BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0218700 Os02g0218700|AK107161
(500 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os02g0218700 Similar to Allene oxide synthase (EC 4.2.1.92) 896 0.0
Os02g0218800 Similar to Allene oxide synthase (EC 4.2.1.92) 764 0.0
Os03g0767000 Similar to Allene oxide synthase (EC 4.2.1.92) 363 e-100
Os03g0225900 Allene oxide synthase 362 e-100
Os02g0110200 Similar to Hydroperoxide lyase 306 3e-83
>Os02g0218700 Similar to Allene oxide synthase (EC 4.2.1.92)
Length = 500
Score = 896 bits (2315), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 451/500 (90%), Positives = 451/500 (90%)
Query: 1 MAPPPVNSGDAAAAATGEKSKLSPSGLPIREIPGGYGVPFFSPLRDRLDYFYFQGAEEYF 60
MAPPPVNSGDAAAAATGEKSKLSPSGLPIREIPGGYGVPFFSPLRDRLDYFYFQGAEEYF
Sbjct: 1 MAPPPVNSGDAAAAATGEKSKLSPSGLPIREIPGGYGVPFFSPLRDRLDYFYFQGAEEYF 60
Query: 61 RSRVARHGGATVLRVNMPPGPFISGNPRVVALLDARSFRVLLDDSMVDKADTLDGTYMPS 120
RSRVARHGGATVLRVNMPPGPFISGNPRVVALLDARSFRVLLDDSMVDKADTLDGTYMPS
Sbjct: 61 RSRVARHGGATVLRVNMPPGPFISGNPRVVALLDARSFRVLLDDSMVDKADTLDGTYMPS 120
Query: 121 RALFGGHRPLAFLDAADPRHAKIKRVVMSLAAARMHHVXXXXXXXXXXXXXXXXXGLGAA 180
RALFGGHRPLAFLDAADPRHAKIKRVVMSLAAARMHHV GLGAA
Sbjct: 121 RALFGGHRPLAFLDAADPRHAKIKRVVMSLAAARMHHVAPAFRAAFAAMFDAVEAGLGAA 180
Query: 181 VEFNKLNMRYMLDFTCAALFGGEPPSKVVGDGAVTKAMAWLAFQLHPIASKVVKPWPLEE 240
VEFNKLNMRYMLDFTCAALFGGEPPSKVVGDGAVTKAMAWLAFQLHPIASKVVKPWPLEE
Sbjct: 181 VEFNKLNMRYMLDFTCAALFGGEPPSKVVGDGAVTKAMAWLAFQLHPIASKVVKPWPLEE 240
Query: 241 LLLHTFSLPPFLVRRGXXXXXXXXXXXXXXXXXXXEKSHTGIPRDELLDNLVFVAIFNAF 300
LLLHTFSLPPFLVRRG EKSHTGIPRDELLDNLVFVAIFNAF
Sbjct: 241 LLLHTFSLPPFLVRRGYADLKAYFADAAAAVLDDAEKSHTGIPRDELLDNLVFVAIFNAF 300
Query: 301 GGFKIFLPHIVKWLARAGPELHAKLATEVRATVPTGEDDGITLAAVERMPLVKSVVWEAL 360
GGFKIFLPHIVKWLARAGPELHAKLATEVRATVPTGEDDGITLAAVERMPLVKSVVWEAL
Sbjct: 301 GGFKIFLPHIVKWLARAGPELHAKLATEVRATVPTGEDDGITLAAVERMPLVKSVVWEAL 360
Query: 361 RMNPPVEFQYGHARRDMVVESHDAAYEVRKGEMLFGYQPLATRDEKVFDRAGEFVADRFV 420
RMNPPVEFQYGHARRDMVVESHDAAYEVRKGEMLFGYQPLATRDEKVFDRAGEFVADRFV
Sbjct: 361 RMNPPVEFQYGHARRDMVVESHDAAYEVRKGEMLFGYQPLATRDEKVFDRAGEFVADRFV 420
Query: 421 AGGAAGDRPLLEHVVWSNGPETRAPSEGNKQCPGKDMVVAVGRLMVAELFRRYDTFXXXX 480
AGGAAGDRPLLEHVVWSNGPETRAPSEGNKQCPGKDMVVAVGRLMVAELFRRYDTF
