BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os12g0492900 Os12g0492900|AK106832
(423 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os12g0492900 Cyclin-like F-box domain containing protein 760 0.0
Os12g0493200 195 5e-50
Os12g0493800 163 2e-40
Os08g0493200 162 5e-40
Os08g0492900 154 2e-37
Os12g0494500 147 2e-35
Os08g0493100 Cyclin-like F-box domain containing protein 145 6e-35
Os12g0493100 135 6e-32
Os08g0493450 115 4e-26
Os12g0493400 99 6e-21
Os09g0479100 Cyclin-like F-box domain containing protein 72 6e-13
>Os12g0492900 Cyclin-like F-box domain containing protein
Length = 423
Score = 760 bits (1962), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/423 (91%), Positives = 386/423 (91%)
Query: 1 MAAVDDDRWEDLPTDLLTEILLCLPPISGXXXXXXXXXXXXDAVDELEPETTHSRAKPLT 60
MAAVDDDRWEDLPTDLLTEILLCLPPISG DAVDELEPETTHSRAKPLT
Sbjct: 1 MAAVDDDRWEDLPTDLLTEILLCLPPISGRRRVRLVCSRWRDAVDELEPETTHSRAKPLT 60
Query: 61 FLKRSVDSGRPATARVFDDLAGGGLGGSREIWNXXXXXXXXXXXXXXXXXTCNGLLCLWH 120
FLKRSVDSGRPATARVFDDLAGGGLGGSREIWN TCNGLLCLWH
Sbjct: 61 FLKRSVDSGRPATARVFDDLAGGGLGGSREIWNGGGGGDGVSGSSPDIVGTCNGLLCLWH 120
Query: 121 CGSDSGGEITLVNPVTGESLAIXXXXXXXXRWRSHTTEGPEAERLSFAYHPLTGRYSIVH 180
CGSDSGGEITLVNPVTGESLAI RWRSHTTEGPEAERLSFAYHPLTGRYSIVH
Sbjct: 121 CGSDSGGEITLVNPVTGESLAIPPPPPPSPRWRSHTTEGPEAERLSFAYHPLTGRYSIVH 180
Query: 181 FPAAFCDGGGDNLADPAVEVLTLGGAGASASWREVAAPPGSRCCLALGIVSVDGATYWVT 240
FPAAFCDGGGDNLADPAVEVLTLGGAGASASWREVAAPPGSRCCLALGIVSVDGATYWVT
Sbjct: 181 FPAAFCDGGGDNLADPAVEVLTLGGAGASASWREVAAPPGSRCCLALGIVSVDGATYWVT 240
Query: 241 KDGRIMSLDHEHERVTAVLPLPPAIAGELDSWWSTRLTEVAGRLGVAITSNHTTPSKYNV 300
KDGRIMSLDHEHERVTAVLPLPPAIAGELDSWWSTRLTEVAGRLGVAITSNHTTPSKYNV
Sbjct: 241 KDGRIMSLDHEHERVTAVLPLPPAIAGELDSWWSTRLTEVAGRLGVAITSNHTTPSKYNV 300
Query: 301 EVWVLDGARGKMTWSHRYTIQDLQFSYQEIAWPHFAYGENVLTILDSDHLRNQLYTHWLW 360
EVWVLDGARGKMTWSHRYTIQDLQFSYQEIAWPHFAYGENVLTILDSDHLRNQLYTHWLW
Sbjct: 301 EVWVLDGARGKMTWSHRYTIQDLQFSYQEIAWPHFAYGENVLTILDSDHLRNQLYTHWLW 360
Query: 361 PHKNRTSVATGDVVKGTLVEEFVIDPENVKILSLIDPEIHVNMFSYVETNEPLNIYKEVC 420
PHKNRTSVATGDVVKGTLVEEFVIDPENVKILSLIDPEIHVNMFSYVETNEPLNIYKEVC
Sbjct: 361 PHKNRTSVATGDVVKGTLVEEFVIDPENVKILSLIDPEIHVNMFSYVETNEPLNIYKEVC 420
Query: 421 MDS 423
MDS
Sbjct: 421 MDS 423
>Os12g0493200
Length = 423
Score = 195 bits (496), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 156/397 (39%), Positives = 192/397 (48%), Gaps = 79/397 (19%)
