BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0293400 Os02g0293400|AK072985
(349 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os02g0293400 Similar to Ubiquitin ligase SINAT5 (EC 6.3.2.-... 592 e-170
Os05g0238200 Similar to Ubiquitin ligase SINAT5 (EC 6.3.2.-... 540 e-154
Os01g0234900 Similar to Ubiquitin ligase SINAT5 (EC 6.3.2.-... 539 e-153
Os03g0356414 Similar to Ubiquitin ligase SINAT5 (EC 6.3.2.-... 469 e-133
Os07g0659800 Similar to Ubiquitin ligase SINAT5 (EC 6.3.2.-... 462 e-130
Os02g0128800 Seven in absentia protein family protein 439 e-123
Os06g0311300 Seven in absentia protein family protein 89 5e-18
Os01g0123700 86 4e-17
Os01g0121900 Seven in absentia protein family protein 78 8e-15
Os01g0761900 Seven in absentia protein family protein 77 1e-14
Os01g0125000 74 2e-13
Os05g0152600 73 4e-13
Os01g0123500 Seven in absentia protein family protein 72 8e-13
Os05g0152900 Seven in absentia protein family protein 69 4e-12
Os05g0152500 68 1e-11
>Os02g0293400 Similar to Ubiquitin ligase SINAT5 (EC 6.3.2.-) (Seven in absentia
homolog 5). Splice isoform 2
Length = 349
Score = 592 bits (1527), Expect = e-170, Method: Compositional matrix adjust.
Identities = 288/349 (82%), Positives = 288/349 (82%)
Query: 1 MDMASIECXXXXXXXXXXXXXXXXXXXXXHLPRPILVKXXXXXXXXXXXXXXXXXXXXXX 60
MDMASIEC HLPRPILVK
Sbjct: 1 MDMASIECVSYSDSMDDDDDDGVGVGGVSHLPRPILVKPSSAAAAVNVVVVSAGSGGGAG 60
Query: 61 XXXXXXXXXXXXXXXXXXTSVHELLECPVCTNSMYPPIHQCQNGHTLCSTCKTRVHNRCP 120
TSVHELLECPVCTNSMYPPIHQCQNGHTLCSTCKTRVHNRCP
Sbjct: 61 GGGGGVGVVAGAPAVPPATSVHELLECPVCTNSMYPPIHQCQNGHTLCSTCKTRVHNRCP 120
Query: 121 TCRQELGDIRCLALEKVAESLELPCKYYSLGCPEIFPYYSKLKHESQCNFRPYNCPYAGS 180
TCRQELGDIRCLALEKVAESLELPCKYYSLGCPEIFPYYSKLKHESQCNFRPYNCPYAGS
Sbjct: 121 TCRQELGDIRCLALEKVAESLELPCKYYSLGCPEIFPYYSKLKHESQCNFRPYNCPYAGS 180
Query: 181 ECSVVGDIPFLVAHLRDDHKVDMHSGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCL 240
ECSVVGDIPFLVAHLRDDHKVDMHSGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCL
Sbjct: 181 ECSVVGDIPFLVAHLRDDHKVDMHSGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCL 240
Query: 241 HFEAFQLGVAPVYMAFLRFMGDENDARNYSYSLEVGANGRKMIWEGTPRSIRDSHRKVRD 300
HFEAFQLGVAPVYMAFLRFMGDENDARNYSYSLEVGANGRKMIWEGTPRSIRDSHRKVRD
Sbjct: 241 HFEAFQLGVAPVYMAFLRFMGDENDARNYSYSLEVGANGRKMIWEGTPRSIRDSHRKVRD 300
Query: 301 SHDGLIIQRNMALFFSGGERKELKLRVTGRIWKEQQNPDSGACIPNLFS 349
SHDGLIIQRNMALFFSGGERKELKLRVTGRIWKEQQNPDSGACIPNLFS
Sbjct: 301 SHDGLIIQRNMALFFSGGERKELKLRVTGRIWKEQQNPDSGACIPNLFS 349
>Os05g0238200 Similar to Ubiquitin ligase SINAT5 (EC 6.3.2.-) (Seven in absentia
homolog 5)
Length = 361
Score = 540 bits (1391), Expect = e-154, Method: Compositional matrix adjust.
