Os07g0485100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Beta-ureidopropionase (EC 3.5.1.6) (Beta-alanine synthase) (N- carbamoyl-beta-alanine amidohydrolase).
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Os07g0485100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Beta-ureidopropionase (EC 3.5.1.6) (Beta-alanine synthase) (N- carbamoyl-beta-alanine amidohydrolase).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 75.84 | 0.409 | 10.3 | 0.47 | 0.699 | -0.823 | -0.251 | 1.45 | 0.06 | 0.395 | 49.66 | 10 | -- | -- |
| 75.77 | 0.405 | 10.3 | 0.381 | 0.697 | -1.01 | -0.267 | -- | 0.0498 | 0.403 | 54.24 | 85 | -- | -- |
| 76.08 | 0.406 | 10.3 | 0.476 | 0.699 | -0.818 | -- | 1.64 | 0.0603 | 0.388 | 49.65 | 10 | -- | -- |
| 75.89 | 0.406 | 10.3 | 0.449 | 0.67 | -1.15 | -- | -- | 0.0481 | 0.328 | 54.23 | 85 | -- | -- |
| 100.84 | 0.468 | 10.2 | 0.462 | -- | -1.28 | -- | 0.72 | 0.108 | -- | 44.81 | 155 | -- | -- |
| 84.09 | 0.43 | 10.2 | 0.535 | 0.793 | -- | -0.553 | -- | 0.101 | 0.358 | -- | -- | -- | -- |
| 85.41 | 0.433 | 10.2 | 0.557 | 0.795 | -- | -- | -- | 0.104 | 0.341 | -- | -- | -- | -- |
| 101.08 | 0.468 | 10.2 | 0.462 | -- | -1.45 | -- | -- | 0.114 | -- | 45.06 | 142 | -- | -- |
| 81.06 | 0.419 | 10.3 | -- | 0.698 | -1.28 | -- | -- | 0.0125 | 0.262 | 54.83 | 85 | -- | -- |
| 125.11 | 0.523 | 10.2 | 0.583 | -- | -- | -- | -- | 0.117 | -- | -- | -- | -- | -- |
| 93.58 | 0.453 | 10.3 | -- | 0.803 | -- | -- | -- | 0.0422 | 0.377 | -- | -- | -- | -- |
| 105.9 | 0.479 | 10.3 | -- | -- | -1.72 | -- | -- | -0.00339 | -- | 51.91 | 85 | -- | -- |
| 134.09 | 0.54 | 10.2 | -- | -- | -- | -- | -- | 0.0521 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 72.31 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 12 | 23 |
| 2 | 72.52 | atmosphere | 1010.0 | 270 | < th | dose dependent | rect. | 12 | 19 |
| 5 | 72.70 | atmosphere | 1010.0 | 90 | < th | dose dependent | rect. | 15 | 18 |
| 7 | 72.84 | radiation | 1.0 | 30 | > th | dose dependent | rect. | 11 | 1 |
| 18 | 73.16 | radiation | 20.0 | 30 | > th | dose independent | rect. | 11 | 1 |
| 23 | 73.38 | temperature | 25.0 | 270 | < th | dose independent | rect. | 8 | 3 |
| 30 | 73.52 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 11 | 16 |
| 35 | 73.58 | radiation | 20.0 | 10 | > th | dose dependent | rect. | 7 | 5 |
| 51 | 73.61 | temperature | 25.0 | 270 | < th | dose independent | rect. | 7 | 6 |
| 52 | 73.61 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 11 | 16 |
| 59 | 73.66 | radiation | 30.0 | 10 | > th | dose dependent | rect. | 13 | 23 |
| 64 | 73.70 | radiation | 1.0 | 10 | > th | dose dependent | rect. | 9 | 3 |
| 83 | 73.92 | temperature | 15.0 | 30 | > th | dose independent | rect. | 12 | 23 |
| 116 | 74.04 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 12 | 10 |
| 182 | 74.21 | wind | 1.0 | 30 | > th | dose independent | rect. | 12 | 23 |
| 192 | 74.29 | atmosphere | 1010.0 | 90 | < th | dose dependent | sin | 15 | NA |
| 202 | 74.38 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 18 | 13 |
| 206 | 74.41 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 12 | 9 |
| 209 | 74.42 | radiation | 40.0 | 10 | > th | dose independent | rect. | 13 | 23 |
| 211 | 74.43 | atmosphere | 1005.0 | 90 | > th | dose dependent | rect. | 11 | 12 |
| 241 | 74.52 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 12 | 23 |
| 246 | 74.54 | atmosphere | 1005.0 | 90 | > th | dose dependent | sin | 18 | NA |
| 259 | 74.61 | radiation | 40.0 | 10 | > th | dose independent | rect. | 9 | 3 |
| 279 | 74.61 | radiation | 1.0 | 10 | > th | dose dependent | rect. | 13 | 23 |
| 286 | 74.65 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 16 | 10 |
| 288 | 74.65 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 1 | 10 |
| 290 | 74.67 | radiation | 40.0 | 10 | < th | dose independent | rect. | 23 | 23 |
| 293 | 74.69 | humidity | 90.0 | 30 | < th | dose dependent | rect. | 11 | 1 |
| 300 | 74.72 | wind | 1.0 | 30 | > th | dose independent | rect. | 1 | 10 |
| 310 | 74.76 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 1 | 8 |