Query: 8 RWEDLPTDLLTEILLCLPPISGXXXXXXXXXXXXDAVDELEPETTHSRAKPLTFLKRSVD 67
RW D+PTD+L EIL LP I+G D VDE+EPE RAKPL F K
Sbjct: 6 RWGDVPTDVLWEILRRLPQITGRRWR--------DVVDEIEPEVQRRRAKPLAFFKNGCY 57
Query: 68 SGRPATARVFDDLAGG--------------GLGGSREIWNXXXXXXXXXXXXXXXXXTCN 113
P +A D+AG GG R+ + +CN
Sbjct: 58 E--PPSAFSLHDIAGDCDVTSLFREEKQEDNDGGDRDFF--------ARYNNDDMVGSCN 107
Query: 114 GLLCLWHCGSDSGG-EITLVNPVTGESLAIXXXXXXXXRWRSHT-TEGPEAERLSFAYHP 171
GL+CLW S SGG I + NPVTGE+L I SH T GP L F YHP
Sbjct: 108 GLICLWLDRSYSGGCGIFVTNPVTGETLHIPSPPLETMATSSHRRTAGP----LCFGYHP 163
Query: 172 LTGRYSIVHFPAAFCDGGGDNLA--------------------DPAVEVLTLGGAGASAS 211
TG+Y IVHFP+ G D++ V VLTLG +AS
Sbjct: 164 TTGKYKIVHFPSN--GGRVDDVTLGGTTSAAAAAAASSFPSRHGGVVNVLTLGDG--AAS 219
Query: 212 WREVAAPPGSRCCLALGIVSVDGATYWVTKDGRIMSLDHEHERVTAVLPLP-------PA 264
WR V PP S C+A G+VSVDGATYWV + IMS D EHERV AV PLP P
Sbjct: 220 WRAVGVPPWS-LCIAWGVVSVDGATYWVAEGREIMSFDLEHERVAAVAPLPAMSRCRLPV 278
Query: 265 IAGELDSWWSTRLTEVAGRLGVAITSNHTTPSKYNVEVWVLDGARGKMTWSHRYTIQDLQ 324
+ D+ +LT+V GRLGV+I + + +EVW+L+G GK WS TIQ LQ
Sbjct: 279 SMAKEDA--CCQLTDVGGRLGVSIAIHQR--NSICIEVWLLEGRGGKQKWSKWRTIQGLQ 334
Query: 325 FSYQEIAWPHFAYGENVLTILDSDH----LRNQLYTH 357
+ Q+I P+FAYG VLT + + L N +Y H
Sbjct: 335 PT-QKIGRPYFAYGNCVLTNIYREMFDQGLNNIVYRH 370
>Os12g0493800
Length = 312
Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 130/313 (41%), Positives = 153/313 (48%), Gaps = 25/313 (7%)
Query: 4 VDDDRWEDLPTDLLTEILLCLPPISGXXXXXXXXXXXXDAVDELEPETTHSRAKPLTF-L 62
+D + LPTD EILL LPP S D VD PE RAK L F L
Sbjct: 1 MDGSILDGLPTDAFVEILLRLPP-SARRRSRLVCRRWRDVVDARTPEGQSRRAKALVFFL 59
Query: 63 KRSVDSGRP-ATARVFDDLAG-GGLGGSREIWNXXXXXXXXXXXXXXXXXTCNGLLCLWH 120
R S P +A VFDDL+ GG REIWN CNG++ LW
Sbjct: 60 NRGSHSPEPRCSAHVFDDLSPPSSSGGGREIWNSGTGTAAELAMVG----CCNGVIALWE 115
Query: 121 CGSDSGGEITLVNPVTGESLAIXXXXXXXXRWRSHTTEGPEAERLSFAYHPLTGRYSIVH 180
G+ G +TLVNP TGE+LA+ + R LSF YHP+TGRY IVH
Sbjct: 116 EGT---GRLTLVNPSTGETLAVPPPPRLPPKRRHRRAP-LVVSCLSFGYHPITGRYKIVH 171
Query: 181 FPAAFCDGGGDNL--ADP--AVEVLTLGG---AGASASWREVAAPPGSRCCLALGIVSVD 233
PA + P VEV TLG AG A+W+EVAAPPGS C + LG+ S+D
Sbjct: 172 LPADDAMAAASSSSWCSPFDVVEVFTLGDVGVAGDGATWQEVAAPPGSSCHVRLGVFSLD 231
Query: 234 GATYWVTKDGRIMSLDHEHERVTAV-LPLPPAIAGELDSWWSTRLTEVAGRLGVAITS-N 291
