Os05g0474600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Aldose reductase-related protein (EC 1.1.1.21).
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Os05g0474600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Aldose reductase-related protein (EC 1.1.1.21).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 30 | 0.257 | 10 | -0.056 | 0.926 | -0.473 | -0.22 | 0.766 | 0.0751 | 22.2 | -11.78 | 49 | -- | -- |
| 30.55 | 0.257 | 10 | -0.0488 | 0.907 | -0.522 | -0.642 | -- | 0.0805 | 22.1 | -18.77 | 60 | -- | -- |
| 30.09 | 0.255 | 10 | -0.0537 | 0.935 | -0.456 | -- | 0.977 | 0.0743 | 22.2 | -10.8 | 49 | -- | -- |
| 32.16 | 0.264 | 10 | -0.0245 | 0.913 | -0.517 | -- | -- | 0.0842 | 22.1 | -6.474 | 66 | -- | -- |
| 60.97 | 0.366 | 10 | -0.0258 | -- | -1.31 | -- | 0.981 | 0.0533 | -- | -4.674e-05 | 58 | -- | -- |
| 33.68 | 0.272 | 10 | -0.0486 | 1.16 | -- | -0.613 | -- | 0.0627 | 22.7 | -- | -- | -- | -- |
| 35.24 | 0.278 | 10 | -0.0241 | 1.16 | -- | -- | -- | 0.0644 | 22.7 | -- | -- | -- | -- |
| 59.14 | 0.358 | 9.99 | -0.029 | -- | -1.37 | -- | -- | 0.0978 | -- | -3.19 | 47 | -- | -- |
| 32.18 | 0.264 | 10 | -- | 0.914 | -0.516 | -- | -- | 0.0862 | 22.1 | -7.232 | 66 | -- | -- |
| 118.3 | 0.508 | 9.99 | -0.00176 | -- | -- | -- | -- | 0.0705 | -- | -- | -- | -- | -- |
| 35.25 | 0.278 | 10 | -- | 1.16 | -- | -- | -- | 0.067 | 22.7 | -- | -- | -- | -- |
| 59.16 | 0.358 | 9.99 | -- | -- | -1.37 | -- | -- | 0.101 | -- | -4.311 | 47 | -- | -- |
| 118.3 | 0.508 | 9.99 | -- | -- | -- | -- | -- | 0.0707 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 27.64 | temperature | 20 | 30 | > th | dose independent | rect. | 20 | 20 |
| 3 | 28.04 | temperature | 20 | 10 | > th | dose independent | rect. | 20 | 8 |
| 24 | 28.64 | temperature | 20 | 10 | > th | dose independent | rect. | 11 | 16 |
| 27 | 28.76 | temperature | 15 | 90 | > th | dose dependent | rect. | 20 | 7 |
| 28 | 28.77 | temperature | 15 | 10 | > th | dose dependent | rect. | 20 | 8 |
| 65 | 29.18 | temperature | 20 | 270 | > th | dose independent | rect. | 9 | 16 |
| 75 | 29.23 | temperature | 20 | 90 | > th | dose independent | rect. | 9 | 18 |
| 80 | 29.28 | temperature | 20 | 10 | > th | dose independent | rect. | 20 | 11 |
| 109 | 29.41 | temperature | 20 | 10 | > th | dose independent | rect. | 9 | 19 |
| 113 | 29.43 | humidity | 60 | 30 | > th | dose independent | rect. | 4 | 16 |
| 121 | 29.46 | radiation | 30 | 30 | < th | dose dependent | rect. | 7 | 13 |
| 132 | 29.52 | humidity | 50 | 10 | > th | dose dependent | rect. | 4 | 16 |
| 157 | 29.61 | radiation | 40 | 10 | < th | dose dependent | rect. | 4 | 16 |
| 159 | 29.64 | radiation | 40 | 10 | < th | dose independent | rect. | 4 | 16 |
| 160 | 29.64 | radiation | 30 | 90 | < th | dose independent | rect. | 3 | 17 |
| 183 | 29.72 | radiation | 10 | 10 | < th | dose dependent | sin | 22 | NA |
| 224 | 29.84 | radiation | 30 | 90 | < th | dose dependent | sin | 23 | NA |
| 243 | 29.88 | radiation | 1 | 10 | > th | dose dependent | rect. | 11 | 23 |
| 270 | 29.94 | radiation | 30 | 30 | < th | dose dependent | rect. | 10 | 10 |
| 346 | 30.07 | radiation | 10 | 10 | < th | dose dependent | rect. | 13 | 7 |
| 362 | 30.09 | temperature | 20 | 10 | > th | dose independent | rect. | 9 | 22 |
| 369 | 30.10 | temperature | 20 | 30 | > th | dose independent | rect. | 11 | 23 |
| 408 | 30.14 | temperature | 15 | 30 | > th | dose dependent | rect. | 20 | 11 |
| 410 | 30.14 | radiation | 1 | 10 | > th | dose dependent | rect. | 13 | 23 |
| 414 | 30.16 | temperature | 25 | 270 | < th | dose independent | rect. | 7 | 4 |
| 424 | 30.17 | radiation | 30 | 30 | < th | dose dependent | rect. | 1 | 23 |
| 429 | 30.18 | wind | 9 | 14400 | < th | dose dependent | rect. | 24 | 1 |