| 314 | 74.78 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 23 | 12 |
| 328 | 74.88 | radiation | 40.0 | 10 | < th | dose independent | rect. | 3 | 19 |
| 373 | 74.97 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 389 | 75.04 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 17 | 10 |
| 390 | 75.04 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 11 | 14 |
| 406 | 75.12 | atmosphere | 1010.0 | 90 | < th | dose dependent | rect. | 15 | 8 |
| 415 | 75.17 | radiation | 30.0 | 10 | < th | dose independent | rect. | 3 | 8 |
| 458 | 75.24 | humidity | 70.0 | 30 | < th | dose independent | rect. | 11 | 1 |
| 460 | 75.25 | atmosphere | 1005.0 | 270 | < th | dose independent | rect. | 13 | 18 |
| 495 | 75.31 | radiation | 30.0 | 10 | < th | dose independent | rect. | 1 | 10 |
| 497 | 75.31 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 9 | 18 |
| 514 | 75.35 | radiation | 40.0 | 10 | < th | dose independent | rect. | 1 | 21 |
| 515 | 75.35 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 3 | 2 |
| 524 | 75.38 | wind | 1.0 | 30 | > th | dose independent | rect. | 3 | 8 |
| 532 | 75.39 | atmosphere | 1010.0 | 10 | < th | dose dependent | rect. | 14 | 8 |
| 537 | 75.40 | radiation | 40.0 | 10 | > th | dose independent | rect. | 11 | 1 |
| 549 | 75.42 | wind | 9.0 | 30 | < th | dose independent | rect. | 11 | 1 |
| 554 | 75.43 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 3 | 4 |
| 559 | 75.44 | temperature | 30.0 | 720 | > th | dose independent | rect. | 13 | 1 |
| 616 | 75.53 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 11 | 16 |
| 643 | 75.54 | radiation | 1.0 | 10 | > th | dose dependent | rect. | 11 | 23 |
| 644 | 75.55 | atmosphere | 1005.0 | 270 | > th | dose independent | sin | 16 | NA |
| 647 | 75.55 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 11 | 19 |
| 649 | 75.57 | wind | 9.0 | 30 | < th | dose independent | rect. | 12 | 23 |
| 655 | 75.59 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 12 | 1 |
| 659 | 75.59 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 12 | 1 |
| 660 | 75.59 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 13 | 23 |
| 663 | 75.59 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 22 | 1 |
| 667 | 75.60 | temperature | 20.0 | 30 | > th | dose independent | rect. | 12 | 10 |
| 681 | 75.62 | temperature | 30.0 | 720 | < th | dose independent | rect. | 23 | 16 |
| 691 | 75.64 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 3 | 2 |
| 700 | 75.66 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 12 | 23 |
| 705 | 75.66 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 12 | 23 |
| 720 | 75.71 | temperature | 10.0 | 30 | > th | dose independent | rect. | 11 | 1 |
| 722 | 75.71 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 11 | 1 |
| 723 | 75.71 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 11 | 1 |
| 724 | 75.71 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 11 | 1 |
| 726 | 75.71 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 11 | 1 |
| 729 | 75.71 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 9 | 18 |
| 735 | 75.73 | wind | 1.0 | 30 | > th | dose independent | rect. | 11 | 1 |
| 739 | 75.73 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 3 | 15 |
| 746 | 75.74 | radiation | 40.0 | 10 | > th | dose dependent | sin | 8 | NA |
| 761 | 75.76 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 23 | 16 |
| 788 | 75.81 | humidity | 90.0 | 30 | < th | dose independent | rect. | 11 | 1 |
| 818 | 75.85 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 13 | 14 |
| 865 | 75.92 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 12 | 23 |
| 909 | 75.97 | temperature | 20.0 | 720 | > th | dose independent | rect. | 3 | 4 |
| 912 | 75.97 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 12 | 10 |
| 926 | 75.99 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 1 | 19 |
| 969 | 76.06 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 23 | 1 |
| 989 | 76.08 | temperature | 15.0 | 30 | > th | dose independent | rect. | 23 | 23 |
| 991 | 76.08 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 21 | 6 |