BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0164600 Os01g0164600|AK099645
(331 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os01g0164600 Protein phosphatase 2C-like domain containing ... 533 e-152
Os03g0809300 Protein phosphatase 2C-like domain containing ... 105 4e-23
Os10g0370000 Protein phosphatase 2C-like domain containing ... 100 1e-21
Os03g0192500 Protein phosphatase 2C-like domain containing ... 91 1e-18
AK072473 90 2e-18
Os02g0633900 76 4e-14
Os02g0633700 74 1e-13
>Os01g0164600 Protein phosphatase 2C-like domain containing protein
Length = 331
Score = 533 bits (1372), Expect = e-152, Method: Compositional matrix adjust.
Identities = 272/331 (82%), Positives = 272/331 (82%)
Query: 1 MAASSTATRLSPPRLHAPTTXXXXXXXXXXXXXXXXAAKLEAVLTIGTHLIPHPRKAETG 60
MAASSTATRLSPPRLHAPTT AAKLEAVLTIGTHLIPHPRKAETG
Sbjct: 1 MAASSTATRLSPPRLHAPTTPSPHLPLRRSRFSPLRAAKLEAVLTIGTHLIPHPRKAETG 60
Query: 61 GEXXXXXXXXXXXXXXXXXXXSGWAEKDVNPALFSRELMAHTSTFLKDEEVNHDPQLLLM 120
GE SGWAEKDVNPALFSRELMAHTSTFLKDEEVNHDPQLLLM
Sbjct: 61 GEDAFFVNGDDGGVFAVADGVSGWAEKDVNPALFSRELMAHTSTFLKDEEVNHDPQLLLM 120
Query: 121 KAHAATTSVGSATVIIAMLEKTGILKIASVGDCGLKVIRKGQVMFSTCPQEHYFDCPYQL 180
KAHAATTSVGSATVIIAMLEKTGILKIASVGDCGLKVIRKGQVMFSTCPQEHYFDCPYQL
Sbjct: 121 KAHAATTSVGSATVIIAMLEKTGILKIASVGDCGLKVIRKGQVMFSTCPQEHYFDCPYQL 180
Query: 181 SSEAIGQTYLDALVCTVNLMEGDMIVSGSDGFFDNIFDQEIVSVISESPGVDXXXXXXXX 240
SSEAIGQTYLDALVCTVNLMEGDMIVSGSDGFFDNIFDQEIVSVISESPGVD
Sbjct: 181 SSEAIGQTYLDALVCTVNLMEGDMIVSGSDGFFDNIFDQEIVSVISESPGVDEAAKALAE 240
Query: 241 XXXXHSVDVTFDSPYSMEARSRGFDVPSWXXXXXXXXXXXXMDDITVIVAQVKAVMIPDD 300
HSVDVTFDSPYSMEARSRGFDVPSW MDDITVIVAQVKAVMIPDD
Sbjct: 241 LARKHSVDVTFDSPYSMEARSRGFDVPSWKKFIGGKLIGGKMDDITVIVAQVKAVMIPDD 300
Query: 301 EGVDEEKGQGDEQGSAVAVASSEQKEDSITT 331
EGVDEEKGQGDEQGSAVAVASSEQKEDSITT
Sbjct: 301 EGVDEEKGQGDEQGSAVAVASSEQKEDSITT 331
>Os03g0809300 Protein phosphatase 2C-like domain containing protein
Length = 479
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 123/254 (48%), Gaps = 18/254 (7%)
Query: 44 LTIGTHLIPHPRKAETGGEXXXXXXXXXXXXXXXXXXXSGWAEKDVNPALFSRELMAHTS 103
L G+ +PHP K TGGE GWA+ V+ L+++ELM+++
Sbjct: 233 LVSGSCYLPHPAKEATGGEDGHFICVDEQAIGVADGV-GGWADHGVDAGLYAKELMSNSM 291
Query: 104 TFLKDE-EVNHDPQLLLMKAHAATTSVGSATVIIAMLEKTGILKIASVGDCGLKVIRKGQ 162
+ +KDE + DP +L KA+ T + GS+T I L++ GI + ++GD G ++R G+
Sbjct: 292 SAIKDEPQGTIDPSRVLEKAYTCTKARGSSTACIVALKEQGIHAV-NLGDSGFIIVRDGR 350
Query: 163 VMFSTCPQEHYFDCPYQLSSEAIGQTYLDALVCTVNLMEGDMIVSGSDGFFDNIFDQEIV 222
