Os01g0969700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein kinase-like domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os01g0969700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Protein kinase-like domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 117.5 | 0.509 | 5.88 | -2.5 | 0.673 | -1.11 | 1.02 | -0.986 | -0.0716 | 22.9 | 1008 | 4298 | -- | -- |
| 120.2 | 0.511 | 5.89 | -2.63 | 0.696 | -1.06 | 1.11 | -- | -0.0595 | 22.7 | 1008 | 4276 | -- | -- |
| 121.83 | 0.514 | 5.88 | -2.55 | 0.667 | -1.12 | -- | -0.94 | -0.0746 | 23 | 1008 | 4317 | -- | -- |
| 124.13 | 0.519 | 5.9 | -2.74 | 0.668 | -1.1 | -- | -- | -0.0915 | 22.8 | 1008 | 4243 | -- | -- |
| 149.47 | 0.569 | 5.86 | -2.57 | -- | -1.15 | -- | -0.913 | -0.0681 | -- | 1008 | 4275 | -- | -- |
| 154.2 | 0.582 | 5.88 | -2.41 | 0.68 | -- | 1.01 | -- | -0.0312 | 23.2 | -- | -- | -- | -- |
| 158.53 | 0.59 | 5.88 | -2.46 | 0.675 | -- | -- | -- | -0.0353 | 23.3 | -- | -- | -- | -- |
| 151.43 | 0.573 | 5.87 | -2.71 | -- | -1.19 | -- | -- | -0.0371 | -- | 1008 | 3675 | -- | -- |
| 301.92 | 0.809 | 5.82 | -- | 0.622 | -0.989 | -- | -- | 0.185 | 23.2 | 1014 | 3695 | -- | -- |
| 187.07 | 0.639 | 5.87 | -2.44 | -- | -- | -- | -- | -0.0288 | -- | -- | -- | -- | -- |
| 317.52 | 0.834 | 5.82 | -- | 0.652 | -- | -- | -- | 0.238 | 23.1 | -- | -- | -- | -- |
| 327.13 | 0.842 | 5.83 | -- | -- | -1.04 | -- | -- | 0.158 | -- | 1014 | 3680 | -- | -- |
| 343.99 | 0.866 | 5.81 | -- | -- | -- | -- | -- | 0.242 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 115.55 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 19 | 12 |
| 2 | 115.61 | wind | 5.0 | 43200 | < th | dose independent | rect. | 6 | 8 |
| 5 | 115.66 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 19 | 2 |
| 15 | 115.76 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 11 | 19 |
| 16 | 115.77 | wind | 5.0 | 43200 | > th | dose independent | rect. | 6 | 8 |
| 18 | 115.80 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 14 | 16 |
| 22 | 115.91 | radiation | 40.0 | 14400 | < th | dose independent | rect. | 16 | 17 |
| 24 | 115.93 | radiation | 40.0 | 14400 | < th | dose independent | rect. | 6 | 3 |
| 26 | 115.96 | radiation | 40.0 | 14400 | < th | dose independent | rect. | 1 | 8 |
| 30 | 115.99 | radiation | 10.0 | 14400 | < th | dose independent | sin | 15 | NA |
| 51 | 116.15 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 8 | 5 |
| 52 | 116.17 | wind | 5.0 | 43200 | > th | dose independent | rect. | 9 | 4 |
| 55 | 116.20 | wind | 5.0 | 43200 | < th | dose independent | rect. | 10 | 2 |
| 58 | 116.20 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 9 | 3 |
| 59 | 116.23 | wind | 5.0 | 43200 | > th | dose independent | rect. | 10 | 2 |
| 66 | 116.27 | wind | 5.0 | 43200 | > th | dose independent | sin | 4 | NA |
| 68 | 116.29 | wind | 5.0 | 43200 | < th | dose independent | sin | 4 | NA |
| 70 | 116.29 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 11 | 8 |
| 102 | 116.41 | wind | 5.0 | 43200 | > th | dose independent | rect. | 20 | 20 |
| 110 | 116.51 | atmosphere | 1010.0 | 4320 | > th | dose independent | rect. | 11 | 1 |
| 111 | 116.51 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 14 | 5 |
| 122 | 116.51 | wind | 5.0 | 43200 | < th | dose independent | rect. | 24 | 15 |
| 127 | 116.53 | wind | 5.0 | 43200 | < th | dose independent | rect. | 20 | 20 |
| 130 | 116.54 | wind | 5.0 | 43200 | > th | dose independent | rect. | 24 | 15 |
