Os01g0380700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Protein kinase.
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Os01g0380700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Protein kinase.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 59.87 | 0.364 | 9.18 | -0.113 | 1.05 | 0.879 | 0.107 | 1.48 | -0.442 | 23.7 | 48 | 2585 | -- | -- |
| 61.72 | 0.366 | 9.18 | 0.0339 | 1.06 | 1.04 | -0.0597 | -- | -0.408 | 23.7 | 47.96 | 2595 | -- | -- |
| 59.92 | 0.361 | 9.18 | -0.112 | 1.05 | 0.881 | -- | 1.42 | -0.441 | 23.7 | 48 | 2592 | -- | -- |
| 61.24 | 0.364 | 9.15 | -0.0202 | 1.04 | 1.03 | -- | -- | -0.305 | 23.7 | 66.13 | 2642 | -- | -- |
| 94.39 | 0.455 | 9.16 | 0.0314 | -- | 0.866 | -- | 0.029 | -0.449 | -- | 59 | 7394 | -- | -- |
| 78.64 | 0.416 | 9.19 | 0.0273 | 0.909 | -- | -0.153 | -- | -0.483 | 23.6 | -- | -- | -- | -- |
| 78.74 | 0.416 | 9.19 | 0.0335 | 0.909 | -- | -- | -- | -0.482 | 23.6 | -- | -- | -- | -- |
| 94.02 | 0.454 | 9.16 | 0.0302 | -- | 0.793 | -- | -- | -0.423 | -- | 65.64 | 7387 | -- | -- |
| 61.22 | 0.364 | 9.15 | -- | 1.03 | 1.02 | -- | -- | -0.306 | 23.7 | 66 | 2667 | -- | -- |
| 130.68 | 0.534 | 9.17 | 0.0587 | -- | -- | -- | -- | -0.472 | -- | -- | -- | -- | -- |
| 78.77 | 0.415 | 9.19 | -- | 0.91 | -- | -- | -- | -0.486 | 23.6 | -- | -- | -- | -- |
| 94.02 | 0.453 | 9.16 | -- | -- | 0.8 | -- | -- | -0.429 | -- | 65.03 | 8847 | -- | -- |
| 130.77 | 0.534 | 9.17 | -- | -- | -- | -- | -- | -0.479 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 56.24 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 2 | 56.32 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 16 | 5 |
| 15 | 56.49 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 19 | 1 |
| 16 | 56.58 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 17 | 56.58 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 13 | 1 |
| 18 | 56.61 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 18 | 1 |
| 20 | 56.67 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 18 | 14 |
| 21 | 56.76 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 19 | 1 |
| 22 | 56.79 | wind | 3.0 | 43200 | < th | dose independent | rect. | 4 | 3 |
| 23 | 56.82 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 5 | 2 |
| 24 | 56.85 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 19 | 1 |
| 25 | 56.85 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 19 | 1 |
| 26 | 56.89 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 16 | 4 |
| 39 | 56.91 | wind | 3.0 | 43200 | > th | dose independent | rect. | 4 | 3 |
| 45 | 57.06 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 1 | 16 |
| 46 | 57.07 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 9 | 11 |
| 47 | 57.07 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 1 | 16 |
| 48 | 57.07 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 1 | 16 |
| 49 | 57.07 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 1 | 16 |
| 52 | 57.09 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 85 | 57.19 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 88 | 57.20 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 16 | 4 |
| 103 | 57.22 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 16 | 8 |
| 104 | 57.22 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 16 | 10 |
| 125 | 57.33 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 13 | 4 |
| 127 | 57.35 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 5 | 2 |
| 135 | 57.42 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 9 | 11 |
| 155 | 57.48 | humidity | 70.0 | 14400 | < th | dose dependent | sin | 13 | NA |
| 157 | 57.50 | wind | 1.0 | 43200 | > th | dose independent | rect. | 1 | 1 |
| 159 | 57.51 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 8 | 8 |
| 165 | 57.54 | humidity | 60.0 | 14400 | > th | dose dependent | rect. | 15 | 1 |
| 169 | 57.56 | humidity | 60.0 | 14400 | < th | dose independent | sin | 13 | NA |
| 177 | 57.58 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 1 | 6 |
| 178 | 57.58 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 11 | 6 |
| 181 | 57.62 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 13 | 4 |
| 187 | 57.63 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 13 | 4 |