| 430 | 30.18 | humidity | 90 | 30 | < th | dose dependent | rect. | 11 | 5 |
| 433 | 30.18 | humidity | 50 | 10 | > th | dose dependent | rect. | 7 | 13 |
| 435 | 30.18 | radiation | 30 | 90 | < th | dose dependent | rect. | 21 | 23 |
| 442 | 30.19 | radiation | 40 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 449 | 30.21 | temperature | 20 | 30 | > th | dose independent | rect. | 6 | 22 |
| 479 | 30.24 | radiation | 30 | 90 | < th | dose dependent | rect. | 15 | 23 |
| 485 | 30.25 | wind | 1 | 14400 | > th | dose dependent | rect. | 24 | 1 |
| 487 | 30.25 | wind | 1 | 14400 | > th | dose dependent | rect. | 20 | 9 |
| 493 | 30.26 | temperature | 20 | 10 | > th | dose independent | rect. | 11 | 20 |
| 512 | 30.27 | wind | 3 | 14400 | > th | dose dependent | rect. | 19 | 13 |
| 514 | 30.27 | radiation | 1 | 10 | > th | dose dependent | rect. | 9 | 22 |
| 516 | 30.27 | radiation | 30 | 30 | < th | dose dependent | rect. | 23 | 23 |
| 517 | 30.28 | radiation | 20 | 30 | < th | dose independent | rect. | 7 | 13 |
| 521 | 30.28 | wind | 3 | 14400 | > th | dose dependent | sin | 9 | NA |
| 550 | 30.30 | radiation | 1 | 10 | > th | dose dependent | rect. | 6 | 12 |
| 566 | 30.30 | radiation | 1 | 90 | > th | dose dependent | rect. | 8 | 23 |
| 577 | 30.31 | wind | 9 | 14400 | < th | dose dependent | rect. | 24 | 3 |
| 581 | 30.31 | wind | 9 | 14400 | < th | dose dependent | rect. | 20 | 9 |
| 598 | 30.32 | humidity | 90 | 30 | < th | dose dependent | rect. | 6 | 10 |
| 602 | 30.33 | radiation | 10 | 90 | > th | dose independent | rect. | 9 | 7 |
| 610 | 30.33 | radiation | 1 | 90 | > th | dose dependent | rect. | 6 | 10 |
| 622 | 30.33 | radiation | 1 | 10 | > th | dose dependent | rect. | 15 | 23 |
| 623 | 30.33 | radiation | 1 | 90 | > th | dose dependent | rect. | 17 | 23 |
| 630 | 30.34 | radiation | 1 | 90 | > th | dose dependent | sin | 23 | NA |
| 631 | 30.34 | radiation | 1 | 10 | > th | dose dependent | no | NA | NA |
| 706 | 30.35 | radiation | 10 | 10 | > th | dose independent | sin | 19 | NA |
| 710 | 30.35 | humidity | 50 | 30 | > th | dose dependent | sin | 0 | NA |
| 717 | 30.35 | humidity | 90 | 30 | < th | dose dependent | rect. | 24 | 16 |
| 721 | 30.36 | humidity | 80 | 30 | < th | dose independent | rect. | 11 | 5 |
| 722 | 30.36 | humidity | 70 | 1440 | > th | dose independent | rect. | 6 | 6 |
| 729 | 30.36 | humidity | 70 | 1440 | > th | dose independent | rect. | 19 | 17 |
| 732 | 30.36 | wind | 1 | 14400 | > th | dose dependent | rect. | 24 | 4 |
| 799 | 30.38 | radiation | 1 | 90 | > th | dose dependent | no | NA | NA |
| 805 | 30.38 | radiation | 1 | 10 | > th | dose dependent | rect. | 9 | 9 |
| 864 | 30.38 | humidity | 70 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 882 | 30.39 | radiation | 40 | 10 | < th | dose independent | rect. | 7 | 13 |
| 887 | 30.39 | humidity | 80 | 10 | < th | dose dependent | rect. | 11 | 7 |
| 896 | 30.39 | radiation | 1 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 900 | 30.40 | radiation | 30 | 90 | < th | dose dependent | no | NA | NA |
| 901 | 30.40 | humidity | 80 | 270 | < th | dose dependent | rect. | 11 | 1 |
| 930 | 30.41 | radiation | 1 | 10 | > th | dose dependent | sin | 22 | NA |
| 955 | 30.42 | humidity | 80 | 1440 | < th | dose dependent | rect. | 6 | 6 |
| 958 | 30.42 | radiation | 1 | 90 | > th | dose dependent | rect. | 8 | 8 |
| 959 | 30.42 | wind | 3 | 14400 | > th | dose dependent | rect. | 24 | 10 |
| 961 | 30.42 | wind | 3 | 14400 | > th | dose dependent | rect. | 23 | 12 |
| 974 | 30.42 | radiation | 40 | 10 | < th | dose dependent | rect. | 16 | 23 |
| 975 | 30.43 | humidity | 70 | 1440 | < th | dose independent | rect. | 6 | 6 |
| 990 | 30.43 | humidity | 90 | 30 | < th | dose dependent | rect. | 9 | 7 |