+ + Q+H F+ YQL S A + GD+I++G+DG FDN++ EI
Sbjct: 351 TVLRSPVQQHDFNFTYQLESGGGSDLPSSAQTFHFPVAPGDVIIAGTDGLFDNLYSNEIS 410
Query: 223 SVISES--PGV--DXXXXXXXXXXXXHSVDVTFDSPYSMEARSRGFDVPSWXXXXXXXXX 278
+++ E+ G+ + ++D SP++ A+ G+
Sbjct: 411 AIVVEALRTGLEPEATAKKIAALAQQKAMDRNRQSPFAAAAQEAGYRY-----------F 459
Query: 279 XXXMDDITVIVAQV 292
+DDITVIV+ V
Sbjct: 460 GGKLDDITVIVSYV 473
>Os10g0370000 Protein phosphatase 2C-like domain containing protein
Length = 465
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 99/192 (51%), Gaps = 15/192 (7%)
Query: 43 VLTIGTHLIPHPRKAETGGEXXXXXXXXXXXXXXXXXXXSGWAEKDVNPALFSRELMAHT 102
VL G ++PHP KA TGGE W+ + +N L++RELM
Sbjct: 220 VLASGAAILPHPSKAATGGEDAYFIACDGWFGVADGVGQ--WSFEGINAGLYARELMDGC 277
Query: 103 STFLKDEEVNHD--PQLLLMKAHAATTSVGSATVIIAMLEKTGILKIASVGDCGLKVIRK 160
F+ + + D P+ +L KA S GS+TV++A + L +++GD G VIR
Sbjct: 278 KKFIMENQGAADIKPEQVLSKAADEAHSPGSSTVLVAHFDGQ-FLNASNIGDSGFLVIRN 336
Query: 161 GQVMFSTCPQEHYFDCPYQLSSE----AIGQTYLDALVCTVNLMEGDMIVSGSDGFFDNI 216
G+V + P + F+ P Q+ + Q Y T+ L +GD+IV+ SDG FDN+
Sbjct: 337 GEVYQKSKPMVYGFNFPLQIEKGDNPLKLVQNY------TIELEDGDVIVTASDGLFDNV 390
Query: 217 FDQEIVSVISES 228
++QE+ +++S+S
Sbjct: 391 YEQEVATMVSKS 402
>Os03g0192500 Protein phosphatase 2C-like domain containing protein
Length = 569
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 96/194 (49%), Gaps = 19/194 (9%)
Query: 43 VLTIGTHLIPHPRKAETGGEXXXXXXXXXXXXXXXXXXXSGWAEKDVNPALFSRELMAHT 102
+L G ++PHP K TGGE W+ + +N L++RELM
Sbjct: 324 ILASGAAMLPHPSKVLTGGEDAYFIACDGWFGVADGVGQ--WSFEGINAGLYARELMDGC 381
Query: 103 STFLKDEEVNHDPQL----LLMKAHAATTSVGSATVIIAMLEKTGILKIASVGDCGLKVI 158
+ E P++ +L KA S GS+TV++A + +L ++GD G VI
Sbjct: 382 KKAVM--ESQGAPEMRTEEVLAKAADEARSPGSSTVLVAHFDGQ-VLHACNIGDSGFLVI 438
Query: 159 RKGQVMFSTCPQEHYFDCPYQLSSE----AIGQTYLDALVCTVNLMEGDMIVSGSDGFFD 214
R G++ + P + F+ P Q+ + Q Y T++L EGD IV+ +DG FD
Sbjct: 439 RNGEIYQKSKPMTYGFNFPLQIEKGDDPFKLVQKY------TIDLQEGDAIVTATDGLFD 492
Query: 215 NIFDQEIVSVISES 228
N++++EI +VIS+S
Sbjct: 493 NVYEEEIAAVISKS 506
>AK072473
Length = 781
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 96/194 (49%), Gaps = 19/194 (9%)
Query: 43 VLTIGTHLIPHPRKAETGGEXXXXXXXXXXXXXXXXXXXSGWAEKDVNPALFSRELMAHT 102
+L G ++PHP K TGGE W+ + +N L++RELM
Sbjct: 322 ILASGAAMLPHPSKVLTGGEDAYFIACDGWFGVADGVGQ--WSFEGINAGLYARELMDGC 379
Query: 103 STFLKDEEVNHDPQL----LLMKAHAATTSVGSATVIIAMLEKTGILKIASVGDCGLKVI 158
+ E P++ +L KA S GS+TV++A + +L ++GD G VI
Sbjct: 380 KKAVM--ERQGAPEMRTEEVLAKAADEARSPGSSTVLVAHFDGQ-VLHACNIGDSGFLVI 436
