BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os12g0502500 Os12g0502500|AK069786
(323 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G08790.1 | chr4:5608489-5611118 REVERSE LENGTH=308 426 e-120
AT5G12040.1 | chr5:3885162-3887772 FORWARD LENGTH=370 155 3e-38
AT2G27450.2 | chr2:11737666-11739577 REVERSE LENGTH=327 80 2e-15
AT3G44320.1 | chr3:15993419-15995493 FORWARD LENGTH=347 77 2e-14
AT3G44310.1 | chr3:15986901-15988841 FORWARD LENGTH=347 75 3e-14
AT3G44300.1 | chr3:15983351-15985172 FORWARD LENGTH=340 75 4e-14
AT5G22300.1 | chr5:7379401-7381764 FORWARD LENGTH=356 65 7e-11
AT5G64370.1 | chr5:25739264-25741031 FORWARD LENGTH=409 57 1e-08
>AT4G08790.1 | chr4:5608489-5611118 REVERSE LENGTH=308
Length = 307
Score = 426 bits (1096), Expect = e-120, Method: Compositional matrix adjust.
Identities = 195/266 (73%), Positives = 230/266 (86%), Gaps = 1/266 (0%)
Query: 47 RVGVVQMTSVGDLDANYATCSRLAKEAASSGVKFLCFPEVFSFIGSKDGESIKIAEPLDG 106
RV QMTSV DL N+ATCSRL +EAA +G K +CFPE FSF+G K+GES+KIAEPLDG
Sbjct: 38 RVAAAQMTSVNDLMTNFATCSRLVQEAALAGAKLICFPENFSFVGDKEGESVKIAEPLDG 97
Query: 107 PIMQRYCSLAKESSMWLSLGGFQEKGPDDSHQYNTHVLIDDSGEIRSSYRKIHLFDVDVP 166
P+M+RYCSLA++S++WLSLGGFQE+ DD+H NTHV+IDD+G IR +Y+K+HLFDVDVP
Sbjct: 98 PVMERYCSLARDSNIWLSLGGFQERF-DDTHLCNTHVVIDDAGMIRDTYQKMHLFDVDVP 156
Query: 167 GNMVYKESRFTTAGDTVVAVDSPFGRLGLTVCYDLRFPELYQCLRFKHQAQVLLVPSAFT 226
G YKES FT G +V+VDSP GRLGLTVCYDLRFP++YQ LRF+ +AQVLLVPSAFT
Sbjct: 157 GGSSYKESSFTVPGTKIVSVDSPVGRLGLTVCYDLRFPKIYQQLRFEQKAQVLLVPSAFT 216
Query: 227 KVTGEAHWEILLRARAIETQCYVIAAAQAGKHNEKRESYGDSIIIDPWGTVIARLPDRLS 286
KVTGEAHWEILLRARAIETQCYVIAAAQAGKHNEKRESYGD++IIDPWGTV+ RLPDR+S
Sbjct: 217 KVTGEAHWEILLRARAIETQCYVIAAAQAGKHNEKRESYGDTLIIDPWGTVVGRLPDRVS 276
Query: 287 TGFAVADVDLSKVEAVRTKMPISEHR 312
TG VAD+D S +++VRTKMPI + R
Sbjct: 277 TGIVVADIDFSLIDSVRTKMPIDKQR 302
>AT5G12040.1 | chr5:3885162-3887772 FORWARD LENGTH=370
Length = 369
Score = 155 bits (392), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 89/273 (32%), Positives = 142/273 (52%), Gaps = 11/273 (4%)
Query: 48 VGVVQMTSVGDLDANYATCSRLAKEAASSGVKFLCFPEVFSFIGSKDGESIKIAEPLDG- 106
+G+ Q++ D N + + +EAAS G K + PE+++ S D + AE +D
Sbjct: 90 IGLCQLSVTSDKKRNISHAKKAIEEAASKGAKLVLLPEIWNSPYSNDSFPV-YAEEIDAG 148
Query: 107 ----PIMQRYCSLAKESSMWLSLGGFQEKGPDDSHQYNTHVLIDDSGEIRSSYRKIHLFD 162
P ++K + + G E+ D YNT + GE+++ +RKIHLFD
Sbjct: 149 GDASPSTAMLSEVSKRLKITIIGGSIPERVGD--RLYNTCCVFGSDGELKAKHRKIHLFD 206
Query: 163 VDVPGNMVYKESRFTTAGDTVVAVDSPFGRLGLTVCYDLRFPELYQCLRFKHQAQVLLVP 222
+D+PG + + ES+ TAG+T VD+ GR+G+ +CYD+RF EL + A +L P
