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Os03g0226400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Cation diffusion facilitator 8.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.2 (0.0313) R2 : 0.704
β1 : -- (--) R2dD : -- R2D : --
β2 : 2.21 (0.0828) R2dC : 0.477 R2C : 0.545
β3 : 1.2 (0.0814) R2dE : 0.145 R2E : 0.202
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.28 (0.0659) R2dN8 : 0.0166 R2N8 : 0.0123
σ : 0.588
deviance : 159.41
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C
peak time of C : 5.58
E
wheather : radiation
threshold : 40
memory length : 15
response mode : < th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
148.32 0.572 11.2 -4.46e-05 2.22 1.21 1.7 -0.952 0.28 5.88 29.15 10 -- --
152.08 0.574 11.2 0.0716 2.21 1.28 1.81 -- 0.302 6.09 28.63 10 -- --
155.36 0.581 11.2 0.0113 2.23 1.19 -- -0.98 0.273 5.84 28.51 10 -- --
159.52 0.588 11.2 0.0427 2.21 1.19 -- -- 0.296 5.81 30 15 -- --
218.1 0.688 11.2 0.365 -- 2.39 -- -1.3 0.479 -- 3.083 517 -- --
182.86 0.634 11.2 0.00998 2.52 -- 0.843 -- 0.261 4.23 -- -- -- --
184.79 0.637 11.2 0.00119 2.53 -- -- -- 0.256 4.19 -- -- -- --
206.88 0.67 11.2 0.153 -- 2.46 -- -- 0.379 -- 2.19 528 -- --
159.41 0.588 11.2 -- 2.21 1.2 -- -- 0.28 5.58 40 15 -- --
530.37 1.08 11.3 0.103 -- -- -- -- 0.323 -- -- -- -- --
184.79 0.636 11.2 -- 2.53 -- -- -- 0.256 4.19 -- -- -- --
207.47 0.671 11.3 -- -- 2.47 -- -- 0.357 -- 2.22 531 -- --
530.65 1.08 11.3 -- -- -- -- -- 0.312 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 140.34 humidity 50.0 270 > th dose dependent rect. 16 9
2 140.45 temperature 30.0 270 < th dose independent rect. 16 9
5 141.49 humidity 60.0 90 > th dose dependent rect. 19 8
7 141.60 temperature 10.0 720 > th dose dependent rect. 2 17
9 141.72 humidity 70.0 270 > th dose independent rect. 17 8
21 142.71 humidity 70.0 90 > th dose independent rect. 19 8
33 143.02 temperature 30.0 720 < th dose dependent sin 4 NA
36 143.10 temperature 30.0 720 < th dose dependent rect. 4 5
40 143.25 temperature 30.0 720 < th dose dependent rect. 1 16
49 143.49 temperature 30.0 720 < th dose dependent rect. 5 2
56 143.58 radiation 40.0 90 < th dose independent rect. 3 16
67 143.73 radiation 10.0 270 < th dose dependent rect. 16 9
90 144.15 precipitation 0.1 90 < th dose independent rect. 3 16
91 144.15 precipitation 0.1 90 < th dose dependent rect. 3 16
97 144.21 temperature 30.0 720 < th dose dependent rect. 3 12
104 144.34 temperature 15.0 270 > th dose dependent rect. 13 6
117 144.49 wind 7.0 90 < th dose independent rect. 3 16
119 144.51 radiation 1.0 270 < th dose independent rect. 16 9
130 144.68 temperature 30.0 720 < th dose dependent rect. 4 9
155 144.95 temperature 20.0 720 > th dose dependent sin 3 NA
156 144.96 radiation 40.0 90 < th dose dependent rect. 3 16
196 145.42 temperature 30.0 720 < th dose independent sin 11 NA
200 145.44 radiation 1.0 270 < th dose dependent sin 17 NA
201 145.45 temperature 20.0 270 > th dose dependent rect. 15 3
203 145.48 humidity 80.0 10 > th dose independent rect. 18 9
212 145.57 radiation 1.0 270 < th dose independent rect. 8 17
218 145.61 radiation 1.0 90 > th dose dependent rect. 6 10
224 145.66 temperature 20.0 720 < th dose independent rect. 5 2