Identities = 254/271 (93%), Positives = 264/271 (97%), Gaps = 1/271 (0%)
Query: 79 TSVHELLECPVCTNSMYPPIHQCQNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVA 138
TSVHELLECPVCTNSM+PPIHQCQNGHTLCSTCK RVHNRCPTCRQELGDIRCLALEKVA
Sbjct: 92 TSVHELLECPVCTNSMFPPIHQCQNGHTLCSTCKARVHNRCPTCRQELGDIRCLALEKVA 151
Query: 139 ESLELPCKYYSLGCPEIFPYYSKLKHESQCNFRPYNCPYAGSECSVVGDIPFLVAHLRDD 198
ESLELPCKY SLGCPEIFPYYSK+KHE+QC+FRPYNCPYAGSEC+V GDIPFLVAHLRDD
Sbjct: 152 ESLELPCKYCSLGCPEIFPYYSKIKHEAQCSFRPYNCPYAGSECAVAGDIPFLVAHLRDD 211
Query: 199 HKVDMHSGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGVAPVYMAFLR 258
HKVDMHSGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLG+APVYMAFLR
Sbjct: 212 HKVDMHSGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLR 271
Query: 259 FMGDENDARNYSYSLEVGANGRKMIWEGTPRSIRDSHRKVRDSHDGLIIQRNMALFFSGG 318
FMGDEN+ARNY+YSLEVG NGRKM+WEGTPRSIRDSHRKVRDSHDGLIIQRNMALFFSGG
Sbjct: 272 FMGDENEARNYTYSLEVGGNGRKMVWEGTPRSIRDSHRKVRDSHDGLIIQRNMALFFSGG 331
Query: 319 ERKELKLRVTGRIWKEQQNPDSGACIPNLFS 349
+RKELKLRVTGRIWKEQ NPD GACIPNL S
Sbjct: 332 DRKELKLRVTGRIWKEQTNPD-GACIPNLCS 361
>Os01g0234900 Similar to Ubiquitin ligase SINAT5 (EC 6.3.2.-) (Seven in absentia
homolog 5). Splice isoform 2
Length = 347
Score = 539 bits (1389), Expect = e-153, Method: Compositional matrix adjust.
Identities = 253/269 (94%), Positives = 263/269 (97%), Gaps = 1/269 (0%)
Query: 81 VHELLECPVCTNSMYPPIHQCQNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAES 140
VHELLECPVCTNSMYPPIHQCQNGHTLCSTCK RVHNRCPTCRQELGDIRCLALEKVAES
Sbjct: 80 VHELLECPVCTNSMYPPIHQCQNGHTLCSTCKARVHNRCPTCRQELGDIRCLALEKVAES 139
Query: 141 LELPCKYYSLGCPEIFPYYSKLKHESQCNFRPYNCPYAGSECSVVGDIPFLVAHLRDDHK 200
LELPCKY SLGCPEIFPYYSK+KHE+QC FRPYNCPYAGSEC+VVGDIP+LVAHLRDDHK
Sbjct: 140 LELPCKYCSLGCPEIFPYYSKIKHEAQCMFRPYNCPYAGSECAVVGDIPYLVAHLRDDHK 199
Query: 201 VDMHSGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGVAPVYMAFLRFM 260
VDMHSGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLG+APVYMAFLRFM
Sbjct: 200 VDMHSGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFM 259
Query: 261 GDENDARNYSYSLEVGANGRKMIWEGTPRSIRDSHRKVRDSHDGLIIQRNMALFFSGGER 320
GDEN+ARNYSYSLEVGANGRKM+WEGTPRS+RDSHRKVRDSHDGLIIQRNMALFFSGG+R
Sbjct: 260 GDENEARNYSYSLEVGANGRKMVWEGTPRSVRDSHRKVRDSHDGLIIQRNMALFFSGGDR 319
Query: 321 KELKLRVTGRIWKEQQNPDSGACIPNLFS 349
KELKLR+TGRIWKEQQ PD GACIPNL S
Sbjct: 320 KELKLRITGRIWKEQQTPD-GACIPNLCS 347
>Os03g0356414 Similar to Ubiquitin ligase SINAT5 (EC 6.3.2.-) (Seven in absentia
homolog 5). Splice isoform 2
Length = 301
Score = 469 bits (1208), Expect = e-133, Method: Compositional matrix adjust.