Sbjct: 421 AGGAAGDRPLLEHVVWSNGPETRAPSEGNKQCPGKDMVVAVGRLMVAELFRRYDTFAADV 480
Query: 481 XXXXXXXXXTFTSLTRASSG 500
TFTSLTRASSG
Sbjct: 481 VEAPVEPVVTFTSLTRASSG 500
>Os02g0218800 Similar to Allene oxide synthase (EC 4.2.1.92)
Length = 510
Score = 764 bits (1972), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/503 (77%), Positives = 413/503 (82%), Gaps = 4/503 (0%)
Query: 1 MAPPPVNSGDAAAAATGEKSKLSPSGLPIREIPGGYGVPFFSPLRDRLDYFYFQGAEEYF 60
MAPP NSGD A G +SKLSPSGL IREIPGGYGVPF SPLRDRLDY+YFQGA+E+F
Sbjct: 1 MAPPRANSGDGNDGAVGGQSKLSPSGLLIREIPGGYGVPFLSPLRDRLDYYYFQGADEFF 60
Query: 61 RSRVARHGGATVLRVNMPPGPFISGNPRVVALLDARSFRVLLDDSMVDKADTLDGTYMPS 120
RSRVARHGGATVLRVNMPPGPF++G+PRVVALLDARSFRVLLDDSMVDKADTLDGT+MPS
Sbjct: 61 RSRVARHGGATVLRVNMPPGPFLAGDPRVVALLDARSFRVLLDDSMVDKADTLDGTFMPS 120
Query: 121 RALFGGHRPLAFLDAADPRHAKIKRVVMSLAAARMHHVXXXXXXXXXXXXXXXXXGL--G 178
ALFGGHRPLAFLDAADPRHAKIKRVVMSLAAARMHHV GL G
Sbjct: 121 LALFGGHRPLAFLDAADPRHAKIKRVVMSLAAARMHHVAPAFRAAFAAMFDEVDAGLVAG 180
Query: 179 AAVEFNKLNMRYMLDFTCAALFGGEPPSKVVGDGAVTKAMAWLAFQLHPIASKVVKPWPL 238
VEFNKLNMRYMLDFTCAALFGG PPSK +GD AVTKA+ WL FQLHP+ASKVVKPWPL
Sbjct: 181 GPVEFNKLNMRYMLDFTCAALFGGAPPSKAMGDAAVTKAVKWLIFQLHPLASKVVKPWPL 240
Query: 239 EELLLHTFSLPPFLVRRGXXXXXXXXXXXXXXXXXXXEKSHTGIPRDELLDNLVFVAIFN 298
E+LLLHTF LPPFLVRR EK+H GIPRDELL NLVFVA+FN
Sbjct: 241 EDLLLHTFRLPPFLVRREYGEITAYFAAAAAAILDDAEKNHPGIPRDELLHNLVFVAVFN 300
Query: 299 AFGGFKIFLPHIVKWLARAGPELHAKLATEVRATVPTGEDDGITLAAVER-MPLVKSVVW 357
A+GGFKIFLPHIVKWLARAGPELHAKLA+EVRA P G + IT++AVE+ MPLVKSVVW
Sbjct: 301 AYGGFKIFLPHIVKWLARAGPELHAKLASEVRAAAPAGGGE-ITISAVEKEMPLVKSVVW 359
Query: 358 EALRMNPPVEFQYGHARRDMVVESHDAAYEVRKGEMLFGYQPLATRDEKVFDRAGEFVAD 417
EALRMNPPVEFQYG ARRDMVVESHDAAYEVRKGE+LFGYQPLATRDEKVFDRAGEFV D
Sbjct: 360 EALRMNPPVEFQYGRARRDMVVESHDAAYEVRKGELLFGYQPLATRDEKVFDRAGEFVPD 419
Query: 418 RFVAGGAAGDRPLLEHVVWSNGPETRAPSEGNKQCPGKDMVVAVGRLMVAELFRRYDTFX 477
RFV+G + RPLLEHVVWSNGPET PSEGNKQCPGKDMVVAVGRLMVA LFRRYDTF
Sbjct: 420 RFVSGAGSAARPLLEHVVWSNGPETGTPSEGNKQCPGKDMVVAVGRLMVAGLFRRYDTFA 479
Query: 478 XXXXXXXXXXXXTFTSLTRASSG 500
TFTSLTRA+ G
Sbjct: 480 ADVEELPLEPVVTFTSLTRAADG 502
>Os03g0767000 Similar to Allene oxide synthase (EC 4.2.1.92)
Length = 512
Score = 363 bits (932), Expect = e-100, Method: Compositional matrix adjust.
