BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0837800 Os01g0837800|AK064840
(415 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os01g0837800 Similar to Cation diffusion facilitator 8 701 0.0
Os05g0461900 Cation efflux protein family protein 514 e-146
Os01g0130000 Cation efflux protein family protein 412 e-115
Os03g0226400 Similar to Cation diffusion facilitator 8 350 8e-97
Os02g0775100 Similar to Cation diffusion facilitator 8 220 2e-57
AK108242 165 5e-41
AK107653 126 3e-29
>Os01g0837800 Similar to Cation diffusion facilitator 8
Length = 415
Score = 701 bits (1809), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/376 (90%), Positives = 342/376 (90%)
Query: 40 EKSWRLNFDGFXXXXXXXXXXXXXGLHHHCLGVLSQGPEDVVAEYYQQQVEMLEGFNEMD 99
EKSWRLNFDGF GLHHHCLGVLSQGPEDVVAEYYQQQVEMLEGFNEMD
Sbjct: 40 EKSWRLNFDGFRPPEVQQERRPPRGLHHHCLGVLSQGPEDVVAEYYQQQVEMLEGFNEMD 99
Query: 100 TLTDRGFLPGMSKEEREKVARSETLAIRLSNIANMVLFAAKVYASVRSGSLAIIASTXXX 159
TLTDRGFLPGMSKEEREKVARSETLAIRLSNIANMVLFAAKVYASVRSGSLAIIAST
Sbjct: 100 TLTDRGFLPGMSKEEREKVARSETLAIRLSNIANMVLFAAKVYASVRSGSLAIIASTLDS 159
Query: 160 XXXXXXGFILWFTAFSMQTPNPYRYPIGKKRMQPLGILVFASVMATLGLQIILESVRSLL 219
GFILWFTAFSMQTPNPYRYPIGKKRMQPLGILVFASVMATLGLQIILESVRSLL
Sbjct: 160 LLDLLSGFILWFTAFSMQTPNPYRYPIGKKRMQPLGILVFASVMATLGLQIILESVRSLL 219
Query: 220 SDGDEFSLTKEQEKWVVDIMXXXXXXXXXXXXYCRTFTNEIVKAYAQDHFFDVITNMIGL 279
SDGDEFSLTKEQEKWVVDIM YCRTFTNEIVKAYAQDHFFDVITNMIGL
Sbjct: 220 SDGDEFSLTKEQEKWVVDIMLAVTLVKLALVLYCRTFTNEIVKAYAQDHFFDVITNMIGL 279
Query: 280 VAALLATYIEGWIDPVGAIILAIYTIRTWSMTVLENVHSLVGQSASPEYLQKLTYLCWNH 339
VAALLATYIEGWIDPVGAIILAIYTIRTWSMTVLENVHSLVGQSASPEYLQKLTYLCWNH
Sbjct: 280 VAALLATYIEGWIDPVGAIILAIYTIRTWSMTVLENVHSLVGQSASPEYLQKLTYLCWNH 339
Query: 340 HKAVRHIDTVRAYTFGSHYFVEVDIVLPSSMPLQEAHDIGEALQEKLERLPEIERAFVHL 399
HKAVRHIDTVRAYTFGSHYFVEVDIVLPSSMPLQEAHDIGEALQEKLERLPEIERAFVHL
Sbjct: 340 HKAVRHIDTVRAYTFGSHYFVEVDIVLPSSMPLQEAHDIGEALQEKLERLPEIERAFVHL 399
Query: 400 DYEFTHRPEHALSHEK 415
DYEFTHRPEHALSHEK
Sbjct: 400 DYEFTHRPEHALSHEK 415
>Os05g0461900 Cation efflux protein family protein
Length = 376
Score = 514 bits (1325), Expect = e-146, Method: Compositional matrix adjust.