Identities = 217/257 (84%), Positives = 236/257 (91%)
Query: 79 TSVHELLECPVCTNSMYPPIHQCQNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVA 138
+SV ELLECPVC ++MYPPIHQC NGHTLCS CK RVHNRCPTCR ELG+IRCLALEKVA
Sbjct: 45 SSVRELLECPVCLSAMYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVA 104
Query: 139 ESLELPCKYYSLGCPEIFPYYSKLKHESQCNFRPYNCPYAGSECSVVGDIPFLVAHLRDD 198
SLELPCKY + GC I+PYY KLKHESQC +RPY+CPYAGSEC+V GDIP+LV HL+DD
Sbjct: 105 ASLELPCKYQNFGCVGIYPYYCKLKHESQCQYRPYSCPYAGSECTVAGDIPYLVNHLKDD 164
Query: 199 HKVDMHSGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGVAPVYMAFLR 258
HKVDMH+GCTFNHRYVKSNP EVENATWMLTVF CFGQYFCLHFEAFQLG+APVY+AFLR
Sbjct: 165 HKVDMHNGCTFNHRYVKSNPHEVENATWMLTVFSCFGQYFCLHFEAFQLGMAPVYIAFLR 224
Query: 259 FMGDENDARNYSYSLEVGANGRKMIWEGTPRSIRDSHRKVRDSHDGLIIQRNMALFFSGG 318
FMGD+ +A+NYSYSLEVG GRKMIW+G PRSIRDSHRKVRDS+DGLIIQRNMALFFSGG
Sbjct: 225 FMGDDLEAKNYSYSLEVGGTGRKMIWQGVPRSIRDSHRKVRDSYDGLIIQRNMALFFSGG 284
Query: 319 ERKELKLRVTGRIWKEQ 335
ERKELKLRVTGRIWKEQ
Sbjct: 285 ERKELKLRVTGRIWKEQ 301
>Os07g0659800 Similar to Ubiquitin ligase SINAT5 (EC 6.3.2.-) (Seven in absentia
homolog 5). Splice isoform 2
Length = 302
Score = 462 bits (1188), Expect = e-130, Method: Compositional matrix adjust.
Identities = 212/256 (82%), Positives = 233/256 (91%)
Query: 80 SVHELLECPVCTNSMYPPIHQCQNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAE 139
+V ELLECPVC N+MYPPIHQC NGHTLCS CK RVHNRCPTCR ELG+IRCLALEKVA
Sbjct: 47 NVRELLECPVCLNAMYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAA 106
Query: 140 SLELPCKYYSLGCPEIFPYYSKLKHESQCNFRPYNCPYAGSECSVVGDIPFLVAHLRDDH 199
SLELPCKY + GC I+PYY KLKHESQC +RPY CPYAGSEC+V GDI +LV+HL+DDH
Sbjct: 107 SLELPCKYQNFGCLGIYPYYCKLKHESQCQYRPYTCPYAGSECTVAGDIQYLVSHLKDDH 166
Query: 200 KVDMHSGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGVAPVYMAFLRF 259
KVDMH+G TFNHRYVKSNP EVENATWMLTVF CFGQYFCLHFEAFQLG+APVY+AFLRF
Sbjct: 167 KVDMHNGSTFNHRYVKSNPHEVENATWMLTVFSCFGQYFCLHFEAFQLGMAPVYIAFLRF 226
Query: 260 MGDENDARNYSYSLEVGANGRKMIWEGTPRSIRDSHRKVRDSHDGLIIQRNMALFFSGGE 319
MGD+ +A+NYSYSLEVG +GRKM W+G PRSIRDSHRKVRDS+DGLIIQRNMALFFSGG+
Sbjct: 227 MGDDAEAKNYSYSLEVGGSGRKMTWQGVPRSIRDSHRKVRDSYDGLIIQRNMALFFSGGD 286
Query: 320 RKELKLRVTGRIWKEQ 335
+KELKLRVTGRIWKEQ
Sbjct: 287 KKELKLRVTGRIWKEQ 302
>Os02g0128800 Seven in absentia protein family protein
Length = 308
Score = 439 bits (1128), Expect = e-123, Method: Compositional matrix adjust.