Sbjct: 207 IDIPGKITFMESKTLTAGETPTIVDTDVGRIGIGICYDIRFQEL-AMIYAARGAHLLCYP 265
Query: 223 SAFTKVTGEAHWEILLRARAIETQCYVIAAAQAGKHNEKRESYGDSIIIDPWGTVIARLP 282
AF TG HWE+L RARA + Q YV + A ++G S ++ P+G V+A
Sbjct: 266 GAFNMTTGPLHWELLQRARATDNQLYVATCSPARDSGAGYTAWGHSTLVGPFGEVLATTE 325
Query: 283 DRLSTGFAVADVDLSKVEAVRTKMPISEHRKFD 315
+A++D S +E RT +P++ R+ D
Sbjct: 326 HE--EAIIIAEIDYSILEQRRTSLPLNRQRRGD 356
>AT2G27450.2 | chr2:11737666-11739577 REVERSE LENGTH=327
Length = 326
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 120/265 (45%), Gaps = 28/265 (10%)
Query: 69 LAKEAASSGVKFLCFPEVFS---FIGSKDGESIKIAEPL-DGPIMQRYCSLAKESSMWLS 124
L +EA + G + E+F F ++ + K A+P + P + R LAKE + +
Sbjct: 60 LVREAHAKGANIILIQELFEGYYFCQAQREDFFKRAKPYKNHPTIARMQKLAKELGVVIP 119
Query: 125 LGGFQEKGPDDSHQYNTHVLIDDSGEIRSSYRKIHLFDVDVPGNMVYKESRFTTAGDTVV 184
+ F+E ++ YN+ +ID G YRK H+ D PG Y+E + GDT
Sbjct: 120 VSFFEEA---NTAHYNSIAIIDADGTDLGIYRKSHI--PDGPG---YQEKFYFNPGDTGF 171
Query: 185 AV-DSPFGRLGLTVCYDLRFPELYQCLRFKHQAQVLLVPSAFTK------VTGEAHWEIL 237
V + F ++G+ +C+D FPE + + + A++L P+A + HW +
Sbjct: 172 KVFQTKFAKIGVAICWDQWFPEAARAMVLQG-AEILFYPTAIGSEPQDQGLDSRDHWRRV 230
Query: 238 LRARAIETQCYVIAAAQAGKHNEKRES-------YGDSIIIDPWGTVIARLPDRLSTGFA 290
++ A ++A+ + GK + E YG S I P G ++A D+ S
Sbjct: 231 MQGHAGANVVPLVASNRIGKEIIETEHGPSQITFYGTSFIAGPTGEIVAEADDK-SEAVL 289
Query: 291 VADVDLSKVEAVRTKMPISEHRKFD 315
VA DL +++ R + R+ D
Sbjct: 290 VAQFDLDMIKSKRQSWGVFRDRRPD 314
>AT3G44320.1 | chr3:15993419-15995493 FORWARD LENGTH=347
Length = 346
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 129/305 (42%), Gaps = 58/305 (19%)
Query: 47 RVGVVQMTSV-GDLDANYATCSRLAKEAASSGVKFLCFPEVFSFIGS-----KDGESIKI 100
RV +VQ ++V D A + EAAS G K + FPE +FIG + G ++ +
Sbjct: 26 RVTIVQSSTVYNDTPATLDKAEKFIVEAASKGAKLVLFPE--AFIGGYPRGFRFGLAVGV 83
Query: 101 ---------------AEPLDGPIMQRYCSLAKESSMWLSLGGFQEKGPDDSHQYNTHVLI 145
A + GP ++R LA ++++ L +G ++ G Y T +
Sbjct: 84 HNEEGRDEFRNYHASAIKVPGPEVERLAELAGKNNVHLVMGAIEKDG---YTLYCTALFF 140
Query: 146 DDSGEIRSSYRKIHLFDVDVPGNMVYKESRFTTAGDTVVAVDSPFGRLGLTVCYDLRFPE 205
G+ +RK+ ++ ++ + G T+ D+P G++G +C++ R P
Sbjct: 141 SPQGQFLGKHRKVMPTSLE---RCIWGQGD----GSTIPVYDTPIGKIGAAICWENRMP- 192
Query: 206 LYQCLRFKHQAQVLLVPSAFTKVTGEAHWEILLRARAIETQCYVIAAAQAGKHNEKRE-- 263
LY+ + ++ P+A + W+ + A+E C+V++A Q K E E
Sbjct: 193 LYRTALYAKGIEIYCAPTADYSL----EWQASMIHIAVEGGCFVLSAHQFCKRREFPEHP 248
Query: 264 -----------------SYGDSIIIDPWGTVIARLPDRLSTGFAVADVDLSKVEAVRTKM 306
S G S+II P G V+A P+ S G AD+DL + +
Sbjct: 249 DYLFNDIVDTKEHDPTVSGGGSVIISPLGKVLAG-PNYESEGLVTADLDLGDIARAKLYF 307
Query: 307 PISEH 311
+ H
Sbjct: 308 DVVGH 312
