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Os01g0967600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.7 (0.0117) R2 : 0.121
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.196 (0.0247) R2dN8 : 0.157 R2N8 : 0.121
σ : 0.221
deviance : 22.37
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
10.67 0.153 10.7 -0.369 0.287 0.295 -0.171 -0.246 -0.189 10.9 24.2 60 -- --
10.75 0.153 10.7 -0.391 0.292 0.324 -0.104 -- -0.197 10.9 24.1 73 -- --
10.78 0.153 10.7 -0.375 0.284 0.295 -- -0.22 -0.188 11 24.17 76 -- --
10.8 0.153 10.7 -0.408 0.291 0.333 -- -- -0.191 11 24.07 67 -- --
14.08 0.175 10.7 -0.342 -- 0.341 -- -0.258 -0.169 -- 30 807 -- --
12.19 0.164 10.7 -0.478 0.25 -- -0.123 -- -0.249 10.5 -- -- -- --
12.25 0.164 10.7 -0.483 0.25 -- -- -- -0.249 10.6 -- -- -- --
14.16 0.175 10.7 -0.382 -- 0.346 -- -- -0.178 -- 30 819 -- --
14.73 0.179 10.7 -- 0.314 0.487 -- -- -0.125 11.3 24.1 80 -- --
16.11 0.188 10.7 -0.487 -- -- -- -- -0.25 -- -- -- -- --
18.39 0.201 10.7 -- 0.254 -- -- -- -0.195 10.7 -- -- -- --
17.71 0.196 10.7 -- -- 0.501 -- -- -0.11 -- 29.7 842 -- --
22.37 0.221 10.7 -- -- -- -- -- -0.196 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 10.00 radiation 1 720 < th dose dependent rect. 7 17
2 10.01 radiation 1 720 < th dose independent rect. 8 16
6 10.08 temperature 10 720 > th dose dependent rect. 16 5
10 10.13 radiation 1 720 > th dose independent rect. 9 10
21 10.16 temperature 15 270 > th dose independent rect. 7 22
28 10.23 radiation 1 720 < th dose independent rect. 15 9
29 10.23 radiation 1 720 < th dose dependent rect. 15 9
42 10.25 radiation 1 720 < th dose dependent rect. 12 12
43 10.26 radiation 1 720 < th dose independent rect. 13 11
56 10.30 temperature 15 720 > th dose independent rect. 9 10
58 10.30 temperature 30 720 < th dose dependent rect. 19 4
61 10.33 temperature 30 720 < th dose dependent rect. 21 1
64 10.34 temperature 30 720 < th dose dependent rect. 13 11
66 10.35 temperature 30 720 < th dose dependent rect. 15 9
71 10.36 temperature 15 90 > th dose independent rect. 9 20
88 10.39 radiation 20 4320 < th dose independent rect. 1 5
102 10.42 temperature 15 720 > th dose independent rect. 7 14
106 10.42 temperature 10 270 > th dose dependent rect. 17 11
107 10.42 temperature 30 270 < th dose dependent rect. 17 14
109 10.43 atmosphere 1015 1440 < th dose independent rect. 1 5
133 10.45 temperature 10 720 > th dose dependent rect. 16 9
147 10.48 temperature 25 720 < th dose independent rect. 12 12
164 10.51 temperature 25 720 > th dose independent rect. 16 5
172 10.52 radiation 20 4320 < th dose independent rect. 21 9
181 10.53 temperature 15 270 > th dose dependent rect. 20 8
189 10.54 temperature 25 90 < th dose dependent rect. 16 19
202 10.56 radiation 20 4320 < th dose independent rect. 19 11
226 10.59 temperature 25 720 > th dose independent rect. 16 3
227 10.59 radiation 1 720 > th dose independent rect. 16 3
245 10.59 temperature 10 90 > th dose dependent rect. 10 19
246 10.59 temperature 25 10 < th dose dependent rect. 17 19
260 10.60 temperature 15 30 > th dose dependent rect. 20 9
288 10.61 humidity 80 90 > th dose dependent rect. 5 19
291 10.61 temperature 25 90 < th dose dependent rect. 11 22
310 10.62 temperature 25 270 < th dose dependent rect. 11 20
340 10.63 temperature 25 10 < th dose dependent rect. 5 21
344 10.64 humidity 90 1440 < th dose independent rect. 11 2
345 10.64 radiation 1 1440 < th dose independent rect. 9 2
352 10.64 radiation 1 1440 < th dose dependent rect. 9 2
360 10.65 radiation 20 4320 < th dose independent rect. 23 7
363 10.65 temperature 15 1440 > th dose independent rect. 6 19
435 10.68 temperature 15 270 > th dose independent rect. 23 13
438 10.68 temperature 30 720 < th dose dependent sin 18 NA
439 10.68 radiation 1 720 < th dose dependent sin 20 NA
465 10.68 temperature 25 90 < th dose dependent rect. 13 22
485 10.69 temperature 25 90 < th dose dependent rect. 19 16
500 10.70 radiation 1 1440 > th dose independent rect. 9 4
502 10.70 radiation 1 1440 > th dose independent rect. 8 6
533 10.71 radiation 1 720 > th dose independent sin 20 NA
534 10.71 radiation 1 720 < th dose independent sin 20 NA
535 10.71 radiation 1 1440 > th dose independent rect. 10 2
536 10.71 radiation 1 1440 < th dose independent rect. 8 6
546 10.71 radiation 1 1440 < th dose dependent rect. 8 6
607 10.73 humidity 80 720 < th dose independent rect. 9 10
608 10.73 temperature 15 1440 > th dose independent rect. 6 17
617 10.73 temperature 30 90 < th dose dependent rect. 21 12
637 10.74 temperature 25 30 < th dose dependent no NA NA
661 10.74 temperature 25 30 < th dose dependent rect. 21 23
669 10.75 temperature 15 720 > th dose independent rect. 9 12
673 10.75 radiation 1 1440 < th dose dependent rect. 8 9
692 10.75 temperature 25 30 < th dose dependent rect. 7 23
693 10.75 temperature 25 30 < th dose dependent rect. 9 23
697 10.75 temperature 25 30 < th dose dependent rect. 19 23
699 10.75 temperature 25 30 < th dose dependent rect. 23 23
705 10.76 temperature 25 270 < th dose dependent sin 13 NA
720 10.76 temperature 10 720 > th dose dependent rect. 9 16
728 10.76 temperature 25 30 < th dose dependent rect. 1 23
743 10.77 radiation 1 1440 < th dose independent rect. 7 10
749 10.77 temperature 10 720 > th dose dependent sin 18 NA
765 10.77 humidity 60 90 > th dose dependent rect. 5 19
787 10.78 atmosphere 1010 30 < th dose independent rect. 11 18
790 10.78 temperature 20 720 > th dose dependent rect. 20 1
792 10.78 humidity 50 720 > th dose dependent rect. 19 5
889 10.80 temperature 15 720 > th dose dependent rect. 9 12
894 10.80 temperature 15 720 > th dose dependent rect. 9 14
896 10.80 humidity 80 720 > th dose dependent rect. 8 16
912 10.81 temperature 25 720 < th dose independent sin 18 NA
974 10.82 humidity 70 1440 > th dose dependent rect. 9 3
981 10.82 temperature 15 720 > th dose dependent rect. 11 10