Identities = 222/494 (44%), Positives = 291/494 (58%), Gaps = 16/494 (3%)
Query: 11 AAAAATGEKSKLSPSG-LPIREIPGGYGVPFFSPLRDRLDYFYFQGAEE-YFRSRVARHG 68
A+A+AT + +SP LP+R++PG YG P +RDR +YFY G + +F +RV H
Sbjct: 28 ASASATDRQEVVSPKRRLPLRKVPGDYGPPVVGAIRDRYEYFYGPGGRDGFFAARVRAHR 87
Query: 69 GATVLRVNMPPGPFISGNPRVVALLDARSFRVLLDDSMVDKADTLDGTYMPSRALFGGHR 128
+TV+R+NMPPGPF++ +PRVVALLDA SF VL D S+VDK D GT+MPS L GG+R
Sbjct: 88 -STVVRLNMPPGPFVARDPRVVALLDAASFPVLFDTSLVDKTDLFTGTFMPSTDLTGGYR 146
Query: 129 PLAFLDAADPRHAKIKRVVMSLAAARMHHVXXXXXXXXXXXXXXXXXGLG--AAVEFNKL 186
L++LD ++P HA +K ++ L + R V L +F
Sbjct: 147 VLSYLDPSEPNHAPLKTLLFYLLSHRRQQVIPKFREVYGDLFGLMENDLARVGKADFGVH 206
Query: 187 NMRYMLDFTCAALFGGEPPSKVVGDGAVTKAMAWLAFQLHPIASKVVKPWPLEELLLHTF 246
N F C L G +P +G W+ FQL P+ S + +E+ LLH+
Sbjct: 207 NDAAAFGFLCQGLLGRDPAKSALGRDGPKLITKWVLFQLSPLLSLGLPTL-VEDTLLHSL 265
Query: 247 SLPPFLVRRGXXXXXXXXXXXXXXXXXXXEKSHTGIPRDELLDNLVFVAIFNAFGGFKIF 306
LPP LV++ E+ GI R+E + N++F FN+FGG KI
Sbjct: 266 RLPPALVKKDYDRLADFFRDAAKAVVDEGER--LGIAREEAVHNILFALCFNSFGGMKIL 323
Query: 307 LPHIVKWLARAGPELHAKLATEVRATVPTGEDDG--ITLAAVERMPLVKSVVWEALRMNP 364
P +VKWL RAG +H +LATEVR V D+G +T+ A+ MPLVKS V+EALR+ P
Sbjct: 324 FPTLVKWLGRAGARVHGRLATEVRGAV---RDNGGEVTMKALAEMPLVKSAVYEALRIEP 380
Query: 365 PVEFQYGHARRDMVVESHDAAYEVRKGEMLFGYQPLATRDEKVFDRAGEFVADRFVAGGA 424
PV QYG A+RDMVVESHD YEVR+GEMLFGYQP+AT+D +VF R E+V DRF+ G
Sbjct: 381 PVAMQYGRAKRDMVVESHDYGYEVREGEMLFGYQPMATKDPRVFARPEEYVPDRFL--GE 438
Query: 425 AGDRPLLEHVVWSNGPETRAPSEGNKQCPGKDMVVAVGRLMVAELFRRYDTFXXXXXXXX 484
G R LL HVVWSNGPET AP+ +KQC GKD VV V RL++ ELF RYD+F
Sbjct: 439 DGAR-LLRHVVWSNGPETAAPTLHDKQCAGKDFVVLVARLLLVELFLRYDSFDVEVGTST 497
Query: 485 XXXXXTFTSLTRAS 498
T TSL +A+
Sbjct: 498 LGSSVTVTSLKKAT 511
>Os03g0225900 Allene oxide synthase
Length = 478
Score = 362 bits (928), Expect = e-100, Method: Compositional matrix adjust.