Identities = 266/374 (71%), Positives = 274/374 (73%), Gaps = 41/374 (10%)
Query: 41 KSWRLNFDGFXXXXXXXXXXXXXGLHHHCLGVLSQGPEDVVAEYYQQQVEMLEGFNEMDT 100
+ WRLNFDG H LG L Q P D VAEYYQQQ E+LEGFNEMDT
Sbjct: 42 RPWRLNFDGLRRPEAHQEKPPRR--FHDRLGGLVQSPGDDVAEYYQQQSELLEGFNEMDT 99
Query: 101 LTDRGFLPGMSKEEREKVARSETLAIRLSNIANMVLFAAKVYASVRSGSLAIIASTXXXX 160
LTDRGFLPGMSKEE EKVARSE LAIRLSNIANMVLFAAKVYAS+RSGSLAIIAST
Sbjct: 100 LTDRGFLPGMSKEECEKVARSEALAIRLSNIANMVLFAAKVYASIRSGSLAIIASTLDSL 159
Query: 161 XXXXXGFILWFTAFSMQTPNPYRYPIGKKRMQPLGILVFASVMATLGLQIILESVRSLLS 220
GFILWFTAFS +T NPYRYPIGK+RMQPLGILVFASVMATLGLQIILES RSL
Sbjct: 160 LDLLSGFILWFTAFSKKTSNPYRYPIGKRRMQPLGILVFASVMATLGLQIILESTRSLFY 219
Query: 221 DGDEFSLTKEQEKWVVDIMXXXXXXXXXXXXYCRTFTNEIVKAYAQDHFFDVITNMIGLV 280
DGD F LTKEQEKWVVDIM YCR+FTNE
Sbjct: 220 DGDTFRLTKEQEKWVVDIMLSVTSVKLLLVVYCRSFTNE--------------------- 258
Query: 281 AALLATYIEGWIDPVGAIILAIYTIRTWSMTVLENVHSLVGQSASPEYLQKLTYLCWNHH 340
ILAIYTIRTWSMTVLENVHSLVGQSASPEYLQKLTYLCWNHH
Sbjct: 259 ------------------ILAIYTIRTWSMTVLENVHSLVGQSASPEYLQKLTYLCWNHH 300
Query: 341 KAVRHIDTVRAYTFGSHYFVEVDIVLPSSMPLQEAHDIGEALQEKLERLPEIERAFVHLD 400
KAVRHIDTVRAYTFGSHYFVEVDIVLP MPLQEAHDIGEA QEKLE LPEIERAFVHLD
Sbjct: 301 KAVRHIDTVRAYTFGSHYFVEVDIVLPCDMPLQEAHDIGEAPQEKLESLPEIERAFVHLD 360
Query: 401 YEFTHRPEHALSHE 414
YEFTH+PEHA SH+
Sbjct: 361 YEFTHQPEHARSHD 374
>Os01g0130000 Cation efflux protein family protein
Length = 391
Score = 412 bits (1058), Expect = e-115, Method: Compositional matrix adjust.
Identities = 197/338 (58%), Positives = 253/338 (74%), Gaps = 3/338 (0%)
Query: 74 SQGPEDVVAEYYQQQVEMLEGFNEMDTLTDRGFLP--GMSKEEREKVARSETLAIRLSNI 131
S G +A+YY++Q +L+ F+EM+T+ + G L ++EE ++A+ E LAI LSNI
Sbjct: 51 SHGKHRKIAKYYKKQENLLKDFSEMETMNEIGSLDQNAPTEEELRQMAKGERLAINLSNI 110
Query: 132 ANMVLFAAKVYASVRSGSLAIIASTXXXXXXXXXGFILWFTAFSMQTPNPYRYPIGKKRM 191
N++LF KV ASV S S+A+IAST GFILWFTA +M+ PN Y YPIGK+RM
Sbjct: 111 INLILFIGKVLASVESLSMAVIASTLDSLLDLLSGFILWFTAHAMKKPNKYSYPIGKRRM 170
Query: 192 QPLGILVFASVMATLGLQIILESVRSLLSDGDEFSLTKEQEKWVVDIMXXXXXXXXXXXX 251
QP+GI+VFASVM TLG Q+++ES R L+++ + +E W++ M
Sbjct: 171 QPVGIIVFASVMGTLGFQVLIESGRQLITNEHQV-FDHRKELWMIGSMSSVAVVKFFLML 229
Query: 252 YCRTFTNEIVKAYAQDHFFDVITNMIGLVAALLATYIEGWIDPVGAIILAIYTIRTWSMT 311
YCR+F NEIV+AYAQDHFFDVITN +GLV+ALLA + W+DPVGAI++A+YTI TW+ T
Sbjct: 230 YCRSFKNEIVRAYAQDHFFDVITNSVGLVSALLAVRYKWWMDPVGAILIAVYTITTWART 289
Query: 312 VLENVHSLVGQSASPEYLQKLTYLCWNHHKAVRHIDTVRAYTFGSHYFVEVDIVLPSSMP 371
V+ENV +L+G+SA EYL KLTYL WNHH+ +RHIDTVRAYTFG+HYFVEVDIVLP MP
Sbjct: 290 VVENVGTLIGRSAPAEYLTKLTYLIWNHHEEIRHIDTVRAYTFGTHYFVEVDIVLPGDMP 349
Query: 372 LQEAHDIGEALQEKLERLPEIERAFVHLDYEFTHRPEH 409
L AHDIGE+LQEKLE+LPE+ERAFVH+D+EFTHRPEH
