Os02g0775100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Cation diffusion facilitator 8.
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Os02g0775100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Cation diffusion facilitator 8.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 43.12 | 0.309 | 12.5 | -0.318 | 2.34 | 1.31 | 0.0991 | -0.477 | 0.207 | 9.01 | 16.43 | 7 | -- | -- |
| 43.33 | 0.307 | 12.4 | -0.247 | 2.34 | 1.33 | 0.0519 | -- | 0.224 | 9 | 16.15 | 7 | -- | -- |
| 43.14 | 0.306 | 12.5 | -0.308 | 2.34 | 1.29 | -- | -0.444 | 0.208 | 9.01 | 16.78 | 6 | -- | -- |
| 43.31 | 0.307 | 12.4 | -0.244 | 2.34 | 1.33 | -- | -- | 0.227 | 9.01 | 15.99 | 6 | -- | -- |
| 347.38 | 0.873 | 12.6 | -0.527 | -- | 2 | -- | -1.02 | 0.1 | -- | 16.78 | 6 | -- | -- |
| 62.52 | 0.371 | 12.4 | 0.026 | 2.44 | -- | 0.00396 | -- | 0.426 | 9.64 | -- | -- | -- | -- |
| 62.52 | 0.37 | 12.4 | 0.0262 | 2.44 | -- | -- | -- | 0.426 | 9.64 | -- | -- | -- | -- |
| 348.22 | 0.873 | 12.5 | -0.367 | -- | 1.9 | -- | -- | 0.144 | -- | 17.5 | 4 | -- | -- |
| 44.73 | 0.311 | 12.4 | -- | 2.34 | 1.19 | -- | -- | 0.264 | 9.04 | 16.8 | 6 | -- | -- |
| 416.5 | 0.954 | 12.5 | 0.00585 | -- | -- | -- | -- | 0.431 | -- | -- | -- | -- | -- |
| 62.54 | 0.37 | 12.4 | -- | 2.44 | -- | -- | -- | 0.424 | 9.64 | -- | -- | -- | -- |
| 351.29 | 0.873 | 12.5 | -- | -- | 1.78 | -- | -- | 0.194 | -- | 17.7 | 2 | -- | -- |
| 416.5 | 0.953 | 12.5 | -- | -- | -- | -- | -- | 0.43 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 39.64 | temperature | 30 | 90 | < th | dose dependent | rect. | 23 | 20 |
| 2 | 39.68 | temperature | 10 | 10 | > th | dose dependent | sin | 5 | NA |
| 3 | 39.68 | temperature | 20 | 30 | > th | dose dependent | rect. | 19 | 21 |
| 5 | 39.76 | temperature | 20 | 10 | > th | dose dependent | rect. | 4 | 12 |
| 24 | 40.34 | temperature | 30 | 30 | < th | dose dependent | sin | 5 | NA |
| 36 | 40.75 | temperature | 20 | 10 | > th | dose dependent | rect. | 19 | 23 |
| 71 | 41.62 | temperature | 15 | 270 | > th | dose dependent | rect. | 17 | 22 |
| 90 | 42.07 | temperature | 30 | 270 | < th | dose dependent | rect. | 22 | 12 |
| 94 | 42.25 | temperature | 30 | 10 | < th | dose dependent | rect. | 22 | 22 |
| 105 | 42.43 | temperature | 20 | 10 | > th | dose dependent | rect. | 4 | 20 |
| 113 | 42.49 | temperature | 30 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 122 | 42.66 | temperature | 30 | 30 | < th | dose dependent | rect. | 7 | 23 |
| 128 | 42.76 | temperature | 20 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 180 | 43.16 | temperature | 20 | 10 | > th | dose dependent | rect. | 1 | 23 |
| 188 | 43.24 | temperature | 30 | 10 | < th | dose dependent | rect. | 24 | 19 |
| 189 | 43.25 | temperature | 15 | 10 | > th | dose dependent | no | NA | NA |
| 207 | 43.38 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 10 |
| 244 | 43.65 | temperature | 20 | 720 | > th | dose dependent | rect. | 19 | 12 |
| 248 | 43.67 | temperature | 30 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 251 | 43.69 | temperature | 30 | 10 | < th | dose dependent | no | NA | NA |
| 253 | 43.70 | temperature | 30 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 254 | 43.71 | temperature | 15 | 270 | > th | dose dependent | rect. | 1 | 12 |
| 255 | 43.71 | temperature | 30 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 268 | 43.82 | temperature | 30 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 319 | 44.13 | temperature | 15 | 10 | > th | dose dependent | rect. | 8 | 23 |
| 327 | 44.17 | temperature | 25 | 10 | > th | dose independent | rect. | 4 | 12 |
| 406 | 44.67 | temperature | 25 | 90 | < th | dose dependent | rect. | 1 | 22 |
| 461 | 44.95 | temperature | 30 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 473 | 45.01 | temperature | 20 | 720 | > th | dose dependent | rect. | 4 | 1 |
| 530 | 45.28 | temperature | 30 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 549 | 45.33 | temperature | 20 | 720 | > th | dose dependent | rect. | 2 | 3 |
| 561 | 45.36 | temperature | 30 | 10 | < th | dose dependent | rect. | 19 | 23 |
| 587 | 45.49 | temperature | 30 | 10 | < th | dose dependent | rect. | 24 | 14 |
| 595 | 45.51 | temperature | 20 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 643 | 45.70 | temperature | 30 | 10 | < th | dose dependent | rect. | 24 | 12 |
| 659 | 45.75 | temperature | 25 | 720 | < th | dose dependent | rect. | 20 | 11 |
| 665 | 45.75 | temperature | 20 | 10 | > th | dose dependent | rect. | 6 | 23 |
| 682 | 45.83 | temperature | 25 | 720 | < th | dose dependent | sin | 11 | NA |
| 701 | 45.88 | temperature | 25 | 90 | < th | dose dependent | rect. | 3 | 16 |
| 734 | 45.98 | temperature | 25 | 720 | < th | dose dependent | rect. | 21 | 8 |
| 770 | 46.06 | temperature | 30 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 912 | 46.42 | temperature | 30 | 720 | < th | dose dependent | rect. | 22 | 5 |
| 981 | 46.57 | temperature | 20 | 10 | > th | dose dependent | rect. | 15 | 23 |