Identities = 218/455 (47%), Positives = 291/455 (63%), Gaps = 13/455 (2%)
Query: 27 LPIREIPGGYGVPFFSPLRDRLDYFYFQGAEEYFRSRVARHGGATVLRVNMPPGPFISGN 86
LP R +PG YGVPF S +RDRLD++Y QG ++YF SR R+G +TV+R+N+PPGPF++ +
Sbjct: 7 LPRRPVPGSYGVPFVSAVRDRLDFYYLQGQDKYFESRAERYG-STVVRINVPPGPFMARD 65
Query: 87 PRVVALLDARSFRVLLDDSMVDKADTLDGTYMPSRALFGGHRPLAFLDAADPRHAKIKRV 146
PRVVALLDA+SF VL D + V+K D GT+MPS +L GG+R A+LD ++P HAKIK++
Sbjct: 66 PRVVALLDAKSFPVLFDVAKVEKRDVFTGTFMPSTSLTGGYRVCAYLDPSEPNHAKIKQL 125
Query: 147 VMSLAAARMHH---VXXXXXXXXXXXXXXXXXGLGAAVEFNKLNMRYMLDFTCAALFGGE 203
++SL +R V G +F LN +F A FG
Sbjct: 126 LLSLLVSRKDAFVPVFRSNFGALLDTVESQLASGGGKSDFTALNDATSFEFIGEAYFGVR 185
Query: 204 PP-SKVVGDGAVTKAMAWLAFQLHPIASKVVKPWPLEELLLHTFSLPPFLVRRGXXXXXX 262
P S +G G TKA WL +QL P+ + + P +E+ LLHT LPPFL+
Sbjct: 186 PSASSSLGTGGPTKAALWLLWQLAPLTT-LGLPMIIEDPLLHTLPLPPFLISSDYKALYA 244
Query: 263 XXXXXXXXXXXXXEKSHTGIPRDELLDNLVFVAIFNAFGGFKIFLPHIVKWLARAGPELH 322
E G+ R+E NL+F +FN++GGFK+ LP I+ +A+AG +LH
Sbjct: 245 YFAAAASQALDAAE--GLGLSREEACHNLLFATVFNSYGGFKLLLPQILSRVAQAGEKLH 302
Query: 323 AKLATEVRATVPTGEDDGITLAAVERMPLVKSVVWEALRMNPPVEFQYGHARRDMVVESH 382
+LA E+R+ V + +TLAA+E+M L +SVVWEALR++PPV FQYG A+ D+ +ESH
Sbjct: 303 ERLAAEIRSAVADAGGN-VTLAALEKMELTRSVVWEALRLDPPVRFQYGRAKADLEIESH 361
Query: 383 DAAYEVRKGEMLFGYQPLATRDEKVFD-RAGEFVADRFVAGGAAGDRPLLEHVVWSNGPE 441
DA++ ++KGEMLFGYQP ATRD +VF A EFV DRFV G G R LL++V WSNG E
Sbjct: 362 DASFAIKKGEMLFGYQPCATRDPRVFGATAREFVGDRFV--GEEG-RKLLQYVYWSNGRE 418
Query: 442 TRAPSEGNKQCPGKDMVVAVGRLMVAELFRRYDTF 476
T PS NKQCPGK++VV VGRL++ ELF RYDTF
Sbjct: 419 TENPSVDNKQCPGKNLVVLVGRLLLVELFLRYDTF 453
>Os02g0110200 Similar to Hydroperoxide lyase
Length = 487
Score = 306 bits (783), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 202/459 (44%), Positives = 254/459 (55%), Gaps = 17/459 (3%)
Query: 30 REIPGGYGVPFFSPLRDRLDYFYFQGAEEYFRSRVARHGGATVLRVNMPPG-PFISG-NP 87
R IPG YG P PLRDRLDYF+FQG +++FR R A H +TV R N+PP PF G +P