GA YWV D +MS D EHERV AV PLP G W L V GRLGVA+
Sbjct: 232 GAAYWVAADNAVMSFDLEHERVAAVEAPLPAMPLGT----WLGALAVVGGRLGVAVMGCA 287
Query: 292 HTTPSKYNVEVWV 304
+ P+ VEV +
Sbjct: 288 DSYPTTTIVEVQI 300
>Os08g0493200
Length = 384
Score = 162 bits (410), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 150/419 (35%), Positives = 199/419 (47%), Gaps = 61/419 (14%)
Query: 12 LPTDLLTEILLCLPPISGXXXXXXXXXXXXDAVDELEPETTHSRAKPLTFLKRSVDSGRP 71
+P+D + EIL+ LPP S D VD+ PE SRAK L +
Sbjct: 9 IPSDAVVEILVRLPP-SSRRRCRLVCRHWRDLVDDRTPE-MRSRAKALVLVH-------- 58
Query: 72 ATARVFDDLAGGGLGGSREIWNXXXXXXXXXXXXXXXXXTCNGL--LCLWHCGSDSGGEI 129
A A VFDDL G R++ TCNGL LC W G
Sbjct: 59 AVAHVFDDLPE---GRRRQLL--------PNCRGVDIVGTCNGLVFLCEWSRG------F 101
Query: 130 TLVNPVTGESL-AIXXXXXXXXRWRSHTTEGPEAERLSFAYHPLTGRYSIVHFPAAFCDG 188
LVNP TGE + R P +F YHP TGRY IVHFP D
Sbjct: 102 ALVNPFTGERVDGAGVPPPPCPRGEEPPFYQPTHAAYAFGYHPTTGRYKIVHFPIQ--DR 159
Query: 189 GGDNLADPAVEVLTLGG-AGASASWREVAAPP-GSRCCLALGIVSVDGATYWVTKDG-RI 245
+ AV VLTLG AS SWR+V P GS + G+VSVDG+TYW+T+D R+
Sbjct: 160 RTETFD--AVRVLTLGAEEDASTSWRDVPMPAGGSSRRGSCGVVSVDGSTYWITRDTERV 217
Query: 246 MSLD-HEHERVTAVLPLPPAIAGELDSWWSTRLTEVAGRLGVAITSNHTTPSKYNVEVWV 304
MSLD + ERV AV PL PA + +LT+V GRLGVA++ + T + + +VWV
Sbjct: 218 MSLDLGDDERVAAVTPLLPARTA--GPGCTCKLTDVRGRLGVAVSVSMATST--DTDVWV 273
Query: 305 LD---GARGKMTWSHRYTIQDLQFSYQEIAWPHFAYGENVLTILDSDHLRNQLYTHWLWP 361
L+ G G+ WS RY+++ + Q++AWPHFA+GE+VLT +R LY H L
Sbjct: 274 LEGGGGGGGERRWSRRYSVR-VHGVEQQLAWPHFAHGEHVLTTSTHCSIRGFLYAHRLSD 332
Query: 362 HKNR----TSVATGDVVKGTLVEEFVIDPENVKILSLIDPEIHVNMFSYVETNEPLNIY 416
R ++V + G +V F + F+YVET EP++++
Sbjct: 333 DGRRRLQCSAVRINERRPGKVVGSFGACYRR-----------DLRTFAYVETTEPVSVF 380
>Os08g0492900
Length = 388
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 138/414 (33%), Positives = 193/414 (46%), Gaps = 48/414 (11%)
Query: 11 DLPTDLLTEILLCLPPISGXXXXXXXXXXXXDAVDELEPETTHSRAKPLTFLKRSVDSGR 70
D PTD+L +IL LP S D +D+ PE R K LTF+K +D+
Sbjct: 16 DFPTDVLVDILSQLP-TSSRRLCRLVCRRWRDTIDKRTPER-DVRTKMLTFVK-GLDNE- 71
Query: 71 PATARVFDDLAGGGLGGSREIWNXXXXXXXXXXXXXXXXXTCNGLLCLWHCGSDSGGEIT 130
A+A V D+ G R +W T NGL+C+ G+ G +T
Sbjct: 72 -ASAYVVDE----ARGRHRRVWTSSCSVDVIG--------TRNGLICVLDGGT---GAVT 115
Query: 131 LVNPVTGESLAIXXXXXXXXRWRSHTTEGPEAERLSFAYHPLTGRYSIVHFPAAFCDGGG 190
+ NP T ESL++ + E FA+HP T RY++VH P F G
