BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0226400 Os03g0226400|AK065961
(441 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G58060.1 | chr3:21497778-21499676 REVERSE LENGTH=412 551 e-157
AT1G79520.2 | chr1:29912369-29914515 REVERSE LENGTH=415 356 2e-98
AT1G16310.1 | chr1:5578435-5580585 FORWARD LENGTH=429 350 1e-96
AT2G39450.1 | chr2:16471744-16473735 REVERSE LENGTH=395 323 1e-88
AT2G47830.1 | chr2:19591094-19593973 REVERSE LENGTH=472 52 6e-07
>AT3G58060.1 | chr3:21497778-21499676 REVERSE LENGTH=412
Length = 411
Score = 551 bits (1421), Expect = e-157, Method: Compositional matrix adjust.
Identities = 271/395 (68%), Positives = 322/395 (81%), Gaps = 7/395 (1%)
Query: 51 NDARAPLLAERRRNSVGSMRGEFVSRLPKKVLDAVDPERPSHVDFSRSKGLREGEKEYYE 110
ND A + V SM+ F + LP+K+ +DPE P H+D S++ GL+E EKEYYE
Sbjct: 15 NDHEAIDHKPKLTGMVSSMKSNFFADLPQKLRSKIDPENPLHLDVSKAAGLKEDEKEYYE 74
Query: 111 KQFATLRSFEEVDSI----EESNVMSEEDDIAEQKQ--SEFAMKISNYANMILLALKIYA 164
+Q ATL+SFEEV+S +E + +E++ ++ E AM+ISN+AN+ LLALKIYA
Sbjct: 75 RQLATLKSFEEVESFLARSDEYTIDEKEEEEDRAERAAQELAMQISNWANIFLLALKIYA 134
Query: 165 TIKSGSIAIAASTLDSLLDLMAGGILWFTHLSMKSINVYKYPIGKLRVQPVGIIIFAAVM 224
T+KSGSIAIAASTLDSLLDLMAGGILWFTHLSMK++N+YKYPIGKLRVQPVGIIIFAAVM
Sbjct: 135 TVKSGSIAIAASTLDSLLDLMAGGILWFTHLSMKNVNIYKYPIGKLRVQPVGIIIFAAVM 194
Query: 225 ATLGFQVFVQAVEKLIVNETPDKLTPVQLTWLYSIMIFATVVKLALWLYCRTSGNKIVRA 284
ATLGFQV + A E+LI NE +K+ VQL WLYSIM+ AT +KL LW+YC++S N IVRA
Sbjct: 195 ATLGFQVLLVAAEQLISNEPSEKMNHVQLIWLYSIMLSATAIKLVLWIYCKSSRNHIVRA 254
Query: 285 YAKDHYFDVVTNVVGLAAAVLGDMFYWWIDPVGAIALAVYTITNWSGTVWENAVSLVGES 344
YAKDH+FDVVTNV+GL AAVL + FYWW+DP GAI LA+YTI NWSGTV ENAVSL+G+S
Sbjct: 255 YAKDHHFDVVTNVLGLVAAVLANAFYWWLDPTGAILLAIYTIVNWSGTVMENAVSLIGQS 314
Query: 345 APPEMLQKLTYLAIRH-HPQIKRVDTVRAYTFGVLYFVEVDIELPEELPLKEAHAIGESL 403
APPE+LQKLTYL +R IK VDTVRAYTFGVLYFVEVDIELPE+LPLKEAHAIGESL
Sbjct: 315 APPEVLQKLTYLVMRQGGDNIKHVDTVRAYTFGVLYFVEVDIELPEDLPLKEAHAIGESL 374
Query: 404 QIKIEELPEVERAFVHLDFECDHKPEHNILSKLPS 438
QIK+EELPEVERAFVHLDFEC HKPEH++LS +P+
Sbjct: 375 QIKLEELPEVERAFVHLDFECHHKPEHSVLSTIPN 409
>AT1G79520.2 | chr1:29912369-29914515 REVERSE LENGTH=415
Length = 414
Score = 356 bits (913), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 183/328 (55%), Positives = 245/328 (74%), Gaps = 5/328 (1%)
Query: 107 EYYEKQFATLRSFEEVDSIEESNVMS---EEDDIAEQKQSE-FAMKISNYANMILLALKI 162
EYY++Q L F E+++I E+ +S E+++ + +SE A+ ISN AN++L K+
Sbjct: 84 EYYKQQEKLLEGFNEMETINETGFVSGAPTEEELKKLAKSERLAVHISNAANLVLFVAKV 143
Query: 163 YATIKSGSIAIAASTLDSLLDLMAGGILWFTHLSMKSINVYKYPIGKLRVQPVGIIIFAA 222
YA+++S S+A+ ASTLDSLLDL++G ILWFT +M++ N ++YPIGK R+QPVGII+FA+
Sbjct: 144 YASVESRSMAVIASTLDSLLDLLSGFILWFTANAMRTPNNFRYPIGKRRMQPVGIIVFAS 203