Sbjct: 16 RPIPGSYGPPLLGPLRDRLDYFWFQGPDDFFRRRAADHK-STVFRANIPPTFPFFLGVDP 74
Query: 88 RVVALLDARSFRVLLDDSMVDKADTLDGTYMPSRALFGGHRPLAFLDAADPRHAKIKRVV 147
RVVA++DA +F L D ++VDK D L G Y+PS A G R +LD DP HA+ K
Sbjct: 75 RVVAVVDAAAFTALFDPALVDKRDVLIGPYVPSLAFTRGTRVGVYLDTQDPDHARTKAFS 134
Query: 148 MSLAAARMHHVXXXXXXXXXXXXXXXXXGLGAAVEFNKLNMRYML-------DFTCAALF 200
+ L + L A + + Y++ F C AL
Sbjct: 135 IDLLRRAARNWAAELRAAVDDMLAAVEEDLNRAPDPAAASASYLIPLQKCIFRFLCKALV 194
Query: 201 GGEPPSK-VVGDGAVTKAMAWLAFQLHPIASKVVKPWPLEELLLHTFSLPPFLVRRGXXX 259
G +P + +V V WLA QL P V P PLEELLLH+F LP F+V+ G
Sbjct: 195 GADPAADGLVDRFGVYILDVWLALQLVPTQKVGVIPQPLEELLLHSFPLPSFVVKPGYDL 254
Query: 260 XXXXXXXXXXXXXXXXEKSHTGIPRDELLDNLVFVAIFNAFGGFKIFLPHIVKWLARAGP 319
EK H GI ++E ++N++FV FNAFGGF +FLP +V + + G
Sbjct: 255 LYRFVEKHGAAAVSIAEKEH-GISKEEAINNILFVLGFNAFGGFSVFLPFLVMEVGKPGR 313
Query: 320 ELHAKLATEVRATVPTGEDDGITLAA-VERMPLVKSVVWEALRMNPPVEFQYGHARRDMV 378
+ + E V G D G A V M LV+S V+E LRM PPV Q+G ARRD V
Sbjct: 314 DDLRRRLREEVRRVLGGGDGGEAGFAAVREMALVRSTVYEVLRMQPPVPLQFGRARRDFV 373
Query: 379 VESHD-AAYEVRKGEMLFGYQPLATRDEKVFDRAGEFVADRFVAGGAAGDRPLLEHVVWS 437
+ SH AAYEV KGE+L GYQPLA RD VFDR EFV +RF+ LL++V WS
Sbjct: 374 LRSHGGAAYEVGKGELLCGYQPLAMRDPAVFDRPEEFVPERFLGDDGEA---LLQYVYWS 430
Query: 438 NGPETRAPSEGNKQCPGKDMVVAVGRLMVAELFRRYDTF 476
NGPET PS GNKQC K++VVA ++VAELFRRYD F
Sbjct: 431 NGPETGEPSPGNKQCAAKEVVVATACMLVAELFRRYDDF 469
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.322 0.139 0.423
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 17,509,438
Number of extensions: 749295
Number of successful extensions: 2126
Number of sequences better than 1.0e-10: 5
Number of HSP's gapped: 2123
Number of HSP's successfully gapped: 5
Length of query: 500
Length of database: 17,035,801
Length adjustment: 105
Effective length of query: 395
Effective length of database: 11,553,331
Effective search space: 4563565745
Effective search space used: 4563565745
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 158 (65.5 bits)