>AT3G44310.1 | chr3:15986901-15988841 FORWARD LENGTH=347
Length = 346
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 133/311 (42%), Gaps = 66/311 (21%)
Query: 47 RVGVVQMTSV-GDLDANYATCSRLAKEAASSGVKFLCFPEVFSFIGS-----KDGESIKI 100
RV +VQ ++V D A + EAAS G + + FPE FIG + G ++ +
Sbjct: 26 RVTIVQSSTVYNDTPATIDKAEKYIVEAASKGAELVLFPE--GFIGGYPRGFRFGLAVGV 83
Query: 101 ---------------AEPLDGPIMQRYCSLAKESSMWLSLGGFQEKGPDDSHQYNTHVLI 145
A + GP + R +A+++ ++L +G +++G Y T +
Sbjct: 84 HNEEGRDEFRKYHASAIHVPGPEVARLADVARKNHVYLVMGAIEKEG---YTLYCTVLFF 140
Query: 146 DDSGEIRSSYRKIHLFDVDVPGNMVYKESRFTTAGDTVVAVDSPFGRLGLTVCYDLRFPE 205
G+ +RK+ ++ ++ + G T+ D+P G+LG +C++ R P
Sbjct: 141 SPQGQFLGKHRKLMPTSLE---RCIWGQGD----GSTIPVYDTPIGKLGAAICWENRMP- 192
Query: 206 LYQCLRFKHQAQVLLVPSAFTKVTGEAHWEILLRARAIETQCYVIAAAQ----------- 254
LY+ + ++ P+A G W+ + AIE C+V++A Q
Sbjct: 193 LYRTALYAKGIELYCAPTA----DGSKEWQSSMLHIAIEGGCFVLSACQFCQRKHFPDHP 248
Query: 255 --------AGKHNEKRESYGDSIIIDPWGTVIARLPDRLSTGFAVADVDLSKVEAVRTKM 306
K ++ S G S+II P G V+A P+ S G AD+DL + R K+
Sbjct: 249 DYLFTDWYDDKEHDSIVSQGGSVIISPLGQVLAG-PNFESEGLVTADIDLGDI--ARAKL 305
Query: 307 PISEHRKFDSV 317
FDSV
Sbjct: 306 ------YFDSV 310
>AT3G44300.1 | chr3:15983351-15985172 FORWARD LENGTH=340
Length = 339
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 130/311 (41%), Gaps = 66/311 (21%)
Query: 47 RVGVVQMTSV-GDLDANYATCSRLAKEAASSGVKFLCFPEVFSFIGSKD-------GESI 98
R +VQ ++V D A ++ EAAS G + + FPE +FIG G +
Sbjct: 19 RATIVQASTVYNDTPATLEKANKFIVEAASKGSELVVFPE--AFIGGYPRGFRFGLGVGV 76
Query: 99 KIAEPLD-------------GPIMQRYCSLAKESSMWLSLGGFQEKGPDDSHQYNTHVLI 145
E D GP +++ LA +++++L +G ++ G Y T +
Sbjct: 77 HNEEGRDEFRKYHASAIKVPGPEVEKLAELAGKNNVYLVMGAIEKDG---YTLYCTALFF 133
Query: 146 DDSGEIRSSYRKIHLFDVDVPGNMVYKESRFTTAGDTVVAVDSPFGRLGLTVCYDLRFPE 205
G+ +RK+ ++ ++ + G T+ D+P G+LG +C++ R P
Sbjct: 134 SPQGQFLGKHRKLMPTSLE---RCIWGQGD----GSTIPVYDTPIGKLGAAICWENRMP- 185
Query: 206 LYQCLRFKHQAQVLLVPSAFTKVTGEAHWEILLRARAIETQCYVIAAAQ----------- 254
LY+ + ++ P+A G W+ + AIE C+V++A Q
Sbjct: 186 LYRTALYAKGIELYCAPTA----DGSKEWQSSMLHIAIEGGCFVLSACQFCLRKDFPDHP 241
Query: 255 --------AGKHNEKRESYGDSIIIDPWGTVIARLPDRLSTGFAVADVDLSKVEAVRTKM 306
K + S G S+II P G V+A P+ S G AD+DL V R K+
Sbjct: 242 DYLFTDWYDDKEPDSIVSQGGSVIISPLGQVLAG-PNFESEGLITADLDLGDV--ARAKL 298
Query: 307 PISEHRKFDSV 317
FDSV
Sbjct: 299 ------YFDSV 303
>AT5G22300.1 | chr5:7379401-7381764 FORWARD LENGTH=356
Length = 355
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 123/304 (40%), Gaps = 56/304 (18%)
Query: 47 RVGVVQMTSVG-DLDANYATCSRLAKEAASSGVKFLCFPEVFSFIGSKDGESIKIA---- 101