Query: 223 VMATLGFQVFVQAVEKLIVNETPDKLTPVQLTWLYSIMIFATVVKLALWLYCRTSGNKIV 282
VMATLG QV +++ +L+V++ ++ + W+ IM ATVVK L LYCR+ N+IV
Sbjct: 204 VMATLGLQVILEST-RLLVSKNGSHMSSTEEKWMIGIMASATVVKFLLMLYCRSFQNEIV 262
Query: 283 RAYAKDHYFDVVTNVVGLAAAVLGDMFYWWIDPVGAIALAVYTITNWSGTVWENAVSLVG 342
RAYA+DH FDV+TN VGLA AVL FYWWIDP GAI +A+YTI+ W+ TV EN SL+G
Sbjct: 263 RAYAQDHLFDVITNSVGLATAVLAVKFYWWIDPSGAILIALYTISTWARTVLENVHSLIG 322
Query: 343 ESAPPEMLQKLTYLAIRHHPQIKRVDTVRAYTFGVLYFVEVDIELPEELPLKEAHAIGES 402
SAPP+ L KLT+L HH +IK +DTVRAYTFG YFVEVDI LPE++ L EAH IGE+
Sbjct: 323 RSAPPDFLAKLTFLIWNHHEKIKHIDTVRAYTFGSHYFVEVDIVLPEDMRLHEAHNIGET 382
Query: 403 LQIKIEELPEVERAFVHLDFECDHKPEH 430
LQ K+E+L EVERAFVH+DFE H+PEH
Sbjct: 383 LQEKLEQLSEVERAFVHIDFEFTHRPEH 410
>AT1G16310.1 | chr1:5578435-5580585 FORWARD LENGTH=429
Length = 428
Score = 350 bits (897), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 182/328 (55%), Positives = 235/328 (71%), Gaps = 5/328 (1%)
Query: 107 EYYEKQFATLRSFEEVDSIEE----SNVMSEEDDIAEQKQSEFAMKISNYANMILLALKI 162
EYY+KQ L F E+++I E S V +EE+ K A+ ISN N++L K+
Sbjct: 99 EYYKKQERLLEGFNEMETIHENGFASGVPTEEEMKKLAKSERLAVHISNATNLVLFVAKV 158
Query: 163 YATIKSGSIAIAASTLDSLLDLMAGGILWFTHLSMKSINVYKYPIGKLRVQPVGIIIFAA 222
YA+++S S+A+ ASTLDSLLDL++G ILWFT +M+ N + YPIGK R+QPVGII+FA+
Sbjct: 159 YASMESRSMAVIASTLDSLLDLLSGFILWFTANAMRKPNQFHYPIGKRRMQPVGIIVFAS 218
Query: 223 VMATLGFQVFVQAVEKLIVNETPDKLTPVQLTWLYSIMIFATVVKLALWLYCRTSGNKIV 282
VMATLG QV +++ +L+ ++ + + W+ IM+ T+VK L LYCR N+IV
Sbjct: 219 VMATLGLQVLLESGRQLVA-KSGIHMNSTEEKWMIGIMVSVTIVKFLLMLYCRGFQNEIV 277
Query: 283 RAYAKDHYFDVVTNVVGLAAAVLGDMFYWWIDPVGAIALAVYTITNWSGTVWENAVSLVG 342
RAYA+DH FDVVTN +GLA AVL FYWWIDP GAI +A+YTI W+ TV EN SL+G
Sbjct: 278 RAYAQDHLFDVVTNSIGLATAVLAVKFYWWIDPTGAILIALYTIATWARTVLENVHSLIG 337
Query: 343 ESAPPEMLQKLTYLAIRHHPQIKRVDTVRAYTFGVLYFVEVDIELPEELPLKEAHAIGES 402
SAPP+ L KLT+L HH QIK +DTVRAYTFG YFVEVDI LPE++ L+EAH IGE+
Sbjct: 338 RSAPPDFLAKLTFLIWNHHEQIKHIDTVRAYTFGSHYFVEVDIVLPEDMRLQEAHNIGET 397
Query: 403 LQIKIEELPEVERAFVHLDFECDHKPEH 430
LQ K+E+L EVERAFVH+DFE H+PEH
Sbjct: 398 LQEKLEQLAEVERAFVHIDFEFTHRPEH 425
>AT2G39450.1 | chr2:16471744-16473735 REVERSE LENGTH=395
Length = 394
Score = 323 bits (828), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 184/334 (55%), Positives = 242/334 (72%), Gaps = 3/334 (0%)
Query: 100 GLREGEKEYYEKQFATLRSFEEVDSIEESNV---MSEEDDIAEQKQSEFAMKISNYANMI 156
G + +YY++Q L F E+D + E MS+E+ K A++ISN ANM+
Sbjct: 56 GPEDNVADYYQQQVEMLEGFTEMDELAERGFVPGMSKEEQDNLAKSETLAIRISNIANML 115
Query: 157 LLALKIYATIKSGSIAIAASTLDSLLDLMAGGILWFTHLSMKSINVYKYPIGKLRVQPVG 216
L A K+YA++ SGS+AI ASTLDSLLDL++G ILWFT SM++ N Y+YPIGK R+QP+G