| 133 | 116.55 | atmosphere | 1010.0 | 4320 | < th | dose independent | rect. | 11 | 1 |
| 220 | 116.85 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 19 | 19 |
| 234 | 116.93 | radiation | 40.0 | 14400 | > th | dose dependent | rect. | 7 | 2 |
| 254 | 116.98 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 255 | 116.98 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 20 | 1 |
| 257 | 116.99 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 259 | 117.02 | humidity | 50.0 | 4320 | < th | dose independent | rect. | 12 | 5 |
| 267 | 117.11 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 291 | 117.24 | atmosphere | 1010.0 | 4320 | < th | dose independent | rect. | 9 | 3 |
| 294 | 117.25 | atmosphere | 1010.0 | 4320 | > th | dose independent | rect. | 9 | 3 |
| 349 | 117.46 | wind | 5.0 | 43200 | > th | dose dependent | sin | 5 | NA |
| 352 | 117.47 | atmosphere | 1010.0 | 4320 | > th | dose dependent | rect. | 8 | 14 |
| 363 | 117.51 | wind | 9.0 | 43200 | < th | dose independent | rect. | 19 | 6 |
| 374 | 117.54 | humidity | 50.0 | 4320 | > th | dose independent | rect. | 12 | 5 |
| 380 | 117.56 | atmosphere | 1010.0 | 4320 | > th | dose dependent | rect. | 19 | 2 |
| 383 | 117.57 | atmosphere | 1010.0 | 4320 | > th | dose dependent | rect. | 9 | 2 |
| 406 | 117.65 | wind | 9.0 | 43200 | < th | dose independent | rect. | 19 | 10 |
| 419 | 117.69 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 14 | 23 |
| 426 | 117.71 | radiation | 20.0 | 1440 | < th | dose dependent | rect. | 18 | 2 |
| 434 | 117.73 | humidity | 50.0 | 4320 | < th | dose independent | rect. | 9 | 8 |
| 455 | 117.74 | radiation | 30.0 | 14400 | < th | dose independent | sin | 11 | NA |
| 456 | 117.74 | wind | 9.0 | 43200 | > th | dose independent | rect. | 19 | 7 |
| 464 | 117.76 | radiation | 10.0 | 14400 | < th | dose independent | no | NA | NA |
| 466 | 117.76 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 4 | 15 |
| 502 | 117.76 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 4 | 23 |
| 558 | 117.80 | atmosphere | 1010.0 | 4320 | > th | dose dependent | sin | 21 | NA |
| 561 | 117.81 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 16 | 23 |
| 564 | 117.82 | wind | 9.0 | 43200 | > th | dose independent | rect. | 19 | 9 |
| 580 | 117.85 | atmosphere | 1010.0 | 4320 | > th | dose dependent | rect. | 8 | 6 |
| 593 | 117.86 | radiation | 40.0 | 14400 | < th | dose dependent | rect. | 18 | 2 |
| 605 | 117.89 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 14 | 1 |
| 611 | 117.89 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 8 | 4 |
| 651 | 117.95 | atmosphere | 1010.0 | 4320 | > th | dose dependent | rect. | 13 | 9 |
| 659 | 117.96 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 20 | 6 |
| 809 | 118.15 | atmosphere | 1010.0 | 4320 | > th | dose dependent | rect. | 13 | 23 |
| 817 | 118.18 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 19 | 2 |
| 824 | 118.18 | atmosphere | 1010.0 | 4320 | > th | dose dependent | rect. | 18 | 23 |
| 829 | 118.19 | atmosphere | 1010.0 | 4320 | > th | dose dependent | no | NA | NA |
| 838 | 118.19 | atmosphere | 1010.0 | 4320 | > th | dose dependent | rect. | 23 | 23 |
| 854 | 118.22 | humidity | 50.0 | 4320 | < th | dose independent | rect. | 15 | 23 |
| 863 | 118.23 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 5 |
| 965 | 118.34 | radiation | 30.0 | 14400 | < th | dose independent | rect. | 15 | 20 |