Os08g0493100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cyclin-like F-box domain containing protein.
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Os08g0493100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cyclin-like F-box domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 104.08 | 0.479 | 3 | -0.0256 | 0.0586 | 0.68 | 0.353 | 1.03 | 0.0281 | 14.1 | 1015 | 4745 | -- | -- |
| 104.82 | 0.477 | 2.98 | 0.0404 | 0.0573 | 0.403 | 0.363 | -- | 0.0457 | 14.3 | 1013 | 4740 | -- | -- |
| 104.51 | 0.476 | 3 | -0.00922 | 0.0652 | 0.737 | -- | 1.17 | 0.0266 | 15.8 | 1015 | 4754 | -- | -- |
| 105.26 | 0.478 | 2.98 | 0.0603 | 0.0668 | 0.386 | -- | -- | 0.0516 | 15.7 | 1013 | 4854 | -- | -- |
| 104.76 | 0.477 | 3 | -0.0209 | -- | 0.684 | -- | 1.05 | 0.027 | -- | 1015 | 4751 | -- | -- |
| 108.63 | 0.489 | 3 | -0.024 | 0.0651 | -- | 0.318 | -- | -0.00971 | 14.4 | -- | -- | -- | -- |
| 108.94 | 0.489 | 3 | -0.015 | 0.076 | -- | -- | -- | -0.00742 | 16.1 | -- | -- | -- | -- |
| 105.51 | 0.478 | 2.98 | 0.0511 | -- | 0.395 | -- | -- | 0.0487 | -- | 1013 | 4743 | -- | -- |
| 105.33 | 0.478 | 2.98 | -- | 0.0656 | 0.389 | -- | -- | 0.0427 | 15.8 | 1014 | 4731 | -- | -- |
| 109.25 | 0.488 | 3 | -0.0181 | -- | -- | -- | -- | -0.00945 | -- | -- | -- | -- | -- |
| 108.95 | 0.488 | 3 | -- | 0.0763 | -- | -- | -- | -0.00575 | 16.1 | -- | -- | -- | -- |
| 105.56 | 0.479 | 2.98 | -- | -- | 0.405 | -- | -- | 0.0405 | -- | 1014 | 4603 | -- | -- |
| 109.26 | 0.488 | 3 | -- | -- | -- | -- | -- | -0.00744 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 97.26 | wind | 7.0 | 90 | > th | dose independent | rect. | 18 | 1 |
| 2 | 97.50 | wind | 7.0 | 90 | > th | dose dependent | rect. | 18 | 2 |
| 4 | 97.69 | radiation | 1.0 | 90 | > th | dose dependent | rect. | 18 | 1 |
| 16 | 98.52 | precipitation | 0.1 | 30 | > th | dose independent | rect. | 4 | 4 |
| 30 | 98.52 | precipitation | 0.1 | 30 | > th | dose dependent | rect. | 5 | 9 |
| 61 | 98.53 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 4 | 3 |
| 62 | 98.53 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 5 | 3 |
| 88 | 98.54 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 5 | 1 |
| 91 | 98.54 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 5 | 1 |
| 109 | 98.55 | wind | 3.0 | 10 | > th | dose dependent | rect. | 6 | 1 |
| 115 | 98.58 | wind | 3.0 | 90 | > th | dose independent | rect. | 4 | 1 |
| 117 | 98.59 | wind | 3.0 | 10 | > th | dose independent | rect. | 6 | 1 |
| 180 | 100.43 | radiation | 1.0 | 10 | < th | dose independent | rect. | 6 | 1 |
| 182 | 100.44 | wind | 5.0 | 90 | > th | dose independent | rect. | 24 | 6 |
| 184 | 100.61 | wind | 5.0 | 10 | > th | dose independent | rect. | 20 | 1 |
| 195 | 100.83 | wind | 3.0 | 90 | > th | dose dependent | rect. | 24 | 6 |
| 216 | 101.12 | wind | 7.0 | 90 | > th | dose dependent | rect. | 23 | 2 |
| 220 | 101.19 | wind | 5.0 | 90 | > th | dose independent | rect. | 24 | 1 |
