BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0967600 Os01g0967600|AK119357
(360 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os01g0967600 Conserved hypothetical protein 750 0.0
Os01g0956600 Protein kinase-like domain containing protein 121 9e-28
Os01g0969700 Protein kinase-like domain containing protein 106 2e-23
Os01g0961300 Hypothetical protein 67 1e-11
>Os01g0967600 Conserved hypothetical protein
Length = 360
Score = 750 bits (1936), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/360 (100%), Positives = 360/360 (100%)
Query: 1 MAPGTSGQPESKGQKKTINIGYELAHQAWDFKIQQGSCRAKIPSNIPRQYDPIQNLDSVL 60
MAPGTSGQPESKGQKKTINIGYELAHQAWDFKIQQGSCRAKIPSNIPRQYDPIQNLDSVL
Sbjct: 1 MAPGTSGQPESKGQKKTINIGYELAHQAWDFKIQQGSCRAKIPSNIPRQYDPIQNLDSVL 60
Query: 61 IFDLMDNSNGLHCLEIMTNCLHKNILHAPIVQKKEDVDCISVWHEPYTGNLLAYLESTLL 120
IFDLMDNSNGLHCLEIMTNCLHKNILHAPIVQKKEDVDCISVWHEPYTGNLLAYLESTLL
Sbjct: 61 IFDLMDNSNGLHCLEIMTNCLHKNILHAPIVQKKEDVDCISVWHEPYTGNLLAYLESTLL 120
Query: 121 GAKHMVGEKVVLPTPVLQNLISQVFDGLKMLRLCGKYHGNFTLEKTYYYKKNGNEIIVKL 180
GAKHMVGEKVVLPTPVLQNLISQVFDGLKMLRLCGKYHGNFTLEKTYYYKKNGNEIIVKL
Sbjct: 121 GAKHMVGEKVVLPTPVLQNLISQVFDGLKMLRLCGKYHGNFTLEKTYYYKKNGNEIIVKL 180
Query: 181 ANFEVKDQVKSTPVLQAKDCQAVGDALRKISKMAKDRKDLDFDCSQIDSLAEELREFSFG 240
ANFEVKDQVKSTPVLQAKDCQAVGDALRKISKMAKDRKDLDFDCSQIDSLAEELREFSFG
Sbjct: 181 ANFEVKDQVKSTPVLQAKDCQAVGDALRKISKMAKDRKDLDFDCSQIDSLAEELREFSFG 240
Query: 241 DLCNIEKKIGGHPFFWVFDDRKFLLTCSIPLAMNKRAFRQKIEGNEDLIALPWDKEDYDG 300
DLCNIEKKIGGHPFFWVFDDRKFLLTCSIPLAMNKRAFRQKIEGNEDLIALPWDKEDYDG
Sbjct: 241 DLCNIEKKIGGHPFFWVFDDRKFLLTCSIPLAMNKRAFRQKIEGNEDLIALPWDKEDYDG 300
Query: 301 LINLMMKYRADHMIKKFDINSRVDYVLCVSGMYAHEKELKTNIQVDRVIMERNPGLCCRL 360
LINLMMKYRADHMIKKFDINSRVDYVLCVSGMYAHEKELKTNIQVDRVIMERNPGLCCRL
Sbjct: 301 LINLMMKYRADHMIKKFDINSRVDYVLCVSGMYAHEKELKTNIQVDRVIMERNPGLCCRL 360
>Os01g0956600 Protein kinase-like domain containing protein
Length = 608
Score = 121 bits (303), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 94/310 (30%), Positives = 150/310 (48%), Gaps = 36/310 (11%)
Query: 65 MDNSNGLHCLEIMTNCLHKNILHAPIVQK----KEDVDCISVWHEPYTGNLLAYLESTLL 120
M +++ +HC+ + N H+NIL + + ++ + EPYTG L S+L
Sbjct: 52 MADNDHVHCIMLTLN--HRNILSMKALSRDKVESNGPSSLAAFVEPYTG-----LLSSLC 104
Query: 121 GAKHMVGEKVV-LPTPVLQNLISQVFDGLKMLRLCGKYHGNFTLEKTYYYKKNGNEIIVK 179
G+++ +P+P+LQ+L+ QV +GL LR YHGN + Y + + VK
Sbjct: 105 FKHDCWGDRINHIPSPLLQSLLRQVIEGLDFLRKNKLYHGNLNWDSILYLQPS----TVK 160
Query: 180 LANFEVKDQVKSTPVLQAKDCQAVGDALRKI--------SKMAK-DRKDLDFDCSQIDSL 230
LANF K + S Q D + L +I SK+A+ DR + C ++SL
Sbjct: 161 LANFR-KQETMSLEEAQWADWLCLIKMLEEILERAAEISSKLAQCDR----YFCGHVESL 215