Sbjct: 116 VANPATRESLSVPPPPPRQAGLLPCFPDARTHEAYGFAFHPATLRYAVVHVPCYFNKSGT 175
Query: 191 DNLADPAVEVLTLG--GAGASASWREVAAPPGSRCCLALGIVSVDGATYWVTK--DGRIM 246
+ AV+V TLG G GA SWR V P S G+ VDG YW+T IM
Sbjct: 176 FD----AVQVYTLGRGGRGAPPSWRSVPTPGASGRFQPGGVACVDGVAYWITAGTPAAIM 231
Query: 247 SLDHEHERVTAVL--PLPPAIAGELDSWWSTRLTEVAGRLGVAITSNHTTPSKYNVEVWV 304
SLD + RV V P P S RLTE+ GRL VA+T T VEVW
Sbjct: 232 SLDLKDNRVAPVKWSPETPGRGCRC----SYRLTEMRGRLCVAVTVEETEKPTKRVEVWW 287
Query: 305 LDGARGKMTWSHRYTIQDLQFSYQEIAWPHFAYGENVLTILDSDHLRNQLYTHWLWPHKN 364
++ R + W+ RY I L+ Q + WP FA+GENVLT+ Q++ + HK+
Sbjct: 288 MESTRDQR-WTRRYNIM-LETPKQHVMWPLFAHGENVLTVA-------QVFKEYNL-HKH 337
Query: 365 RTSVATGDVVKGTLVEEFVIDPENVKILSL-IDPEIHVNMFSYVETNEPLNIYK 417
+ S + ++V+ + P V+I++ + ++ F+Y+ET+EPL IYK
Sbjct: 338 KVSDKRSS--QCSMVKIWKKKP-GVEIMNYGVADHTGISTFAYMETSEPLEIYK 388
>Os12g0494500
Length = 421
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 137/444 (30%), Positives = 195/444 (43%), Gaps = 87/444 (19%)
Query: 13 PTDLLTEILLCLPPISGXXXXXXXXXXXXDAVDELEPETTHSRAKPLTFLKRSVDSGRP- 71
PTDL + +++ + D +DE P H+RAKPL F R + +P
Sbjct: 23 PTDLGSCLIMPRSSCASRHRFRLVCRRWRDLLDERTPRI-HARAKPLAFFTRGRHAAQPG 81
Query: 72 ATARVFDDLAGGGLGGSREIWNXXXXXXXXXXXXXXXXXTCNGLLCLWHCGSDSGGEITL 131
++A V+DD G R++W NG+L + + G+ITL
Sbjct: 82 SSAYVYDDDLSGEFVCCRQVWCGGAAVAAGLIMFGCR----NGILAML---DERTGDITL 134
Query: 132 VNPVTGESLAIXXXXXXXXRWRSHTTEGPEAERLSFAYHPLTGRYSIVHFPAAFCDGGGD 191
NP TGE+LA+ H T + F YHP TGRY +VH P G+
Sbjct: 135 ANPATGETLAVPPPPRLPRNCAFHRTA------VGFGYHPTTGRYKVVHLPVR-----GE 183
Query: 192 NLADPAVEVLTLGGAGASASWREV-AAPP--GSRCCLALGIVSVDGATYWVTKDG---RI 245
A VEV TL G++A+WREV AAPP GS C + G+VSVDGA YW+ G I
Sbjct: 184 ASAFGVVEVFTL--RGSNATWREVVAAPPPAGSSCDVDCGLVSVDGAMYWIAMGGGAAAI 241
Query: 246 MSLDHEHERVTAVLPLPPA----------------IAGELDSWWST-------------- 275
MS D EHERV V LP I G L +
Sbjct: 242 MSFDLEHERVAHVTSLPAMARRKLAAGRCCHLTGDIVGALMVHYGVVVAQAPTAPTLSPP 301
Query: 276 RLTEVAGRLGVAITSNHTTPSKYN---VEVWVLDGARGKMTWSHRYTIQDLQFSYQEIAW 332
LT + RL VAIT++ T + + VEVWVL R K W ++Y + + ++++
Sbjct: 302 LLTVIQRRLAVAITASDVTVIETDTPTVEVWVLHKGRRKQRWINQYRVVGMDTYHKQLTR 361
Query: 333 PH--FAYGENVLTILDSDHLRNQLYTHWLWPHKNRTSVATGDVVKGTLVEEFVIDPENVK 390
P+ F++GE+ + I W +P+ S+ + KG D E K
Sbjct: 362 PYFFFSHGEHYMIIT------------WRFPY---ISMRAHRLKKG--------DGEP-K 397
Query: 391 ILSLIDPEIHVNMFSYVETNEPLN 414