R VVQ ++V D A RL EAA +G + + FPE F G G + ++A
Sbjct: 37 RATVVQASTVFYDTPATLDKAERLLSEAAENGSQLVVFPEAF-IGGYPRGSTFELAIGSR 95
Query: 102 -------------EPLD--GPIMQRYCSLAKESSMWLSLGGFQEKGPDDSHQYNTHVLID 146
+D GP ++R +AK+ ++L +G + +G Y T + D
Sbjct: 96 TAKGRDDFRKYHASAIDVPGPEVERLALMAKKYKVYLVMGVIEREG---YTLYCTVLFFD 152
Query: 147 DSGEIRSSYRKIHLFDVDVPGNMVYKESRFTTAGDTVVAVDSPFGRLGLTVCYDLRFPEL 206
G +RK+ +P + F G T+ D+P G++G +C++ R P L
Sbjct: 153 SQGLFLGKHRKL------MPTALERCIWGFGD-GSTIPVFDTPIGKIGAAICWENRMPSL 205
Query: 207 YQCLRFKHQAQVLLVPSAFTKVTGEAHWEILLRARAIETQCYVIAAAQAGKHNE------ 260
+ + ++ P+A ++ T W + A+E C+V++A Q + +
Sbjct: 206 RTAM-YAKGIEIYCAPTADSRET----WLASMTHIALEGGCFVLSANQFCRRKDYPSPPE 260
Query: 261 -----KRESY--------GDSIIIDPWGTVIARLPDRLSTGFAVADVDLSKVEAVRTKMP 307
ES G S II P G V+A P+ AD+DL + +
Sbjct: 261 YMFSGSEESLTPDSVVCAGGSSIISPLGIVLAG-PNYRGEALITADLDLGDIARAKFDFD 319
Query: 308 ISEH 311
+ H
Sbjct: 320 VVGH 323
>AT5G64370.1 | chr5:25739264-25741031 FORWARD LENGTH=409
Length = 408
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 120/287 (41%), Gaps = 36/287 (12%)
Query: 47 RVGVVQMTSVGDLDANYATCSR--------LAKEAASSGVKFLCFPEVFSF---IGSKDG 95
RVG++Q + A ++ +R + A +GV LC E ++ +++
Sbjct: 91 RVGLIQNSIALPTTAPFSDQTRGIFDKLKPIIDAAGVAGVNILCLQEAWTMPFAFCTRER 150
Query: 96 ESIKIAEPLDGPIMQRYCSLAKESSMWLSLGGFQEKGPDDSH-QYNTHVLIDDSGEIRSS 154
+ AEP+DG + LAK+ +M + + E+ D +NT V+I ++G I
Sbjct: 151 RWCEFAEPVDGESTKFLQELAKKYNMVI-VSPILERDIDHGEVLWNTAVIIGNNGNIIGK 209
Query: 155 YRKIHLFDVDVPGNMVYKESRFTTAGDTVVAV-DSPFGRLGLTVCYDLRFPELYQCLRFK 213
+RK H +P + ES + GDT V ++ FG++ + +CY P +
Sbjct: 210 HRKNH-----IPRVGDFNESTYYMEGDTGHPVFETVFGKIAVNICYGRHHPLNWLAFGL- 263
Query: 214 HQAQVLLVPSAFTKVTGEAHWEILLRARAIETQCYVIAAAQAG---------------KH 258
+ A+++ PSA E W I R AI +V + + G +H
Sbjct: 264 NGAEIVFNPSATVGELSEPMWPIEARNAAIANSYFVGSINRVGTEVFPNPFTSGDGKPQH 323
Query: 259 NEKRESYGDSIIIDPWGTVIARLPDRLSTGFAVADVDLSKVEAVRTK 305
N+ YG S P + L R G ++D+DL+ + K
Sbjct: 324 NDFGHFYGSSHFSAPDASCTPSL-SRYKDGLLISDMDLNLCRQYKDK 369
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.321 0.135 0.407
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 6,008,061
Number of extensions: 243300
Number of successful extensions: 472
Number of sequences better than 1.0e-05: 8
Number of HSP's gapped: 458
Number of HSP's successfully gapped: 8
Length of query: 323
Length of database: 11,106,569
Length adjustment: 99
Effective length of query: 224
Effective length of database: 8,392,385
Effective search space: 1879894240
Effective search space used: 1879894240
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 112 (47.8 bits)