BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0847800 Os01g0847800|AK100718
(81 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os01g0847800 Similar to Aldose reductase (EC 1.1.1.21) (AR)... 130 3e-31
Os01g0847700 Similar to Aldose reductase 107 2e-24
Os05g0456300 Similar to Aldose reductase 101 1e-22
Os02g0123500 Similar to NADPH-dependent mannose 6-phosphate... 74 2e-14
Os05g0474600 Similar to Aldose reductase-related protein (E... 71 2e-13
>Os01g0847800 Similar to Aldose reductase (EC 1.1.1.21) (AR) (Aldehyde
reductase) (20-alpha- hydroxysteroid dehydrogenase) (EC
1.1.1.149) (20-alpha-HSD)
Length = 81
Score = 130 bits (326), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 64/81 (79%), Positives = 64/81 (79%)
Query: 1 MATHFTLNTGARIPSVGLGTYKXXXXXXXXXXXXXXXXXYRHIDCAPLYKNEQEIGGALK 60
MATHFTLNTGARIPSVGLGTYK YRHIDCAPLYKNEQEIGGALK
Sbjct: 1 MATHFTLNTGARIPSVGLGTYKAGTGVVADVVSAAVKAGYRHIDCAPLYKNEQEIGGALK 60
Query: 61 KLFDDGVVKREDLFITSKIWC 81
KLFDDGVVKREDLFITSKIWC
Sbjct: 61 KLFDDGVVKREDLFITSKIWC 81
>Os01g0847700 Similar to Aldose reductase
Length = 311
Score = 107 bits (267), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 50/81 (61%), Positives = 58/81 (71%)
Query: 1 MATHFTLNTGARIPSVGLGTYKXXXXXXXXXXXXXXXXXYRHIDCAPLYKNEQEIGGALK 60
MA HF LNTGA+IPSVGLGT++ YRHIDCA Y NE+E+G ALK
Sbjct: 1 MAKHFVLNTGAKIPSVGLGTWQSDPGVVGNAVYAAVKAGYRHIDCASAYNNEKEVGLALK 60
Query: 61 KLFDDGVVKREDLFITSKIWC 81
KLF++GVVKREDLFITSK+WC
Sbjct: 61 KLFEEGVVKREDLFITSKLWC 81
>Os05g0456300 Similar to Aldose reductase
Length = 312
Score = 101 bits (251), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 48/81 (59%), Positives = 57/81 (70%)
Query: 1 MATHFTLNTGARIPSVGLGTYKXXXXXXXXXXXXXXXXXYRHIDCAPLYKNEQEIGGALK 60
MA F LNTGA+IPSVGLGT++ YRHIDCA Y NE+EIG ALK
Sbjct: 1 MARCFVLNTGAKIPSVGLGTWQAEPGVVGNAVYAAVKAGYRHIDCAQAYFNEKEIGVALK 60
Query: 61 KLFDDGVVKREDLFITSKIWC 81
K+FD+G+VKRED+FITSK+WC
Sbjct: 61 KVFDEGIVKREDIFITSKLWC 81
>Os02g0123500 Similar to NADPH-dependent mannose 6-phosphate reductase
Length = 375
Score = 74.3 bits (181), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 45/76 (59%)
Query: 5 FTLNTGARIPSVGLGTYKXXXXXXXXXXXXXXXXXYRHIDCAPLYKNEQEIGGALKKLFD 64
L++G +PSVGLG ++ YRH DCA Y+NE E+G AL + F
Sbjct: 69 LALSSGHTMPSVGLGVWRMDSPAIRDLIHSALRIGYRHFDCAADYQNEAEVGDALAEAFQ 128
Query: 65 DGVVKREDLFITSKIW 80
G+VKREDLFIT+K+W
Sbjct: 129 TGLVKREDLFITTKLW 144
>Os05g0474600 Similar to Aldose reductase-related protein (EC 1.1.1.21)
Length = 318
Score = 71.2 bits (173), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 4 HFTLNTGARIPSVGLGTYKXXXXXXXXXXXXXXXXXYRHIDCAPLYKNEQEIGGALKKLF 63
HF L +G IP+VGLGT++ YRH+D A Y EQE+G LK
Sbjct: 13 HFVLKSGHAIPAVGLGTWRAGSDTAHSVQTAITEAGYRHVDTAAQYGIEQEVGKGLKAAM 72
Query: 64 DDGVVKREDLFITSKIWC 81
+ G + R+DLF+TSKIWC
Sbjct: 73 EAG-INRKDLFVTSKIWC 89
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.323 0.141 0.445
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 2,176,358
Number of extensions: 55489
Number of successful extensions: 172
Number of sequences better than 1.0e-10: 5
Number of HSP's gapped: 168
Number of HSP's successfully gapped: 5
Length of query: 81
Length of database: 17,035,801
Length adjustment: 51
Effective length of query: 30
Effective length of database: 14,372,887
Effective search space: 431186610
Effective search space used: 431186610
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 149 (62.0 bits)