254 145.80 radiation 1.0 270 < th dose dependent rect. 8 17
271 145.93 temperature 20.0 10 > th dose dependent rect. 16 4
288 146.05 temperature 10.0 720 > th dose dependent sin 1 NA
311 146.19 precipitation 0.1 270 < th dose independent rect. 14 15
312 146.19 precipitation 0.1 270 < th dose dependent rect. 14 15
314 146.22 temperature 10.0 10 > th dose dependent rect. 3 17
326 146.28 radiation 1.0 270 < th dose independent sin 16 NA
339 146.37 temperature 15.0 90 > th dose independent rect. 3 16
389 146.72 wind 9.0 90 < th dose independent rect. 19 8
390 146.72 temperature 10.0 90 > th dose independent rect. 19 8
391 146.72 temperature 30.0 90 < th dose independent rect. 19 8
392 146.72 humidity 50.0 90 > th dose independent rect. 19 8
394 146.72 atmosphere 995.0 90 > th dose independent rect. 19 8
395 146.72 radiation 1.0 90 < th dose independent rect. 19 8
401 146.72 atmosphere 1015.0 90 < th dose independent rect. 3 16
402 146.72 radiation 1.0 90 < th dose dependent rect. 19 8
418 146.84 radiation 30.0 10 < th dose dependent rect. 16 23
425 146.88 radiation 30.0 10 < th dose dependent rect. 12 23
464 147.17 radiation 30.0 10 < th dose dependent rect. 23 23
495 147.36 radiation 1.0 90 > th dose dependent sin 3 NA
522 147.47 temperature 10.0 720 > th dose dependent rect. 12 23
538 147.53 humidity 90.0 90 < th dose dependent rect. 16 14
540 147.54 atmosphere 995.0 90 > th dose independent rect. 3 16
545 147.57 temperature 20.0 720 < th dose independent rect. 4 4
552 147.58 temperature 10.0 720 > th dose dependent rect. 7 22
554 147.59 radiation 30.0 10 < th dose dependent rect. 16 17
585 147.73 radiation 30.0 10 < th dose dependent rect. 16 19
638 147.88 temperature 25.0 1440 > th dose dependent rect. 14 1
658 147.99 radiation 30.0 10 < th dose dependent rect. 21 23
659 148.00 temperature 10.0 270 > th dose dependent rect. 14 16
665 148.03 radiation 40.0 10 < th dose dependent rect. 3 17
676 148.09 wind 9.0 90 < th dose dependent rect. 19 8
703 148.21 radiation 1.0 270 < th dose dependent rect. 4 22
714 148.24 radiation 40.0 270 < th dose dependent rect. 23 10
737 148.34 radiation 30.0 10 < th dose dependent no NA NA
759 148.40 temperature 15.0 720 > th dose dependent no NA NA
786 148.52 radiation 20.0 270 < th dose independent rect. 23 10
806 148.58 wind 9.0 270 < th dose independent rect. 14 15
811 148.60 precipitation 0.1 90 < th dose independent rect. 19 8
812 148.60 temperature 25.0 1440 > th dose dependent rect. 14 3
813 148.60 precipitation 0.1 90 < th dose dependent rect. 19 8
836 148.62 temperature 10.0 720 > th dose dependent rect. 10 23
881 148.74 precipitation 0.1 270 < th dose independent rect. 5 9
882 148.74 precipitation 0.1 270 < th dose dependent rect. 5 9
885 148.74 temperature 15.0 720 > th dose dependent rect. 16 23
897 148.79 atmosphere 995.0 90 > th dose dependent rect. 19 8
921 148.86 radiation 10.0 90 > th dose independent rect. 6 10
966 148.95 temperature 10.0 270 > th dose independent rect. 5 9
967 148.95 atmosphere 995.0 270 > th dose independent rect. 5 9
968 148.95 atmosphere 1015.0 270 < th dose independent rect. 5 9
969 148.95 temperature 10.0 270 > th dose independent rect. 14 15
989 149.02 radiation 1.0 30 > th dose dependent rect. 9 23