BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os01g0380700 Os01g0380700|Os01g0380700
         (120 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os01g0380700  Similar to Protein kinase                           246   2e-66
Os06g0168800  Similar to Protein kinase                            84   3e-17
Os01g0588500  Similar to Avr9/Cf-9 induced kinase 1                67   4e-12
Os09g0361100  Similar to Protein kinase                            66   5e-12

>Os01g0380700 Similar to Protein kinase
          Length = 120

 Score =  246 bits (629), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 120/120 (100%), Positives = 120/120 (100%)

Query: 1   MVGCLTEPSFFLFWQRRPSYSDSSALVPQMGGGNESFGVVLLEMLTGRRSMDKKRPAGFG 60
           MVGCLTEPSFFLFWQRRPSYSDSSALVPQMGGGNESFGVVLLEMLTGRRSMDKKRPAGFG
Sbjct: 1   MVGCLTEPSFFLFWQRRPSYSDSSALVPQMGGGNESFGVVLLEMLTGRRSMDKKRPAGFG 60

Query: 61  YVFKGWIDPNITSPAKLGTDLTVVVRSLEQDALQGHREWVVPVFRLKPAPIRTMKVPVLN 120
           YVFKGWIDPNITSPAKLGTDLTVVVRSLEQDALQGHREWVVPVFRLKPAPIRTMKVPVLN
Sbjct: 61  YVFKGWIDPNITSPAKLGTDLTVVVRSLEQDALQGHREWVVPVFRLKPAPIRTMKVPVLN 120



>Os06g0168800 Similar to Protein kinase
          Length = 411

 Score = 84.0 bits (206), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 38/46 (82%), Positives = 40/46 (86%)

Query: 58  GFGYVFKGWIDPNITSPAKLGTDLTVVVRSLEQDALQGHREWVVPV 103
           GFGYVFKGWIDPN TSPAK GT LTV V+SL+QDALQGHREWV  V
Sbjct: 116 GFGYVFKGWIDPNSTSPAKPGTGLTVAVKSLKQDALQGHREWVAEV 161



>Os01g0588500 Similar to Avr9/Cf-9 induced kinase 1
          Length = 494

 Score = 66.6 bits (161), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 29/47 (61%), Positives = 34/47 (72%)

Query: 57  AGFGYVFKGWIDPNITSPAKLGTDLTVVVRSLEQDALQGHREWVVPV 103
            GFG VFKGWI+ N T+P K GT LTV V++L  D LQGH+EWV  V
Sbjct: 149 GGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWVAEV 195



>Os09g0361100 Similar to Protein kinase
          Length = 384

 Score = 66.2 bits (160), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 29/46 (63%), Positives = 34/46 (73%)

Query: 58  GFGYVFKGWIDPNITSPAKLGTDLTVVVRSLEQDALQGHREWVVPV 103
           GFG VFKGWI+ N T+P K GT LTV V++L  D LQGH+EWV  V
Sbjct: 42  GFGCVFKGWIEENGTAPMKPGTGLTVAVKTLNHDGLQGHKEWVAEV 87



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.322    0.139    0.437 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 4,692,359
Number of extensions: 192923
Number of successful extensions: 1364
Number of sequences better than 1.0e-10: 4
Number of HSP's gapped: 1364
Number of HSP's successfully gapped: 4
Length of query: 120
Length of database: 17,035,801
Length adjustment: 86
Effective length of query: 34
Effective length of database: 12,545,397
Effective search space: 426543498
Effective search space used: 426543498
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 149 (62.0 bits)