Query: 159 RKGQVMFSTCPQEHYFDCPYQLSSE----AIGQTYLDALVCTVNLMEGDMIVSGSDGFFD 214
R G++ + P + F+ P Q+ + Q Y T++L EGD IV+ +DG FD
Sbjct: 437 RNGEIYQKSKPMTYGFNFPLQIEKGDDPFKLVQKY------TIDLQEGDAIVTATDGLFD 490
Query: 215 NIFDQEIVSVISES 228
N++++EI +VIS+S
Sbjct: 491 NVYEEEIAAVISKS 504
>Os02g0633900
Length = 315
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 100/222 (45%), Gaps = 25/222 (11%)
Query: 83 GWAEKDVNPALFSRELMAHTSTFLKDEEVNHD----PQLLLMKAH----AATTSVGSATV 134
G+ V+ A F+R LM + + P LL A+ +A T S V
Sbjct: 106 GYRAPGVDAAAFARALMYNAFEMVVATTPGGAGGICPYALLGWAYEQAVSARTQGASTAV 165
Query: 135 IIAMLEKTGILKIASVGDCGLKVIRKGQVMFSTCPQEHYFDCPYQLSSEAIGQTYLDALV 194
I+++ T LK A +GD V R G++ F + Q H F+ P+QLS + G + A
Sbjct: 166 ILSLAGAT--LKYAYIGDSAFAVFRDGKLFFRSEAQVHSFNYPFQLSVKN-GNSVTSAAR 222
Query: 195 CTVNLMEGDMIVSGSDGFFDNIFDQEIVSVIS--ESPGVDXXXXXXXXXXXXHSVDVTF- 251
V + EGD++V+G+DG FDN+ +E+ +++ + G+ + T
Sbjct: 223 GGVEVKEGDVVVAGTDGLFDNVTSEELQRIVAMGRALGLSPKQTADVVAGFAYEASTTMG 282
Query: 252 -DSPYSMEARSRGFDVPSWXXXXXXXXXXXXMDDITVIVAQV 292
D+P+S+E+R + DDITV+VA +
Sbjct: 283 RDTPFSLESRKK----------QGTIFRRGKRDDITVVVAYI 314
>Os02g0633700
Length = 319
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 93/211 (44%), Gaps = 16/211 (7%)
Query: 89 VNPALFSRELMAHTSTFLKDEEVNHD--PQLLLMKAHAATT---SVGSATVIIAMLEKTG 143
V+ FSR LM L E P LL +A+ T + G +T +I L
Sbjct: 109 VDAGAFSRGLMTSAFAQLVTAEPGTPVCPYTLLERAYEETLESGAQGGSTAVILSLADGN 168
Query: 144 ILKIASVGDCGLKVIRKGQVMFSTCPQEHYFDCPYQLSSEAIGQTYLDALVCTVNLMEGD 203
+L+ A +GD V+R G+V+ + Q+ YF+ PY L + +V + + GD
Sbjct: 169 VLRWAYIGDSAFAVLRDGRVVVRSVQQQRYFNAPYYLGGRRGDEGMTVGMVGEMKVRRGD 228
Query: 204 MIVSGSDGFFDNIFDQEIVSVISESPGVDXXXXXXXXXXXXHSVDVTF----DSPYSMEA 259
++V+G+DG FDN+ D E+ V+ + + +++ DSP+++E
Sbjct: 229 VVVAGTDGLFDNMSDAELEKVVQIGTALGFSPKNMADIIGGTAYEMSRCLLKDSPFAVEW 288
Query: 260 RSRGFDVPSWXXXXXXXXXXXXMDDITVIVA 290
R + +DDITV+VA
Sbjct: 289 RKQ-------HENEEGHFYGGKVDDITVVVA 312
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.314 0.130 0.371
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 8,952,008
Number of extensions: 290722
Number of successful extensions: 607
Number of sequences better than 1.0e-10: 7
Number of HSP's gapped: 594
Number of HSP's successfully gapped: 7
Length of query: 331
Length of database: 17,035,801
Length adjustment: 101
Effective length of query: 230
Effective length of database: 11,762,187
Effective search space: 2705303010
Effective search space used: 2705303010
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 156 (64.7 bits)