Identities = 203/257 (78%), Positives = 227/257 (88%)
Query: 79 TSVHELLECPVCTNSMYPPIHQCQNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVA 138
T +++LLECPVCTNSM PPI QC NGHT+CS CK RV N CPTCRQELG+IRCLALEKVA
Sbjct: 52 TGLNDLLECPVCTNSMRPPILQCPNGHTICSNCKHRVENHCPTCRQELGNIRCLALEKVA 111
Query: 139 ESLELPCKYYSLGCPEIFPYYSKLKHESQCNFRPYNCPYAGSECSVVGDIPFLVAHLRDD 198
ESL+LPCKY SLGC EI PY +KLKHE C FRPY+CPYAGSEC + GD+P LV+HL +D
Sbjct: 112 ESLQLPCKYQSLGCAEIHPYQNKLKHEELCRFRPYSCPYAGSECLIAGDVPMLVSHLIND 171
Query: 199 HKVDMHSGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGVAPVYMAFLR 258
HKVD+H GCTFNHRYVKSNP EVENATWMLTVF CFGQ+FCLHFEAF LG+APVYMAFLR
Sbjct: 172 HKVDLHEGCTFNHRYVKSNPYEVENATWMLTVFKCFGQHFCLHFEAFLLGMAPVYMAFLR 231
Query: 259 FMGDENDARNYSYSLEVGANGRKMIWEGTPRSIRDSHRKVRDSHDGLIIQRNMALFFSGG 318
FMG++++ARN+ YSLEVG NGRK+ W+G PRSIRDSH+KVRDS DGLII RNMALFFSGG
Sbjct: 232 FMGEDSEARNFCYSLEVGGNGRKLTWQGIPRSIRDSHKKVRDSFDGLIIHRNMALFFSGG 291
Query: 319 ERKELKLRVTGRIWKEQ 335
R+ELKLRVTGRIWKEQ
Sbjct: 292 NRQELKLRVTGRIWKEQ 308
>Os06g0311300 Seven in absentia protein family protein
Length = 321
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 69/139 (49%), Gaps = 9/139 (6%)
Query: 83 ELLECPVCTNSMYPPIHQCQNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAESLE 142
++L+C +C S+ PP++QCQNGH C +C +++ N+C C ++ R +ALEK+ ES++
Sbjct: 83 DVLDCSICFESLRPPLYQCQNGHVACFSCWSKLSNKCHICSRDAKFARNIALEKIVESIK 142
Query: 143 LPCKYYSLGCPEIFPYYSKLKHESQCNFRPYNCPYAGSECSVVGDIPFLVAHLRDDHKVD 202
C Y GC + Y + HE C F P CP S C G H H D
Sbjct: 143 SSCSYAKWGCCKFINYAQRDAHEEACLFAPSVCPI--SNCGYRGFTGRWSGHFLTSHSSD 200
Query: 203 MHSGCTFNHRYVKSNPREV 221
+ R++ P EV
Sbjct: 201 V-------MRFIYGQPFEV 212
>Os01g0123700
Length = 292
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 73/137 (53%), Gaps = 16/137 (11%)
Query: 83 ELLECPVCTNSMYPPIHQCQNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAESLE 142
+ LECP+C ++ C+NGH C +C +++ CP C + +G+IRC LEKV ++
Sbjct: 44 DALECPICFVPFEDRVYMCKNGHAACGSCYAKMNTMCPCCIEPIGNIRCRPLEKVLAAMS 103
Query: 143 LPCKYYS---------LGCPEIFPYYSKLKHESQCNFRPYNCPYAGSECSVVGDIPFLVA 193
PC++ + GC EI Y + HE+ C P CP+ G C+ G + L +
Sbjct: 104 APCRFSTSAYMRLIRASGCTEIVAYTERRNHEASCPHAPCVCPFDG--CNYQGHL--LYS 159
