BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os07g0485100 Os07g0485100|AK060443
         (413 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G64370.1  | chr5:25739264-25741031 FORWARD LENGTH=409          674   0.0  
AT2G27450.2  | chr2:11737666-11739577 REVERSE LENGTH=327           85   7e-17

>AT5G64370.1 | chr5:25739264-25741031 FORWARD LENGTH=409
          Length = 408

 Score =  674 bits (1740), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 310/401 (77%), Positives = 353/401 (88%)

Query: 13  EDAPAAAAGSIGGYESLHRLLQSNLSPELFKEASRLLLGLNCGRALEAISLPEATSALAK 72
           E+   +A GSI GY+SLH+LL +NL PEL++E +RLLLG NCGR+LE I LPE+  AL+ 
Sbjct: 7   ENGETSAEGSICGYDSLHQLLSANLKPELYQEVNRLLLGRNCGRSLEQIVLPESAKALSS 66

Query: 73  AHNFDVQAFRFDADKEYLRQPRVIRVGLIQNSIAIPTTSHFADQKKAIMEKVKPMIDAAG 132
            H+FD+QA  F ADKE +R PRV+RVGLIQNSIA+PTT+ F+DQ + I +K+KP+IDAAG
Sbjct: 67  KHDFDLQAASFSADKEQMRNPRVVRVGLIQNSIALPTTAPFSDQTRGIFDKLKPIIDAAG 126

Query: 133 DAGVNILCLQEAWTMPFAFCTREKRWCEFAEPVDGESTQFLQQLAKKYNMVIVSPILERD 192
            AGVNILCLQEAWTMPFAFCTRE+RWCEFAEPVDGEST+FLQ+LAKKYNMVIVSPILERD
Sbjct: 127 VAGVNILCLQEAWTMPFAFCTRERRWCEFAEPVDGESTKFLQELAKKYNMVIVSPILERD 186

Query: 193 VNHGEIVWNTAVVXXXXXXXXXXXXXXXXPRVGDFNESTYYMEGNTGHPVFETAYGKIGV 252
           ++HGE++WNTAV+                PRVGDFNESTYYMEG+TGHPVFET +GKI V
Sbjct: 187 IDHGEVLWNTAVIIGNNGNIIGKHRKNHIPRVGDFNESTYYMEGDTGHPVFETVFGKIAV 246

Query: 253 NICYGRHHPLNWLAFGLNGAEIVFNPSATVGELSEPMWPIEARNAAIANSYFVGSINRVG 312
           NICYGRHHPLNWLAFGLNGAEIVFNPSATVGELSEPMWPIEARNAAIANSYFVGSINRVG
Sbjct: 247 NICYGRHHPLNWLAFGLNGAEIVFNPSATVGELSEPMWPIEARNAAIANSYFVGSINRVG 306

Query: 313 TEVFPNPFTSGDGKPQHADFGHFYGSSHFSAPDASCTPSLSRYRDGLMISDMDLNLCRQI 372
           TEVFPNPFTSGDGKPQH DFGHFYGSSHFSAPDASCTPSLSRY+DGL+ISDMDLNLCRQ 
Sbjct: 307 TEVFPNPFTSGDGKPQHNDFGHFYGSSHFSAPDASCTPSLSRYKDGLLISDMDLNLCRQY 366

Query: 373 KDKWGFRMTARYDTYASLLSEYLKPDFKPQVIVDPLINKSA 413
           KDKWGFRMTARY+ YA LL++Y+KPDFKPQV+ DPL++K++
Sbjct: 367 KDKWGFRMTARYEVYADLLAKYIKPDFKPQVVSDPLLHKNS 407



>AT2G27450.2 | chr2:11737666-11739577 REVERSE LENGTH=327
          Length = 326

 Score = 85.1 bits (209), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 73/275 (26%), Positives = 119/275 (43%), Gaps = 22/275 (8%)

Query: 127 MIDAAGDAGVNILCLQEAWTMPFAFCTREKR-WCEFAEPVDGEST-QFLQQLAKKYNMVI 184
           ++  A   G NI+ +QE +   + FC  ++  + + A+P     T   +Q+LAK+  +VI
Sbjct: 60  LVREAHAKGANIILIQELFE-GYYFCQAQREDFFKRAKPYKNHPTIARMQKLAKELGVVI 118

Query: 185 -VSPILERDVNHGEIVWNTAVVXXXXXXXXXXXXXXXXPRVGDFNESTYYMEGNTGHPVF 243
            VS   E +  H    +N+  +                P    + E  Y+  G+TG  VF
Sbjct: 119 PVSFFEEANTAH----YNSIAIIDADGTDLGIYRKSHIPDGPGYQEKFYFNPGDTGFKVF 174

Query: 244 ETAYGKIGVNICYGRHHPLNWLAFGLNGAEIVFNPSATVGEL------SEPMWPIEARNA 297
           +T + KIGV IC+ +  P    A  L GAEI+F P+A   E       S   W    +  
Sbjct: 175 QTKFAKIGVAICWDQWFPEAARAMVLQGAEILFYPTAIGSEPQDQGLDSRDHWRRVMQGH 234

Query: 298 AIANSYFVGSINRVGTEVFPNPFTSGDGKPQHADFGHFYGSSHFSAPDASCTPSLSRYRD 357
           A AN   + + NR+G E+      +  G  Q      FYG+S  + P            +
Sbjct: 235 AGANVVPLVASNRIGKEI----IETEHGPSQIT----FYGTSFIAGPTGEIVAEADDKSE 286

Query: 358 GLMISDMDLNLCRQIKDKWGFRMTARYDTYASLLS 392
            ++++  DL++ +  +  WG     R D Y  LL+
Sbjct: 287 AVLVAQFDLDMIKSKRQSWGVFRDRRPDLYKVLLT 321



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.319    0.135    0.414 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 9,183,296
Number of extensions: 379043
Number of successful extensions: 765
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 764
Number of HSP's successfully gapped: 2
Length of query: 413
Length of database: 11,106,569
Length adjustment: 101
Effective length of query: 312
Effective length of database: 8,337,553
Effective search space: 2601316536
Effective search space used: 2601316536
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 113 (48.1 bits)