++L++ + +FSYVET E L
Sbjct: 398 EMALLEQGTSIQVFSYVETTETLR 421
>Os08g0493100 Cyclin-like F-box domain containing protein
Length = 449
Score = 145 bits (366), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 132/414 (31%), Positives = 174/414 (42%), Gaps = 38/414 (9%)
Query: 11 DLPTDLLTEILLCLPPISGXXXXXXXXXXXXDAVDELEPETTHSRAKPLTFLKRSVDSGR 70
DL TD EIL + P S + ++ P AK L F+ G
Sbjct: 10 DLHTDAFVEILRRVAP-SARRRLRLVCRRWRNVINSRAP-VWRGHAKTLAFVYHR--PGP 65
Query: 71 PATARVFDDLAGGGLGGSREIWNXXXXXXX-XXXXXXXXXXTCNGLLCLWHCGSDSGGEI 129
A D L G R++W+ +CNGLLCL+ G G+I
Sbjct: 66 ATAAYAIDGLEEDDEGCYRKLWDAAADPSLPAIYSRLRMIGSCNGLLCLYDEGVT--GDI 123
Query: 130 TLVNPVTGESLAIXXXXXXXXRWRSHTTEGPEAERLSFAYHPLTGRYSIVHFPAAFCDGG 189
L+NPVTGE+L + R + P E SF YH T RY IVH A DG
Sbjct: 124 ALLNPVTGETLDVAGPPGHRLRRQEPYGHVPYGEAFSFTYHEATERYKIVHL--AVSDGR 181
Query: 190 GDNLADPAVEVLTLGGAGASASWREVAAPPGSRCCLALGIVSVDGATYWVTKDG--RIMS 247
+ AVEVLTL S SWR VAAP GS C L G+VS ATYW+ G R+MS
Sbjct: 182 LE-----AVEVLTLVDGAPSPSWRRVAAPAGSSCWLPAGVVSDGQATYWINHGGGDRLMS 236
Query: 248 LDHEHERVTAVLPLPPAIAGELDSWWSTRLTEVAGRLGVAITSNHTTPSKYNV-EVWVL- 305
D ERV + LP A A L++ L + GRL V +H + + E+W+L
Sbjct: 237 FDLTDERVATITSLPVA-AKNLNAGC---LRKARGRLCVGNRIHHDYQNNTEIDEMWLLE 292
Query: 306 -DGARGKMTWSHR-YTIQDLQFSYQEIAWPHFAYGENVLTILDSDHLRNQLYTHWLWPHK 363
DG W R Y L Q++ PHF GE++L H LY H
Sbjct: 293 RDGCESLERWYCRFYLTTRLCMEVQQVVGPHFTQGEHILA-----HRHGSLYVHRCVSSA 347
Query: 364 NRTSVATGDVVKGTLVEEFVIDPENVKILSLIDPEIHVNMFSYVETNEPLNIYK 417
R + + + E + + ++ FSY+ET EPLN+Y+
Sbjct: 348 TRPQCSVAQIHEHWPYHEPMFTCGHAS---------NIRAFSYIETTEPLNVYQ 392
>Os12g0493100
Length = 261
Score = 135 bits (340), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 104/272 (38%), Positives = 127/272 (46%), Gaps = 32/272 (11%)
Query: 5 DDDRWEDLPTDLLTEILLCLPPISGXXXXXXXXXXXXDAVDELEPETTHS------RAKP 58
DDDRW + D+ EIL LPPISG D VDE+EPE RAKP
Sbjct: 4 DDDRWGHVHRDIFGEILKRLPPISGRRRIRLVCRRWRDGVDEMEPEMATPTTATTMRAKP 63
Query: 59 LTFLKRSVDSGRPATARVFDDLAGGGLGGSREIWNXXXXXXXXXXXXX-----------X 107
L LK R +A V D L +R I+
Sbjct: 64 LAVLKDR--HSRTLSAFVVDGLPPAPRCTTRCIFQHVDGGGGGHHHRHRYDRWPNNVGDQ 121
Query: 108 XXXTCNGLLCLWHCGSDSGGEITLVNPVTGESLAIXXXXXXXXRWRSHTTEGPEAERLSF 167
TCNG++ L H + L+N TGE L + ++ G A LSF
Sbjct: 122 VVGTCNGIVLLAHSRYVGSHTLVLLNRATGERLVVQPPP------KAKEILGGSAA-LSF 174