Sbjct: 350 LSHAHDIGESLQEKLEQLPEVERAFVHVDFEFTHRPEH 387
>Os03g0226400 Similar to Cation diffusion facilitator 8
Length = 441
Score = 350 bits (899), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 173/338 (51%), Positives = 229/338 (67%), Gaps = 3/338 (0%)
Query: 74 SQGPEDVVAEYYQQQVEMLEGFNEMDTLTDRGFLPGMSKEEREKVARSETLAIRLSNIAN 133
S+G + EYY++Q L F E+D++ + MS+E+ + A+++SN AN
Sbjct: 98 SKGLREGEKEYYEKQFATLRSFEEVDSIEESNV---MSEEDDIAEQKQSEFAMKISNYAN 154
Query: 134 MVLFAAKVYASVRSGSLAIIASTXXXXXXXXXGFILWFTAFSMQTPNPYRYPIGKKRMQP 193
M+L A K+YA+++SGS+AI AST G ILWFT SM++ N Y+YPIGK R+QP
Sbjct: 155 MILLALKIYATIKSGSIAIAASTLDSLLDLMAGGILWFTHLSMKSINVYKYPIGKLRVQP 214
Query: 194 LGILVFASVMATLGLQIILESVRSLLSDGDEFSLTKEQEKWVVDIMXXXXXXXXXXXXYC 253
+GI++FA+VMATLG Q+ +++V L+ + LT Q W+ IM YC
Sbjct: 215 VGIIIFAAVMATLGFQVFVQAVEKLIVNETPDKLTPVQLTWLYSIMIFATVVKLALWLYC 274
Query: 254 RTFTNEIVKAYAQDHFFDVITNMIGLVAALLATYIEGWIDPVGAIILAIYTIRTWSMTVL 313
RT N+IV+AYA+DH+FDV+TN++GL AA+L WIDPVGAI LA+YTI WS TV
Sbjct: 275 RTSGNKIVRAYAKDHYFDVVTNVVGLAAAVLGDMFYWWIDPVGAIALAVYTITNWSGTVW 334
Query: 314 ENVHSLVGQSASPEYLQKLTYLCWNHHKAVRHIDTVRAYTFGSHYFVEVDIVLPSSMPLQ 373
EN SLVG+SA PE LQKLTYL HH ++ +DTVRAYTFG YFVEVDI LP +PL+
Sbjct: 335 ENAVSLVGESAPPEMLQKLTYLAIRHHPQIKRVDTVRAYTFGVLYFVEVDIELPEELPLK 394
Query: 374 EAHDIGEALQEKLERLPEIERAFVHLDYEFTHRPEHAL 411
EAH IGE+LQ K+E LPE+ERAFVHLD+E H+PEH +
Sbjct: 395 EAHAIGESLQIKIEELPEVERAFVHLDFECDHKPEHNI 432
>Os02g0775100 Similar to Cation diffusion facilitator 8
Length = 204
Score = 220 bits (560), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 105/183 (57%), Positives = 131/183 (71%)
Query: 227 LTKEQEKWVVDIMXXXXXXXXXXXXYCRTFTNEIVKAYAQDHFFDVITNMIGLVAALLAT 286
+T EQ W+ IM YCR+ N IV+AYA+DH+FDV+TN++GLVAA+L
Sbjct: 11 MTPEQLIWLYSIMLSATVVKLALYIYCRSSGNSIVQAYAKDHYFDVVTNVVGLVAAVLGD 70
Query: 287 YIEGWIDPVGAIILAIYTIRTWSMTVLENVHSLVGQSASPEYLQKLTYLCWNHHKAVRHI 346
WIDPVGA++LA+YTI WS TV EN +LVGQ A + LQKLTYL H VR +
Sbjct: 71 KFFWWIDPVGAVLLAVYTIVNWSGTVYENAVTLVGQCAPSDMLQKLTYLAMKHDPRVRRV 130
Query: 347 DTVRAYTFGSHYFVEVDIVLPSSMPLQEAHDIGEALQEKLERLPEIERAFVHLDYEFTHR 406
DTVRAY+FG+ YFVEVDI L M L EAH IGE+LQ+K+E+LPE+ERAFVH+D+E TH+
Sbjct: 131 DTVRAYSFGALYFVEVDIELSEDMRLGEAHSIGESLQDKIEKLPEVERAFVHVDFESTHK 190
Query: 407 PEH 409
PEH
Sbjct: 191 PEH 193
>AK108242
Length = 537
Score = 165 bits (418), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 106/347 (30%), Positives = 180/347 (51%), Gaps = 29/347 (8%)
Query: 78 EDVVAEYYQQQVEMLEGF-NEMDTLTDRGFLPGMSKEEREKVARSETLAIRLSNIANMVL 136
E + ++Y+ Q E +E + D G K++RE A +A+ S AN VL
Sbjct: 209 ERQIRDFYEAQNEHIERLLKPISKHADEG------KQDRESSALKVKIAVYASIGANFVL 262
Query: 137 FAAKVYASVRSGSLAIIASTXXXXXXXXXGFILWFTAFSMQTPNPYRYPIGKKRMQPLGI 196
