 | 0.819 | -- | -- | -- | -0.0629 | 24 | -- | -- | -- | -- |
| 18.23 | 0.199 | 11.1 | -0.578 | -- | 0.703 | -- | -- | -0.0499 | -- | 15.93 | 8 | -- | -- |
| 25.59 | 0.236 | 11.1 | -- | 0.365 | 0.443 | -- | -- | 0.00909 | 23.9 | 21.46 | 10 | -- | -- |
| 61.98 | 0.368 | 11.1 | -0.569 | -- | -- | -- | -- | -0.0516 | -- | -- | -- | -- | -- |
| 29.1 | 0.252 | 11.1 | -- | 0.811 | -- | -- | -- | 0.00328 | 23.9 | -- | -- | -- | -- |
| 27.02 | 0.242 | 11.1 | -- | -- | 0.706 | -- | -- | 0.0147 | -- | 17.09 | 9 | -- | -- |
| 70.52 | 0.392 | 11.1 | -- | -- | -- | -- | -- | 0.0115 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 15.90 | radiation | 10 | 270 | > th | dose independent | sin | 11 | NA |
| 3 | 16.06 | radiation | 20 | 10 | < th | dose dependent | rect. | 9 | 23 |
| 4 | 16.07 | radiation | 10 | 270 | > th | dose independent | rect. | 17 | 16 |
| 5 | 16.09 | radiation | 10 | 270 | > th | dose independent | rect. | 6 | 3 |
| 19 | 16.12 | radiation | 10 | 270 | > th | dose independent | rect. | 7 | 1 |
| 34 | 16.24 | radiation | 20 | 270 | < th | dose dependent | rect. | 23 | 16 |
| 35 | 16.24 | radiation | 20 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 37 | 16.26 | radiation | 20 | 10 | < th | dose dependent | no | NA | NA |
| 39 | 16.27 | radiation | 20 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 40 | 16.29 | radiation | 20 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 47 | 16.35 | radiation | 20 | 90 | < th | dose dependent | sin | 3 | NA |
| 48 | 16.36 | radiation | 10 | 90 | > th | dose independent | sin | 4 | NA |
| 55 | 16.38 | radiation | 20 | 90 | < th | dose dependent | rect. | 19 | 23 |
| 61 | 16.41 | radiation | 20 | 10 | < th | dose dependent | sin | 3 | NA |
| 72 | 16.43 | radiation | 20 | 270 | < th | dose dependent | rect. | 22 | 21 |
| 86 | 16.49 | radiation | 20 | 90 | < th | dose dependent | rect. | 23 | 23 |
| 96 | 16.52 | radiation | 20 | 90 | < th | dose independent | rect. | 24 | 15 |
| 101 | 16.53 | radiation | 1 | 270 | > th | dose dependent | sin | 11 | NA |
| 120 | 16.56 | radiation | 20 | 10 | < th | dose dependent | rect. | 24 | 15 |
| 136 | 16.59 | radiation | 20 | 90 | < th | dose dependent | no | NA | NA |
| 139 | 16.60 | radiation | 1 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 143 | 16.60 | radiation | 20 | 10 | < th | dose dependent | rect. | 24 | 23 |
| 147 | 16.61 | temperature | 25 | 10 | > th | dose dependent | rect. | 4 | 7 |
| 148 | 16.61 | temperature | 25 | 10 | > th | dose dependent | rect. | 2 | 9 |
| 150 | 16.61 | temperature | 25 | 10 | > th | dose dependent | rect. | 22 | 13 |
| 165 | 16.64 | radiation | 1 | 90 | > th | dose dependent | sin | 9 | NA |
| 172 | 16.65 | radiation | 20 | 30 | > th | dose independent | rect. | 15 | 20 |
| 181 | 16.66 | radiation | 1 | 270 | > th | dose dependent | rect. | 7 | 1 |