Query: 168 AYHPLTGRYSIVHFPAAFCDGGGDNLADPAVEVLTLG-GAGASASWREVAAPPGSRCCLA 226
YHPLTG Y +VH P + LA E+LT+G G G +ASWR+V AP GS C L+
Sbjct: 175 PYHPLTGEYKVVHLPVSSWK---RTLA--VAELLTVGDGDGGAASWRQVPAPAGSTCYLS 229
Query: 227 LGIVSVDGATYWVTKDGRIMSLDHEHERVTAV 258
G+VSVDGATYWV K G+IMSLD EHE + V
Sbjct: 230 WGVVSVDGATYWVGKGGKIMSLDLEHEIIAEV 261
>Os08g0493450
Length = 281
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 110/291 (37%), Positives = 134/291 (46%), Gaps = 37/291 (12%)
Query: 12 LPTDLLTEILLCLPPISGXXXXXXXXXXXXDAVDELEPETTHSRAKPLTFLKRSVDSGRP 71
+P+D L EIL LPP+ DAVD P +R P L + +G
Sbjct: 14 MPSDTLGEILRHLPPLD-RRRSRLVCRQWRDAVDSRAP----ARPGPAKTLVVAHGAGY- 67
Query: 72 ATARVFDDLAGGGLGGSREIWNXXXXXXXXXXXXXXXXXTCNGLLCL-WHCGSDSGGEIT 130
VFDD+ GG SREI TCNGLLC+ + G
Sbjct: 68 ----VFDDVPGGS---SREI--------PSPCPLANIVGTCNGLLCVVGTGAGFTTGGFV 112
Query: 131 LVNPVTGESLAIXXXXXXXXRWRSHTTEGPEAERLSFAYHPLTGRYSIVHFPAAFCDGGG 190
L NPVTGE+L + WR E SFA+HP TG Y IV FP G
Sbjct: 113 LSNPVTGEALHVPLPTRIGAPWRRWE----HNEYYSFAHHPTTGLYKIVPFPVDDRWTGS 168
Query: 191 DNLADPAVEVLTLGGAGASASWREVAAPPGSRCCLALGIVSVDGATYWVTKDG-RIMSLD 249
+ AV+V TLG A ASWR+V AP GS + G+VSVDG TYWV D ++MSLD
Sbjct: 169 FD----AVQVYTLGEA---ASWRDVPAPAGSSRRKSCGLVSVDGFTYWVAMDTEKVMSLD 221
Query: 250 HEHERVTAVLPLPPAIAGELDSWWSTRLTEVAGRLGVAITSNHTTPSKYNV 300
+ ER+T V+ LP A + RLTE GRL VA T +K V
Sbjct: 222 LKDERITVVITLP---APASEPGRQCRLTEAHGRLAVAAIVTQPTNTKTEV 269
>Os12g0493400
Length = 412
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 75/196 (38%), Positives = 90/196 (45%), Gaps = 32/196 (16%)
Query: 2 AAVDDDRWEDLP-TDLLTEILLCLPPISGXXXXXXXXXXXXDAVDELEPETTHSRAKPLT 60
A DDDRW D+ TD+L EIL LP ISG D VDE+EPE RAKPL
Sbjct: 20 ATDDDDRWGDVVLTDVLWEILRRLPQISGRRRLRLVCRRWRDVVDEVEPEVQRRRAKPLV 79
Query: 61 FLKRSVDSGR--PATARVFDDLAGGGLGGSREIWNXXXXXXXXXXXXXXXXX-------T 111
F K GR PA+A + D+AG S ++ +
Sbjct: 80 FFK----DGRYEPASAFLLHDVAGDCDVTSLSLFREEEEDDDGGDRDFFARYNNDDMVGS 135
Query: 112 CNGLLCLWHCGSD-SGGEITLVNPVTGESLAIXXXXXXXXRWRSHTTEGPEAER---LSF 167
CNGL+CLW G I ++NPVTGESL H P A R +SF
Sbjct: 136 CNGLICLWFDRDPLYYGSIVVINPVTGESL--------------HVPSLPTATRAGTISF 181
Query: 168 AYHPLTGRYSIVHFPA 183
YHP TG+Y IVHFP+
Sbjct: 182 GYHPTTGKYKIVHFPS 197
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/144 (36%), Positives = 72/144 (50%), Gaps = 26/144 (18%)
Query: 276 RLTEVAGRLGVAITSNHTTPSKYNVEVWVLDGARGKMTWSHRYTIQDLQFSYQEIAWPHF 335
