Os01g0837800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Cation diffusion facilitator 8.
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Os01g0837800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Cation diffusion facilitator 8.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 48.06 | 0.326 | 13.1 | 0.284 | 1.92 | 1.04 | 0.61 | -0.481 | 0.195 | 7.37 | 22.24 | 245 | -- | -- |
| 48.87 | 0.326 | 13.1 | 0.288 | 1.9 | 1.07 | 0.689 | -- | 0.195 | 7.44 | 22.64 | 246 | -- | -- |
| 49.04 | 0.326 | 13.1 | 0.293 | 1.93 | 1.01 | -- | -0.547 | 0.191 | 7.3 | 22.41 | 241 | -- | -- |
| 50.06 | 0.33 | 13.1 | 0.295 | 1.92 | 1 | -- | -- | 0.191 | 7.21 | 25.05 | 246 | -- | -- |
| 62.51 | 0.368 | 13.1 | 0.75 | -- | 2.65 | -- | 0.624 | 0.314 | -- | 3.067 | 695 | -- | -- |
| 62.98 | 0.372 | 13.2 | 0.224 | 2.3 | -- | 0.239 | -- | 0.122 | 5.76 | -- | -- | -- | -- |
| 63.12 | 0.372 | 13.2 | 0.225 | 2.3 | -- | -- | -- | 0.121 | 5.75 | -- | -- | -- | -- |
| 56.98 | 0.352 | 13.2 | 0.379 | -- | 2.81 | -- | -- | 0.261 | -- | 3.725 | 706 | -- | -- |
| 52.33 | 0.337 | 13.1 | -- | 1.94 | 0.958 | -- | -- | 0.156 | 7.11 | 25.42 | 244 | -- | -- |
| 337.49 | 0.858 | 13.2 | 0.297 | -- | -- | -- | -- | 0.176 | -- | -- | -- | -- | -- |
| 64.45 | 0.376 | 13.2 | -- | 2.3 | -- | -- | -- | 0.0961 | 5.74 | -- | -- | -- | -- |
| 60.55 | 0.362 | 13.2 | -- | -- | 2.8 | -- | -- | 0.224 | -- | 4.664 | 703 | -- | -- |
| 339.82 | 0.86 | 13.2 | -- | -- | -- | -- | -- | 0.143 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 45.12 | radiation | 20.0 | 270 | < th | dose dependent | rect. | 13 | 20 |
| 8 | 45.90 | humidity | 70.0 | 270 | > th | dose independent | rect. | 1 | 19 |
| 21 | 46.51 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 9 | 16 |
| 25 | 46.78 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 3 | 17 |
| 26 | 46.81 | radiation | 20.0 | 270 | < th | dose dependent | rect. | 24 | 23 |
| 38 | 47.06 | radiation | 20.0 | 270 | < th | dose dependent | rect. | 22 | 23 |
| 47 | 47.17 | radiation | 40.0 | 270 | < th | dose dependent | sin | 1 | NA |
| 48 | 47.17 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 1 | 20 |
| 49 | 47.21 | radiation | 20.0 | 270 | < th | dose independent | rect. | 2 | 18 |
| 55 | 47.32 | radiation | 20.0 | 270 | < th | dose independent | rect. | 1 | 20 |
| 56 | 47.33 | radiation | 20.0 | 270 | < th | dose dependent | rect. | 11 | 9 |
| 57 | 47.34 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 6 | 10 |
| 78 | 47.54 | radiation | 20.0 | 270 | < th | dose dependent | rect. | 13 | 7 |
| 91 | 47.68 | humidity | 60.0 | 270 | > th | dose dependent | rect. | 2 | 18 |
| 101 | 47.78 | radiation | 40.0 | 270 | < th | dose independent | rect. | 1 | 20 |
| 144 | 48.06 | radiation | 40.0 | 270 | < th | dose independent | rect. | 3 | 17 |
| 154 | 48.15 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 2 | 18 |
| 162 | 48.21 | radiation | 20.0 | 270 | < th | dose independent | rect. | 13 | 20 |
| 182 | 48.33 | radiation | 20.0 | 270 | < th | dose dependent | rect. | 7 | 13 |
| 189 | 48.36 | radiation | 1.0 | 90 | > th | dose independent | sin | 22 | NA |
| 199 | 48.41 | radiation | 20.0 | 270 | < th | dose dependent | no | NA | NA |
| 214 | 48.48 | radiation | 20.0 | 270 | < th | dose independent | rect. | 13 | 8 |
| 230 | 48.58 | radiation | 1.0 | 270 | > th | dose independent | sin | 0 | NA |
| 275 | 48.80 | radiation | 20.0 | 270 | < th | dose independent | rect. | 11 | 9 |
| 276 | 48.80 | temperature | 30.0 | 270 | < th | dose independent | rect. | 2 | 18 |
| 297 | 48.93 | radiation | 20.0 | 270 | < th | dose independent | rect. | 15 | 15 |
| 310 | 49.00 | radiation | 10.0 | 270 | > th | dose independent | rect. | 7 | 10 |
| 311 | 49.00 | temperature | 30.0 | 90 | < th | dose independent | rect. | 4 | 17 |
| 334 | 49.10 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 13 | 7 |
| 405 | 49.25 | radiation | 10.0 | 270 | > th | dose independent | no | NA | NA |
| 494 | 49.30 | wind | 7.0 | 270 | < th | dose independent | rect. | 11 | 14 |
| 495 | 49.30 | radiation | 10.0 | 720 | > th | dose independent | rect. | 12 | 20 |
| 496 | 49.30 | radiation | 10.0 | 270 | > th | dose independent | rect. | 11 | 23 |
| 519 | 49.37 | radiation | 20.0 | 270 | < th | dose independent | rect. | 9 | 11 |
| 531 | 49.39 | radiation | 1.0 | 270 | > th | dose dependent | rect. | 11 | 23 |
| 532 | 49.40 | radiation | 10.0 | 270 | < th | dose independent | rect. | 7 | 13 |
| 556 | 49.46 | radiation | 40.0 | 270 | < th | dose independent | rect. | 1 | 10 |
| 617 | 49.62 | humidity | 70.0 | 270 | > th | dose independent | rect. | 13 | 7 |
| 642 | 49.66 | radiation | 20.0 | 270 | < th | dose independent | sin | 1 | NA |
| 669 | 49.73 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 11 | 14 |
| 670 | 49.73 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 11 | 14 |
| 694 | 49.81 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 11 | 9 |
| 790 | 50.05 | radiation | 1.0 | 270 | > th | dose dependent | rect. | 6 | 11 |
| 793 | 50.06 | radiation | 40.0 | 270 | < th | dose independent | rect. | 9 | 12 |
| 796 | 50.06 | radiation | 10.0 | 720 | < th | dose dependent | sin | 13 | NA |
| 837 | 50.11 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 20 | 20 |
| 878 | 50.18 | radiation | 1.0 | 270 | > th | dose dependent | no | NA | NA |
| 908 | 50.18 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 19 | 21 |