Sbjct: 116 LFAAKVYASVTSGSLAIIASTLDSLLDLLSGFILWFTAFSMQTPNPYQYPIGKKRMQPLG 175
Query: 217 IIIFAAVMATLGFQVFVQAVEKLIVNETPDKLTPVQLTWLYSIMIFATVVKLALWLYCRT 276
I++FA+VMATLG Q+ ++++ ++ + LT Q +W+ IM+ T+VKL L LYCR+
Sbjct: 176 ILVFASVMATLGLQIILESLRTMLSSHKEFNLTKEQESWVVGIMLSVTLVKLLLVLYCRS 235
Query: 277 SGNKIVRAYAKDHYFDVVTNVVGLAAAVLGDMFYWWIDPVGAIALAVYTITNWSGTVWEN 336
N+IV+AYA+DH+FDV+TN++GL A +L + +WIDPVGAI LA+YTI WS TV EN
Sbjct: 236 FTNEIVKAYAQDHFFDVITNIIGLIAVILANYIDYWIDPVGAIILALYTIRTWSMTVLEN 295
Query: 337 AVSLVGESAPPEMLQKLTYLAIRHHPQIKRVDTVRAYTFGVLYFVEVDIELPEELPLKEA 396
SLVG+SA PE LQKLTYL HH I+ +DTVRAYTFG YFVEVDI LP ++PL+ A
Sbjct: 296 VNSLVGKSARPEYLQKLTYLCWNHHKAIRHIDTVRAYTFGSHYFVEVDIVLPADMPLQVA 355
Query: 397 HAIGESLQIKIEELPEVERAFVHLDFECDHKPEH 430
H IGESLQ K+E L E+ERAFVHLD+E HKPEH
Sbjct: 356 HDIGESLQEKLELLEEIERAFVHLDYEYTHKPEH 389
>AT2G47830.1 | chr2:19591094-19593973 REVERSE LENGTH=472
Length = 471
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 68/323 (21%), Positives = 144/323 (44%), Gaps = 38/323 (11%)
Query: 141 KQSEFAMKISNYANMILLALKIYATIKSGSIAIAASTLDSLLDLMAGGILWFTHLSMKSI 200
++ E ++ A++ L K GS AI A S+ D++ G+ +S ++
Sbjct: 71 EEGEKIFRLGLTADIGLSVAKALTGYLCGSTAIIADAAHSVSDVVLSGVAL---VSYRAA 127
Query: 201 NVYK---YPIGKLRVQPVGIIIFAAVMATLGFQVFVQAVEKLIV--NETPDKLTPVQLTW 255
NV K +P G + + +G + +A++ G + A++ L + + P+ +
Sbjct: 128 NVPKDKEHPYGHGKFETLGALGISAMLLATGSGIAWHALDLLSIALSAAPEVIHSGHHHG 187
Query: 256 L--------YSIMIFATVVKLALWLYCRTSGNK----IVRAYAKDHYFDVVTNVV---GL 300
+ ++ I + +K L+ + +G K ++ A A H D ++++V G+
Sbjct: 188 IDMNHPILALTVTIASISIKEGLYWITKRAGEKQGSGLMMANAWHHRSDAISSLVALVGV 247
Query: 301 AAAVLGDMFYWWIDPVGAIALAVYTITNWSGTVWENAVSLVGESAPPEMLQKL--TYLAI 358
++LG F +DP+ + ++ + T ++ + LV + P + L+ + T L +
Sbjct: 248 GGSILGVNF---LDPLAGLVVSTMIVNAGLKTGHQSILELVDAAIPAQQLEPIRQTILQV 304
Query: 359 RHHPQIKRVDTVRAYTFGVLYFVEVDIELPEELPLKEAHAIGESLQIKIE-ELPEVERAF 417
+K +R G +++V I + + AH +GE ++ +I PEV F
Sbjct: 305 E---GVKGCHRLRGRRAGSSLYLDVHIVVDPFSSVSVAHEVGEYVRRQINLNHPEVSEVF 361
Query: 418 VHLD-----FECDHKPEHNILSK 435
+H+D F C K +H+ ++K
Sbjct: 362 IHIDPAFLQFSCSTK-DHDSITK 383
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.319 0.134 0.390
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 8,436,398
Number of extensions: 343234
Number of successful extensions: 1066
Number of sequences better than 1.0e-05: 5
Number of HSP's gapped: 1060
Number of HSP's successfully gapped: 5
Length of query: 441
Length of database: 11,106,569
Length adjustment: 102
Effective length of query: 339
Effective length of database: 8,310,137
Effective search space: 2817136443
Effective search space used: 2817136443
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 113 (48.1 bits)