| 188 | 16.67 | radiation | 10 | 90 | > th | dose independent | rect. | 17 | 23 |
| 192 | 16.67 | humidity | 60 | 10 | > th | dose dependent | rect. | 24 | 22 |
| 220 | 16.69 | radiation | 10 | 90 | > th | dose dependent | rect. | 15 | 20 |
| 225 | 16.70 | radiation | 20 | 10 | < th | dose independent | rect. | 9 | 23 |
| 226 | 16.70 | radiation | 1 | 90 | > th | dose dependent | rect. | 5 | 6 |
| 248 | 16.71 | humidity | 60 | 10 | > th | dose dependent | rect. | 24 | 18 |
| 254 | 16.72 | radiation | 1 | 270 | > th | dose dependent | rect. | 5 | 4 |
| 283 | 16.74 | radiation | 20 | 10 | < th | dose dependent | rect. | 2 | 13 |
| 284 | 16.74 | humidity | 60 | 10 | > th | dose dependent | rect. | 24 | 14 |
| 297 | 16.75 | radiation | 10 | 90 | > th | dose independent | rect. | 6 | 10 |
| 336 | 16.77 | radiation | 20 | 270 | < th | dose dependent | sin | 10 | NA |
| 337 | 16.77 | radiation | 40 | 270 | < th | dose dependent | sin | 11 | NA |
| 382 | 16.80 | radiation | 10 | 90 | < th | dose independent | rect. | 24 | 17 |
| 439 | 16.86 | humidity | 90 | 14400 | < th | dose independent | rect. | 21 | 4 |
| 440 | 16.86 | radiation | 20 | 90 | < th | dose independent | rect. | 24 | 23 |
| 469 | 16.87 | humidity | 90 | 14400 | < th | dose independent | rect. | 22 | 1 |
| 488 | 16.87 | humidity | 80 | 14400 | > th | dose dependent | rect. | 22 | 3 |
| 503 | 16.89 | temperature | 25 | 270 | > th | dose independent | rect. | 7 | 1 |
| 504 | 16.89 | humidity | 90 | 14400 | > th | dose independent | rect. | 22 | 3 |
| 505 | 16.89 | radiation | 10 | 10 | > th | dose independent | rect. | 7 | 11 |
| 535 | 16.90 | radiation | 10 | 90 | > th | dose independent | no | NA | NA |
| 670 | 16.93 | temperature | 25 | 90 | > th | dose independent | rect. | 4 | 7 |
| 671 | 16.93 | radiation | 10 | 270 | < th | dose independent | rect. | 22 | 21 |
| 675 | 16.93 | humidity | 50 | 14400 | > th | dose dependent | rect. | 23 | 2 |
| 677 | 16.93 | humidity | 90 | 90 | < th | dose dependent | rect. | 6 | 5 |
| 712 | 16.94 | humidity | 80 | 14400 | > th | dose dependent | rect. | 21 | 10 |
| 725 | 16.95 | radiation | 10 | 10 | > th | dose independent | no | NA | NA |
| 727 | 16.95 | radiation | 20 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 728 | 16.95 | temperature | 25 | 270 | > th | dose independent | rect. | 5 | 4 |
| 807 | 16.95 | radiation | 10 | 10 | > th | dose independent | rect. | 13 | 23 |
| 840 | 16.96 | radiation | 10 | 10 | > th | dose independent | rect. | 17 | 23 |
| 884 | 16.98 | humidity | 90 | 14400 | < th | dose independent | rect. | 21 | 11 |
| 940 | 17.00 | radiation | 10 | 10 | > th | dose independent | rect. | 15 | 23 |
| 942 | 17.00 | temperature | 25 | 270 | > th | dose dependent | rect. | 7 | 1 |
| 943 | 17.00 | humidity | 90 | 14400 | > th | dose dependent | rect. | 6 | 1 |
| 981 | 17.01 | humidity | 90 | 14400 | < th | dose independent | rect. | 17 | 14 |