Query: 194 HLRDDHKVD---MHSGC 207
H++D+H D + +GC
Sbjct: 160 HIQDEHATDAAVVATGC 176
>Os01g0121900 Seven in absentia protein family protein
Length = 651
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 58/119 (48%), Gaps = 3/119 (2%)
Query: 83 ELLECPVCTNSMYPPIHQC-QNGHTLCSTCKTRVHNRCPTCRQ-ELGDIRCLALEKVAES 140
E+LEC VC + PP++QC + GH CSTC + C CR E RC A+E +
Sbjct: 49 EVLECDVCFGPLTPPLYQCMRRGHITCSTCVAEMGQECQWCRAPEATTTRCRAMEHFLAA 108
Query: 141 LELPCKYYSLGCPEIFPYYSKLKHESQCNFRPYNCPYAGSECSVVGDIPFLVAHLRDDH 199
L +PC + GC + PY + HE+ C P CP G S + LV HL H
Sbjct: 109 LAVPCSFNHKGCAAMVPYGEREAHEAACAHSPCYCPIRGCSSSPYSGV-SLVEHLERKH 166
>Os01g0761900 Seven in absentia protein family protein
Length = 279
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 58/119 (48%), Gaps = 4/119 (3%)
Query: 83 ELLECPVCTNSMYPPIHQCQNGHTLCSTCKTRV--HNRCPTCRQELGDIRCLALEKVAES 140
E+L+C VC + + PP+ QC GH +CS+C ++ NRC C + RC A+E++ S
Sbjct: 20 EVLDCTVCCHPLKPPVLQCGVGHVICSSCHGKLPDKNRCHVCAMDTAYNRCFAVEQILRS 79
Query: 141 LELPCKYYSLGCPEIFPYYSKLKHESQCNFRPYNCPYAGSECSVVGDIPFLVAHLRDDH 199
+ +PC+ GC Y+ HE C P CP G C G L AH H
Sbjct: 80 ILVPCRNAGYGCDAKTAYHDSDSHEDGCPHAPCFCPEPG--CGFAGATSSLPAHFTGGH 136
>Os01g0125000
Length = 399
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 54/100 (54%), Gaps = 3/100 (3%)
Query: 83 ELLECPVCTNSMYPPIHQCQNGHTLCSTCKTRV--HNRCPTCR-QELGDIRCLALEKVAE 139
E+L CPVC + PP+ QC GH +CS C+ + +CP+ +RC+A+E+V
Sbjct: 35 EVLHCPVCFQILRPPVFQCDLGHLVCSPCRDNLPAGGKCPSPSCFGTPSVRCVAMERVVN 94
Query: 140 SLELPCKYYSLGCPEIFPYYSKLKHESQCNFRPYNCPYAG 179
S+E+ C Y GCP+ Y + +HE C P CP G
Sbjct: 95 SVEVACAYAEHGCPDKIAYANITEHEKTCPHAPCFCPEPG 134
>Os05g0152600
Length = 342
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 72/156 (46%), Gaps = 13/156 (8%)
Query: 83 ELLECPVCTNSMYPPIHQCQNGHTLCSTCKTRV--HNRCPTCRQELGD---IRCLALEKV 137
+ LEC VC + PPI QC+ GH +CS C+ ++ RC CR + RC ALE++
Sbjct: 71 DALECGVCFLPLRPPIFQCEVGHVVCSPCRDKLAPAGRCHVCRVAVAGGEYRRCYALERL 130
Query: 138 AESLELPCKYYSLGCPEIFPYYSKLKHESQCNFRPYNCPYAGSECSVVGDIPFLVAHLRD 197
+++ + C + + GC Y++ H C P +CP G C VG L
Sbjct: 131 VDAIRVACPHAAHGCGATPAYHALDAHRRACPHAPCHCP--GERCGFVGSTVAL-----Q 183
Query: 198 DHKVDMHS-GCTFNHRYVKSNPREVENATWMLTVFH 232
DH HS CT N R ++ + + L V H
Sbjct: 184 DHIAATHSWPCTTNVRAGETVSVHLRDGLAFLRVHH 219
