Os01g0847700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Aldose reductase.
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Os01g0847700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Aldose reductase.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 146.64 | 0.569 | 13 | 0.853 | 1.26 | -1.39 | 1.63 | 0.0788 | -0.102 | 6.99 | 5.391 | 63 | -- | -- |
| 146.66 | 0.564 | 13 | 0.853 | 1.26 | -1.4 | 1.6 | -- | -0.103 | 6.92 | 5.275 | 63 | -- | -- |
| 152.74 | 0.576 | 13 | 0.887 | 1.29 | -1.32 | -- | -0.284 | -0.0996 | 7.18 | 5.334 | 63 | -- | -- |
| 153.21 | 0.577 | 13 | 0.884 | 1.28 | -1.32 | -- | -- | -0.101 | 7.18 | 5.37 | 63 | -- | -- |
| 205.47 | 0.671 | 13.1 | 0.887 | -- | -1.62 | -- | -0.23 | -0.063 | -- | 5.334 | 63 | -- | -- |
| 179.32 | 0.628 | 13 | 0.865 | 2.22 | -- | 0.749 | -- | -0.00278 | 9.97 | -- | -- | -- | -- |
| 181.5 | 0.631 | 13 | 0.894 | 2.21 | -- | -- | -- | -0.000854 | 9.99 | -- | -- | -- | -- |
| 205.73 | 0.671 | 13.1 | 0.888 | -- | -1.62 | -- | -- | -0.0626 | -- | 5.37 | 63 | -- | -- |
| 173.32 | 0.613 | 13.1 | -- | 1.27 | -1.33 | -- | -- | -0.191 | 7.09 | 3.977 | 60 | -- | -- |
| 476.4 | 1.02 | 13.1 | 0.868 | -- | -- | -- | -- | -0.00215 | -- | -- | -- | -- | -- |
| 202.59 | 0.666 | 13 | -- | 2.21 | -- | -- | -- | -0.1 | 9.96 | -- | -- | -- | -- |
| 225.59 | 0.7 | 13.1 | -- | -- | -1.63 | -- | -- | -0.16 | -- | 5.794 | 2 | -- | -- |
| 496.25 | 1.04 | 13.1 | -- | -- | -- | -- | -- | -0.0984 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 146.29 | radiation | 10 | 720 | < th | dose dependent | rect. | 15 | 4 |
| 4 | 149.05 | radiation | 10 | 90 | < th | dose dependent | rect. | 6 | 23 |
| 7 | 150.25 | humidity | 90 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 9 | 150.55 | humidity | 50 | 1440 | > th | dose dependent | rect. | 11 | 1 |
| 10 | 150.61 | radiation | 10 | 720 | < th | dose dependent | rect. | 15 | 12 |
| 11 | 150.80 | radiation | 1 | 720 | < th | dose independent | rect. | 17 | 2 |
| 13 | 151.14 | radiation | 10 | 720 | < th | dose dependent | rect. | 11 | 8 |
| 14 | 151.16 | radiation | 10 | 90 | < th | dose dependent | rect. | 17 | 23 |
| 23 | 151.83 | humidity | 80 | 720 | < th | dose independent | rect. | 11 | 5 |
| 28 | 152.17 | radiation | 10 | 90 | < th | dose dependent | no | NA | NA |
| 30 | 152.28 | radiation | 10 | 90 | < th | dose dependent | rect. | 15 | 23 |
| 31 | 152.34 | radiation | 10 | 90 | < th | dose dependent | rect. | 9 | 23 |
| 34 | 152.40 | radiation | 10 | 10 | < th | dose dependent | rect. | 18 | 23 |
| 40 | 152.67 | radiation | 10 | 90 | < th | dose dependent | rect. | 12 | 23 |
| 41 | 152.68 | humidity | 80 | 1440 | > th | dose dependent | rect. | 10 | 4 |
| 42 | 152.70 | radiation | 1 | 720 | > th | dose independent | rect. | 11 | 20 |
| 61 | 153.24 | radiation | 1 | 90 | > th | dose independent | rect. | 4 | 14 |
| 75 | 153.43 | humidity | 90 | 1440 | < th | dose dependent | rect. | 9 | 4 |
| 76 | 153.48 | radiation | 1 | 90 | < th | dose independent | rect. | 17 | 23 |