| 223 | 101.20 | wind | 7.0 | 90 | > th | dose independent | rect. | 24 | 4 |
| 225 | 101.21 | wind | 7.0 | 90 | > th | dose dependent | rect. | 24 | 4 |
| 246 | 101.29 | wind | 3.0 | 10 | > th | dose dependent | rect. | 1 | 3 |
| 251 | 101.31 | wind | 3.0 | 10 | > th | dose dependent | rect. | 1 | 1 |
| 252 | 101.32 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 22 | 1 |
| 257 | 101.32 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 22 | 1 |
| 265 | 101.36 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 13 | 7 |
| 284 | 101.54 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 12 | 8 |
| 333 | 101.95 | wind | 9.0 | 270 | > th | dose dependent | rect. | 17 | 6 |
| 355 | 102.01 | radiation | 1.0 | 90 | > th | dose independent | rect. | 18 | 1 |
| 386 | 102.06 | temperature | 25.0 | 270 | < th | dose independent | rect. | 12 | 7 |
| 401 | 102.23 | wind | 3.0 | 10 | > th | dose independent | rect. | 2 | 1 |
| 407 | 102.27 | wind | 9.0 | 270 | > th | dose independent | rect. | 16 | 7 |
| 414 | 102.29 | atmosphere | 1000.0 | 90 | < th | dose independent | rect. | 8 | 1 |
| 415 | 102.29 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 9 | 1 |
| 456 | 102.38 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 6 | 5 |
| 457 | 102.39 | atmosphere | 1000.0 | 270 | < th | dose independent | rect. | 6 | 1 |
| 502 | 102.50 | wind | 9.0 | 270 | > th | dose dependent | sin | 13 | NA |
| 531 | 102.62 | wind | 9.0 | 270 | > th | dose dependent | rect. | 14 | 9 |
| 537 | 102.63 | wind | 9.0 | 270 | > th | dose independent | rect. | 14 | 8 |
| 549 | 102.64 | wind | 9.0 | 270 | > th | dose independent | sin | 13 | NA |
| 604 | 102.68 | atmosphere | 1000.0 | 90 | < th | dose dependent | rect. | 9 | 1 |
| 628 | 102.72 | precipitation | 0.1 | 10 | < th | dose independent | sin | 1 | NA |
| 629 | 102.72 | precipitation | 0.1 | 10 | < th | dose dependent | sin | 1 | NA |
| 634 | 102.73 | atmosphere | 1005.0 | 90 | > th | dose dependent | rect. | 15 | 3 |
| 635 | 102.74 | precipitation | 0.1 | 10 | > th | dose independent | sin | 1 | NA |
| 638 | 102.74 | precipitation | 0.1 | 10 | > th | dose dependent | sin | 1 | NA |
| 697 | 102.91 | wind | 7.0 | 270 | > th | dose independent | rect. | 21 | 8 |
| 754 | 103.05 | wind | 7.0 | 90 | > th | dose independent | rect. | 21 | 4 |
| 764 | 103.05 | atmosphere | 1000.0 | 270 | < th | dose dependent | rect. | 6 | 1 |
| 809 | 103.10 | temperature | 25.0 | 270 | < th | dose independent | sin | 19 | NA |
| 853 | 103.17 | atmosphere | 1005.0 | 10 | > th | dose dependent | rect. | 16 | 2 |
| 893 | 103.29 | wind | 7.0 | 4320 | > th | dose dependent | rect. | 21 | 1 |
| 905 | 103.33 | temperature | 25.0 | 270 | > th | dose independent | rect. | 11 | 13 |
| 951 | 103.41 | wind | 7.0 | 1440 | < th | dose independent | rect. | 20 | 13 |
| 985 | 103.48 | temperature | 25.0 | 270 | > th | dose independent | sin | 19 | NA |
| 993 | 103.49 | wind | 7.0 | 30 | > th | dose independent | rect. | 16 | 6 |