>Os01g0123500 Seven in absentia protein family protein
Length = 282
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 49/84 (58%), Gaps = 4/84 (4%)
Query: 119 CPTCRQELGDIRCLALEKVAESLELPCKYYSLGCPEIFPYYSKLKHESQCNFRPYNCPYA 178
CP+C + +GDIRC LEKV ++ PCK+ + GC E + +L HE+ C P CP+
Sbjct: 77 CPSCNEPIGDIRCRPLEKVLAAMSAPCKFRASGCMETVGFTERLSHEASCTHAPCGCPFD 136
Query: 179 GSECSVVGDIPFLVAHLRDDHKVD 202
G C+ +G + L H+ D+H D
Sbjct: 137 G--CTYLGLL--LYNHILDEHATD 156
>Os05g0152900 Seven in absentia protein family protein
Length = 387
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 58/122 (47%), Gaps = 7/122 (5%)
Query: 83 ELLECPVCTNSMYPPIHQCQNGHTLCSTCKTRV--HNRCPTCRQELGD---IRCLALEKV 137
+ LEC VC + PPI QC+ GH +C+ C+ ++ RC CR + RC ALE++
Sbjct: 132 DALECGVCCLPLRPPIFQCEVGHVVCAPCRDKLAPAGRCHVCRAAVAGGEYRRCHALERL 191
Query: 138 AESLELPCKYYSLGCPEIFPYYSKLKHESQCNFRPYNCPYAGSECSVVGDIPFLVAHLRD 197
+++ + C + + GC Y++ H C P CP G C G L+ H
Sbjct: 192 VDAIRVACPHAAHGCGATPAYHALDAHRRACPHAPCRCP--GESCGFAGSTAALLDHFAA 249
Query: 198 DH 199
H
Sbjct: 250 AH 251
>Os05g0152500
Length = 384
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 58/123 (47%), Gaps = 7/123 (5%)
Query: 83 ELLECPVCTNSMYPPIHQCQNGHTLCSTCKTRV--HNRCPTCRQELGD---IRCLALEKV 137
+ LEC VC + PPI QC+ GH +C+ C+ + RC CR + RC ALE++
Sbjct: 129 DALECGVCFLLLRPPIFQCEVGHVVCAPCRDTLAPAGRCYVCRVAVAGGEYRRCYALERL 188
Query: 138 AESLELPCKYYSLGCPEIFPYYSKLKHESQCNFRPYNCPYAGSECSVVGDIPFLVAHLRD 197
+++ + C + + GC Y+ H C P +CP G C VG L+ H
Sbjct: 189 VDAIRVACPHAAHGCAARPAYHDVEAHRLACPHGPCHCP--GERCGFVGSTAALLDHFAA 246
Query: 198 DHK 200
H
Sbjct: 247 THN 249
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.325 0.139 0.459
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 10,998,534
Number of extensions: 442841
Number of successful extensions: 1347
Number of sequences better than 1.0e-10: 16
Number of HSP's gapped: 1343
Number of HSP's successfully gapped: 16
Length of query: 349
Length of database: 17,035,801
Length adjustment: 102
Effective length of query: 247
Effective length of database: 11,709,973
Effective search space: 2892363331
Effective search space used: 2892363331
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 156 (64.7 bits)