+LT+V GRLGV+I + + +EVW+L+G R WS TIQ LQ Q+I P+F
Sbjct: 267 QLTDVGGRLGVSIAIHRR--NSIRIEVWILEGQR----WSQWRTIQGLQ-PNQKIGRPYF 319
Query: 336 AYGENVLTILDSDHLRNQL---YTHWLWPHKNRTSVATGDVVKGTLVEEFVIDPENVKIL 392
AYG+ VLT + R +L Y H P + ++GT V +F +
Sbjct: 320 AYGKFVLTNIYRKIFRERLNIGYQHL--PCSLKAGSILSRAIEGTPVAKFKTE------- 370
Query: 393 SLIDPEIHVNMFSYVETNEPLNIY 416
+ MFSY ET EPLNIY
Sbjct: 371 -------ELRMFSYTETGEPLNIY 387
>Os09g0479100 Cyclin-like F-box domain containing protein
Length = 503
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 89/349 (25%), Positives = 144/349 (41%), Gaps = 62/349 (17%)
Query: 12 LPTDLLTEILLCLPPISGXXXXXXXXXXXXDAVDELEPETTH-SRA--KPLTFLKRS--V 66
LP D++ ILL LP +S + + + H RA +PL F +R V
Sbjct: 20 LPQDIVELILLRLP-VSTLLRCRGVCKQWDGIIRDPQFAMVHIQRAPRRPLFFFQRENLV 78
Query: 67 DSGRPATARVFDDLAGGGLGGSREIWNXXXXXXXXXXXXXXXXXTCNGLLCLWHCGSDSG 126
P+ A +FD E W+ +CNGL+CL SD
Sbjct: 79 HLLYPSEAILFD-----------EAWSPSKWVVPVIEPDDFLCASCNGLICL---HSDKS 124
Query: 127 GEITLVNPVTGESLAIXXXXXXXXRWRSHTTEGPEAERLSFAYHPLTGRYSIVHFPAAFC 186
I + N TGE + + ++ SF +HP+T +Y ++HF
Sbjct: 125 T-IKIANLATGECMHLVKPV--------RNSKTDHFSYYSFGFHPVTKQYKVMHFLRDEH 175
Query: 187 DGGGDNLADPAVEVLTLGGAGASASWREVAAPPGS--RCCLALGIVSVDGATYWVTKDGR 244
G + + ++V TLG WR+V P RC G+V+V GA YW+T+D
Sbjct: 176 LHVGTSFS--IIQVYTLG----DEKWRDVRTPQALSLRCVERSGVVNVGGAMYWLTEDEE 229
Query: 245 ------IMSLDHEHERVTAVLPLP---PA--IAGELDSWWSTRLTEVAGRLGVAITSNHT 293
+++ D E + L LP PA + G+ D W +TEV + V+
Sbjct: 230 SVWKHAVVTFDLS-EELFQWLQLPAVDPANYVLGDPDQWL---ITEVDSNVSVSYYETG- 284
Query: 294 TPSKYNVEVWVLDGARGKMTWSHRYTIQDLQFSYQEIAWPHFAYGENVL 342
+ +W +D ++ + +WS +Y I + S E+ PH+ G+ ++
Sbjct: 285 -----KLHIWTID-SKIEQSWSQKYNI---RLSMLEVPGPHWICGDKII 324
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.318 0.136 0.433
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 15,712,907
Number of extensions: 681537
Number of successful extensions: 1932
Number of sequences better than 1.0e-10: 11
Number of HSP's gapped: 1880
Number of HSP's successfully gapped: 12
Length of query: 423
Length of database: 17,035,801
Length adjustment: 104
Effective length of query: 319
Effective length of database: 11,605,545
Effective search space: 3702168855
Effective search space used: 3702168855
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 157 (65.1 bits)