| 190 | 57.63 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 13 | 4 |
| 193 | 57.66 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 18 | 14 |
| 196 | 57.68 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 221 | 57.71 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 14 | 1 |
| 223 | 57.71 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 13 | 6 |
| 226 | 57.74 | humidity | 60.0 | 14400 | > th | dose independent | sin | 13 | NA |
| 230 | 57.75 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 14 | 1 |
| 241 | 57.78 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 13 | 5 |
| 251 | 57.81 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 9 | 6 |
| 284 | 57.93 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 13 | 7 |
| 295 | 57.95 | humidity | 70.0 | 14400 | > th | dose dependent | rect. | 13 | 6 |
| 320 | 58.05 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 19 | 1 |
| 357 | 58.12 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 19 | 1 |
| 361 | 58.13 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 9 | 14 |
| 387 | 58.17 | wind | 3.0 | 43200 | < th | dose independent | rect. | 3 | 10 |
| 399 | 58.19 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 3 | 6 |
| 403 | 58.20 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 15 | 2 |
| 417 | 58.23 | humidity | 70.0 | 14400 | > th | dose dependent | rect. | 10 | 6 |
| 458 | 58.28 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 14 | 5 |
| 465 | 58.30 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 3 | 9 |
| 478 | 58.31 | humidity | 80.0 | 14400 | > th | dose independent | sin | 22 | NA |
| 484 | 58.32 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 9 | 3 |
| 499 | 58.34 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 533 | 58.40 | precipitation | 0.1 | 4320 | < th | dose independent | sin | 3 | NA |
| 536 | 58.40 | precipitation | 0.1 | 4320 | < th | dose dependent | sin | 3 | NA |
| 541 | 58.41 | precipitation | 0.1 | 4320 | > th | dose independent | sin | 3 | NA |
| 547 | 58.41 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 15 | 11 |
| 559 | 58.43 | humidity | 80.0 | 14400 | > th | dose dependent | sin | 20 | NA |
| 566 | 58.44 | wind | 1.0 | 43200 | < th | dose independent | rect. | 1 | 1 |
| 581 | 58.46 | wind | 3.0 | 43200 | > th | dose independent | rect. | 3 | 10 |
| 586 | 58.46 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 24 | 8 |
| 612 | 58.50 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 5 | 2 |
| 647 | 58.54 | humidity | 80.0 | 1440 | > th | dose dependent | rect. | 6 | 8 |
| 661 | 58.56 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 1 | 3 |
| 665 | 58.57 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 5 | 2 |
| 667 | 58.57 | humidity | 90.0 | 14400 | > th | dose dependent | sin | 16 | NA |
| 674 | 58.58 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 16 | 9 |
| 687 | 58.59 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 6 | 20 |
| 735 | 58.66 | humidity | 90.0 | 14400 | > th | dose independent | sin | 17 | NA |
| 780 | 58.71 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 5 | 2 |
| 783 | 58.71 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 13 | 12 |
| 786 | 58.71 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 5 | 2 |
| 805 | 58.72 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 3 | 19 |
| 807 | 58.73 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 922 | 58.83 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 6 | 4 |
| 932 | 58.84 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 13 | 7 |
| 959 | 58.85 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 960 | 58.85 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 967 | 58.85 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 6 | 20 |
| 968 | 58.85 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 16 | 1 |
| 977 | 58.86 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 13 | 7 |
| 979 | 58.86 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 13 | 7 |
| 985 | 58.87 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 13 | 7 |
| 997 | 58.88 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 1 | 21 |
| 1000 | 58.89 | humidity | 80.0 | 14400 | < th | dose independent | sin | 21 | NA |