| 82 | 153.58 | humidity | 80 | 1440 | < th | dose independent | rect. | 7 | 7 |
| 90 | 153.71 | radiation | 1 | 90 | > th | dose independent | no | NA | NA |
| 136 | 153.72 | radiation | 1 | 90 | < th | dose independent | no | NA | NA |
| 137 | 153.73 | radiation | 1 | 90 | < th | dose independent | rect. | 9 | 23 |
| 138 | 153.74 | radiation | 1 | 90 | < th | dose independent | rect. | 12 | 23 |
| 140 | 153.74 | humidity | 50 | 1440 | > th | dose dependent | rect. | 9 | 4 |
| 147 | 153.83 | humidity | 80 | 720 | > th | dose independent | rect. | 10 | 9 |
| 162 | 153.88 | humidity | 80 | 1440 | < th | dose dependent | rect. | 6 | 6 |
| 164 | 153.90 | humidity | 90 | 1440 | < th | dose dependent | rect. | 8 | 6 |
| 181 | 154.03 | radiation | 1 | 90 | < th | dose independent | rect. | 15 | 23 |
| 203 | 154.20 | humidity | 80 | 1440 | > th | dose independent | rect. | 6 | 9 |
| 209 | 154.22 | radiation | 1 | 720 | < th | dose independent | rect. | 9 | 10 |
| 212 | 154.24 | humidity | 80 | 1440 | > th | dose independent | rect. | 10 | 4 |
| 214 | 154.24 | radiation | 1 | 30 | < th | dose independent | rect. | 7 | 23 |
| 216 | 154.26 | humidity | 70 | 720 | > th | dose dependent | rect. | 10 | 9 |
| 220 | 154.28 | radiation | 1 | 720 | < th | dose independent | rect. | 8 | 20 |
| 315 | 154.41 | humidity | 80 | 720 | > th | dose independent | rect. | 7 | 12 |
| 330 | 154.57 | humidity | 50 | 720 | > th | dose dependent | rect. | 17 | 2 |
| 386 | 154.93 | radiation | 1 | 720 | < th | dose independent | rect. | 13 | 15 |
| 395 | 154.99 | radiation | 10 | 90 | < th | dose dependent | rect. | 9 | 20 |
| 429 | 155.23 | radiation | 1 | 720 | < th | dose independent | rect. | 23 | 20 |
| 433 | 155.27 | radiation | 1 | 30 | < th | dose independent | rect. | 23 | 23 |
| 489 | 155.55 | radiation | 10 | 720 | < th | dose dependent | sin | 15 | NA |
| 539 | 155.81 | humidity | 70 | 10 | > th | dose dependent | rect. | 10 | 10 |
| 544 | 155.83 | humidity | 50 | 720 | > th | dose dependent | rect. | 8 | 20 |
| 552 | 155.88 | humidity | 80 | 1440 | < th | dose dependent | sin | 6 | NA |
| 576 | 155.94 | radiation | 1 | 30 | < th | dose independent | rect. | 21 | 23 |
| 591 | 156.01 | radiation | 1 | 30 | > th | dose independent | rect. | 17 | 23 |
| 646 | 156.26 | humidity | 50 | 10 | > th | dose dependent | rect. | 10 | 10 |
| 732 | 156.62 | radiation | 1 | 30 | < th | dose dependent | rect. | 23 | 23 |
| 741 | 156.64 | humidity | 80 | 30 | > th | dose dependent | rect. | 7 | 13 |
| 764 | 156.74 | radiation | 10 | 90 | < th | dose dependent | rect. | 21 | 23 |
| 787 | 156.85 | humidity | 80 | 1440 | < th | dose independent | sin | 3 | NA |
| 788 | 156.85 | humidity | 80 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 792 | 156.88 | humidity | 50 | 10 | > th | dose dependent | rect. | 10 | 12 |
| 862 | 157.10 | radiation | 1 | 720 | > th | dose independent | rect. | 11 | 8 |
| 873 | 157.10 | radiation | 1 | 30 | < th | dose dependent | rect. | 15 | 17 |
| 919 | 157.22 | humidity | 80 | 1440 | > th | dose independent | sin | 2 | NA |