BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os12g0264500 Os12g0264500|AK100907
(489 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os12g0264500 Similar to CoA-thioester hydrolase CHY1 (3-hyd... 976 0.0
Os10g0572700 Four-helical cytokine family protein 351 7e-97
Os10g0552900 Enoyl-CoA hydratase/isomerase domain containin... 306 2e-83
Os01g0752200 Enoyl-CoA hydratase/isomerase domain containin... 306 2e-83
Os10g0572800 Similar to CoA-thioester hydrolase CHY1 (3-hyd... 305 7e-83
Os06g0594100 Enoyl-CoA hydratase/isomerase domain containin... 180 2e-45
Os03g0310400 Enoyl-CoA hydratase/isomerase domain containin... 69 8e-12
>Os12g0264500 Similar to CoA-thioester hydrolase CHY1
(3-hydroxyisobutyryl-coenzyme A hydrolase)
Length = 489
Score = 976 bits (2522), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 477/489 (97%), Positives = 477/489 (97%)
Query: 1 TARFLLPRSPVSIEEVEAAPDANGGGEEANRPRVEGDGEGVLQSNESSAKVDEPVATENS 60
TARFLLPRSPVSIEEVEAAPDANGGGEEANRPRVEGDGEGVLQSNESSAKVDEPVATENS
Sbjct: 1 TARFLLPRSPVSIEEVEAAPDANGGGEEANRPRVEGDGEGVLQSNESSAKVDEPVATENS 60
Query: 61 DAAPAEASVDAVNGKIPPTKLIPQHPLEGVTLTERTVRITGNKKQIEAAKDIIKQAMSQV 120
DAAPAEASVDAVNGKIPPTKLIPQHPLEGVTLTERTVRITGNKKQIEAAKDIIKQAMSQV
Sbjct: 61 DAAPAEASVDAVNGKIPPTKLIPQHPLEGVTLTERTVRITGNKKQIEAAKDIIKQAMSQV 120
Query: 121 LVEANGVTRTLVLNRPKQLNALSSAMITCFLRCFTAYEEDDGVKLLIVKGKGRAFCAGGD 180
LVEANGVTRTLVLNRPKQLNALSSAMITCFLRCFTAYEEDDGVKLLIVKGKGRAFCAGGD
Sbjct: 121 LVEANGVTRTLVLNRPKQLNALSSAMITCFLRCFTAYEEDDGVKLLIVKGKGRAFCAGGD 180
Query: 181 VAAVVRSINNDSWKYGAHFFRNEFLLNYIIATYSKPQVSLLTGIVMGGGAGVSIHGRFRV 240
VAAVVRSINNDSWKYGAHFFRNEFLLNYIIATYSKPQVSLLTGIVMGGGAGVSIHGRFRV
Sbjct: 181 VAAVVRSINNDSWKYGAHFFRNEFLLNYIIATYSKPQVSLLTGIVMGGGAGVSIHGRFRV 240
Query: 241 VTDSTVFAMPETALGLFPDIGASYFLSRLLGFYGEYVGLTGVRLDAAEMLACGLATHFVP 300
VTDSTVFAMPETALGLFPDIGASYFLSRLLGFYGEYVGLTGVRLDAAEMLACGLATHFVP
Sbjct: 241 VTDSTVFAMPETALGLFPDIGASYFLSRLLGFYGEYVGLTGVRLDAAEMLACGLATHFVP 300
Query: 301 SDRLSLLEESLKKVDTSDPFAICGIIDQYSQQPSLKEKSALNRLEIINKCFSKKTVEEII 360
SDRLSLLEESLKKVDTSDPFAICGIIDQYSQQPSLKEKSALNRLEIINKCFSKKTVEEII
Sbjct: 301 SDRLSLLEESLKKVDTSDPFAICGIIDQYSQQPSLKEKSALNRLEIINKCFSKKTVEEII 360
Query: 361 ASLEQEAPNVADEWIASAIQSMRKASPTSMKISLRSIREGRTQTVGECLRREYRMVCHVM 420
ASLEQEAPNVADEWIASAIQSMRKASPTSMKISLRSIREGRTQTVGECLRREYRMVCHVM
Sbjct: 361 ASLEQEAPNVADEWIASAIQSMRKASPTSMKISLRSIREGRTQTVGECLRREYRMVCHVM 420
Query: 421 RGDFSRDFFEGCRAILLDRDRNPKWMPPRLEEVHDEVVEKYFSKVXXXXXXXXXXXXRRS 480
RGDFSRDFFEGCRAILLDRDRNPKWMPPRLEEVHDEVVEKYFSKV RRS
Sbjct: 421 RGDFSRDFFEGCRAILLDRDRNPKWMPPRLEEVHDEVVEKYFSKVDDPEWEDLDLPPRRS 480
Query: 481 HGRRLVPKL 489
HGRRLVPKL
Sbjct: 481 HGRRLVPKL 489
>Os10g0572700 Four-helical cytokine family protein
Length = 361
Score = 351 bits (900), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 169/187 (90%), Positives = 175/187 (93%)