Query: 231 AEELREFSFGDLCNIEKKIGGHPFFWVFDDRKFLLTCSIPLAMNKRAFRQKIEGNEDLIA 290
L+ L I++ + GHP FW R I L +N F ++ ++ +
Sbjct: 216 TALLKTLDKTALPAIKEIVLGHPLFWDLMTRVNFFAKDISLRLNDDTFMSRVRASK-IRK 274
Query: 291 LPWDK---EDYDGLINLMMKYRADHMIKKFDINSRVDYVLCVSGMYAHEKELKTNIQVDR 347
LPW++ +D+ GL+ M YR D I +D S DYV CV G YAH ++K N VD
Sbjct: 275 LPWNEGTTQDFKGLLFEMETYRKDEGIPAYDFRSLKDYVRCVCGAYAHWNKIKLN--VDD 332
Query: 348 VIMERNPGLC 357
++ + +P +C
Sbjct: 333 IVRQNHPTIC 342
>Os01g0969700 Protein kinase-like domain containing protein
Length = 239
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/183 (37%), Positives = 100/183 (54%), Gaps = 6/183 (3%)
Query: 8 QPESKGQKKTINIGYELAHQAWDFKIQQGSCRAKIPSNIPRQYDPIQNLDSVLIFDLMDN 67
Q E+K + I+I YEL K QQ S R K+PS +P +Y + LI +L
Sbjct: 12 QSEAKDKGNKIDIKYELTSAILSLKHQQASGRLKMPSRLPARYPHNVGHCAELIMNLGIG 71
Query: 68 SNGLHCLEIMTNCLHKNILHAPIVQKK--EDVDCISVWHEPYTGNLLAYLESTLLGAKHM 125
+ +HCL +M +C H+NILH I+++ D W E YT L Y++ L A+
Sbjct: 72 ED-VHCLNVMRSCNHENILHPGIIKEVIIGDSSFNVAWMERYTRVLSEYVQLLLSTARFH 130
Query: 126 --VGEKVVLPTPVLQNLISQVFDGLKMLRLCGKYHGNFTLEKTYYYKKNGNEIIVKLANF 183
VG ++LP+P LQ ++ +FDG++ L L G YHGNF+LE TY + + +VKL NF
Sbjct: 131 APVGATLLLPSPHLQMVLRGIFDGMEQLFLNGYYHGNFSLENTYCFLECSTP-VVKLTNF 189
Query: 184 EVK 186
K
Sbjct: 190 RKK 192
>Os01g0961300 Hypothetical protein
Length = 187
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 85/187 (45%), Gaps = 25/187 (13%)
Query: 191 STPVLQAKDCQAVGDALRKISKMAK-------DRKDLDFDCSQIDSLAEELREF--SFGD 241
S Q +D A+G L+ IS +AK +R L +D LA L EF +
Sbjct: 2 SKEAAQLEDINAIGRMLKSISALAKIGVPHQAERYML------VDHLAMNL-EFLANTQQ 54
Query: 242 LCNIEKKIGGHPFFWVFDDRKFLLTCSIPLAMNKRAFRQKIEGNEDLIALPWDKEDYDGL 301
+ I+ I H FFW + RK IP A+ AF + + + L WDK+ + GL
Sbjct: 55 IGTIKDVILDHVFFWFKERRKRFFIYDIPKALKDAAFCNNVRRGQTCV-LEWDKKPHHGL 113
Query: 302 INLMMKYRADHM-IKKFDINSRVDYVLCVSGMYAHEKELKTNI-------QVDRVIMERN 353
+ M +YR ++ + +D N + V VSG Y HE+E++ ++ VD +
Sbjct: 114 LGSMNRYRKTNLNLPAYDGNDPIQNVKFVSGAYTHEEEVQDDLTFNGMSSTVDEAVQSEQ 173
Query: 354 PGLCCRL 360
P LC L
Sbjct: 174 PMLCLNL 180
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.321 0.139 0.423
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 12,356,563
Number of extensions: 512541
Number of successful extensions: 1144
Number of sequences better than 1.0e-10: 4
Number of HSP's gapped: 1138
Number of HSP's successfully gapped: 4
Length of query: 360
Length of database: 17,035,801
Length adjustment: 102
Effective length of query: 258
Effective length of database: 11,709,973
Effective search space: 3021173034
Effective search space used: 3021173034
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 157 (65.1 bits)