++YA+V S SL++ A+ +L + + + ++PIG R +P+G
Sbjct: 263 AILQLYAAVSSLSLSLFATAADSVFDPFANLVLNWLHRKSENVDERKWPIGGSRFEPIGN 322
Query: 197 LVFASVMATLGLQIILESVRSLLS-DGDEF----SLTKEQEKWVVDIMXXXXXXXXXXXX 251
+ +A++M + +++ES++ L + DGD+ SL +V +
Sbjct: 323 ITYAALMGMVSAILVVESIQELATGDGDKKLFIPSLIAVGVAFVTKAILAI--------- 373
Query: 252 YC---RTFTNEIVKAYAQDHFFDVITNMIGLVAALLATYIEGWIDPVGAIILAIYTIRTW 308
YC R +++++ Y QDH D+ N G+ + I GWIDP GA+I+++ I +W
Sbjct: 374 YCYGLRKYSSQVEVLY-QDHRNDLFINGFGIFTSAAGATIAGWIDPAGALIISVAIIVSW 432
Query: 309 SMTVLENVHSLVGQSASPEYLQKLTYLCWNHHKAVRHIDTVRAYTFGSHYFVEVDIVLPS 368
+ T +L G +A ++LQ +TY ++ I++VRAY+ G Y VE+DIV+
Sbjct: 433 TRTAFGEFKTLAGAAAPTDFLQLVTYNAALFSDEIQAIESVRAYSSGPRYIVEIDIVMHP 492
Query: 369 SMPLQEAHDIGEALQEKLERLPEIERAFVHLDYEFTHRPEHALSHEK 415
PL ++HD+ +ALQ++LE LP +ERAF+H+D+E EHA H K
Sbjct: 493 ETPLWKSHDLSQALQDQLESLPMVERAFIHVDHEV----EHAFEHRK 535
>AK107653
Length = 785
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 95/304 (31%), Positives = 159/304 (52%), Gaps = 13/304 (4%)
Query: 107 LPGMSKEEREKVARSETLAIRLSNIANMVLFAAKVYASVRSGSLAIIASTXXXXXXXXXG 166
+P +KEE + +RS AI ++ + N++L A K A + S S+++IAS
Sbjct: 473 VPSRAKEE--ETSRSVQFAININLLINILLLAGKGVAVLSSNSVSLIASFVDSALDLLST 530
Query: 167 FILWFTAFSMQT---PNPYRYPIGKKRMQPLGILVFASVMATLGLQIILESV---RSLLS 220
I++ T+ ++ Y YP+GK+R++PLG+++F+ +M +Q+ +ESV R +L+
Sbjct: 531 IIIFATSKAIAYCSWKTIYEYPVGKQRLEPLGVVIFSVLMIASFVQVFIESVGRLREVLA 590
Query: 221 DGDEFSLTKEQEKWV-VDIMXXXXXXXXXXXXYCRTFTNEIVKAYAQDHFFDVITNMIGL 279
G E S + + V M R+ + V+A +QD DV+ N+ L
Sbjct: 591 TGSEDSESAASLPLIGVAFMLATIGIKTVMWLLYRSSKSSGVRAVSQDAENDVVFNIASL 650
Query: 280 VAALLATYIEGW--IDPVGAIILAIYTIRTWSMTVLENVHSLVGQSASPEYLQKLTYLCW 337
+ ++ + + GW +DP+G I L+IY I W T+ E V L G AS + K Y C
Sbjct: 651 IFPIVGSRL-GWPALDPIGGIALSIYIIYEWIETLWETVSKLSGAVASATEISKCLY-CV 708
Query: 338 NHHKAVRHIDTVRAYTFGSHYFVEVDIVLPSSMPLQEAHDIGEALQEKLERLPEIERAFV 397
+V + + G + VE DIVLP S+ L+E+HD+GE + E + +ER+++
Sbjct: 709 VRFNSVNSVSAFELFHSGDNLIVEADIVLPHSISLKESHDLGEIITYCTENITGVERSYI 768
Query: 398 HLDY 401
HLDY
Sbjct: 769 HLDY 772
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.322 0.136 0.408
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 10,640,482
Number of extensions: 373358
Number of successful extensions: 677
Number of sequences better than 1.0e-10: 7
Number of HSP's gapped: 670
Number of HSP's successfully gapped: 8
Length of query: 415
Length of database: 17,035,801
Length adjustment: 103
Effective length of query: 312
Effective length of database: 11,657,759
Effective search space: 3637220808
Effective search space used: 3637220808
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 157 (65.1 bits)