Query: 303 RLSLLEESLKKVDTSDPFAICGIIDQYSQQPSLKEKSALNRLEIINKCFSKKTVEEIIAS 362
RL+LLEESLKKVDTSDPFAICGIIDQYSQQPSLKEKSALNRLEIINKCFSK+TVEEIIAS
Sbjct: 175 RLALLEESLKKVDTSDPFAICGIIDQYSQQPSLKEKSALNRLEIINKCFSKRTVEEIIAS 234
Query: 363 LEQEAPNVADEWIASAIQSMRKASPTSMKISLRSIREGRTQTVGECLRREYRMVCHVMRG 422
LEQEAPNVADEW+ASAIQS+RKASPTS+KISLRSIREGRTQTVGECLRREYRMVCHVMRG
Sbjct: 235 LEQEAPNVADEWVASAIQSLRKASPTSLKISLRSIREGRTQTVGECLRREYRMVCHVMRG 294
Query: 423 DFSRDFFEGCRAILLDRDRNPKWMPPRLEEVHDEVVEKYFSKVXXXXXXXXXXXXRRSHG 482
DFSRDFFEGCRAILLD+DRNPKWMPPRLEEVHDEVVEKYFSKV RRSHG
Sbjct: 295 DFSRDFFEGCRAILLDKDRNPKWMPPRLEEVHDEVVEKYFSKVDDPEWEDLDLPPRRSHG 354
Query: 483 RRLVPKL 489
RRLVPKL
Sbjct: 355 RRLVPKL 361
>Os10g0552900 Enoyl-CoA hydratase/isomerase domain containing protein
Length = 411
Score = 306 bits (785), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 156/345 (45%), Positives = 225/345 (65%)
Query: 119 QVLVEANGVTRTLVLNRPKQLNALSSAMITCFLRCFTAYEEDDGVKLLIVKGKGRAFCAG 178
+VLVE R VLNRP LNAL++ M + + ++E++ + +++KG GRAFCAG
Sbjct: 47 EVLVEGKASARAAVLNRPGHLNALTTTMGARLNKFYMSWEDNPDIGFVMMKGSGRAFCAG 106
Query: 179 GDVAAVVRSINNDSWKYGAHFFRNEFLLNYIIATYSKPQVSLLTGIVMGGGAGVSIHGRF 238
GDV + + I+ FF+ + Y++ TY KP V++L G+ MGGG GVSI G F
Sbjct: 107 GDVVRLHQLISEGKLDECKDFFKTLYSFIYVLGTYLKPHVAILDGVTMGGGGGVSIPGTF 166
Query: 239 RVVTDSTVFAMPETALGLFPDIGASYFLSRLLGFYGEYVGLTGVRLDAAEMLACGLATHF 298
R+VTD TVFA PE +G PD AS++LS L G GEY+ LTG +L+ +M+A GLATH+
Sbjct: 167 RIVTDRTVFATPEVHIGFHPDAAASFYLSHLTGHVGEYLALTGEKLNGVDMIALGLATHY 226
Query: 299 VPSDRLSLLEESLKKVDTSDPFAICGIIDQYSQQPSLKEKSALNRLEIINKCFSKKTVEE 358
SDRL+L++E L + T DP I + Y + S ++RLE+I+KCFS +TVEE
Sbjct: 227 SMSDRLNLVDERLATLLTDDPSVIDTSLTHYGDLVYPDKSSIVHRLEVIDKCFSLETVEE 286
Query: 359 IIASLEQEAPNVADEWIASAIQSMRKASPTSMKISLRSIREGRTQTVGECLRREYRMVCH 418
I+ ++E EA + ++W A++ +++ASP ++K+SLRSIREGR QT+ ECL REYRM +
Sbjct: 287 IVDAMEIEAARLNEDWSTLALKRLKEASPLALKVSLRSIREGRYQTLDECLVREYRMSIN 346
Query: 419 VMRGDFSRDFFEGCRAILLDRDRNPKWMPPRLEEVHDEVVEKYFS 463
+ FS +F EG RA L+++D PKW PP LE V ++V+ YF+
Sbjct: 347 GISEKFSHEFREGVRARLVEKDLAPKWDPPALEYVSADMVDSYFA 391
>Os01g0752200 Enoyl-CoA hydratase/isomerase domain containing protein
Length = 389
Score = 306 bits (784), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 152/343 (44%), Positives = 221/343 (64%), Gaps = 3/343 (0%)
Query: 120 VLVEANGVTRTLVLNRPKQLNALSSAMITCFLRCFTAYEEDDGVKLLIVKGKGRAFCAGG 179
VL + G R +LNRP+QLN +S ++ + ++E+D+ KL+I KG GRAF AGG
Sbjct: 17 VLGQETGGARVAILNRPRQLNVISDRVVYLLAQFLESWEKDEDAKLVIFKGAGRAFSAGG 76
Query: 180 DVAAVVRSINNDSWKYGAHFFRNEFLLNYIIATYSKPQVSLLTGIVMGGGAGVSIHGRFR 239
D+ ++DS + L Y I TY K V+L+ G+VMGGGA + +F
Sbjct: 77 DLKMFYEGKSDDS---CLEVVYRMYWLCYHIHTYKKTAVALVNGLVMGGGAAMVAPLKFA 133
Query: 240 VVTDSTVFAMPETALGLFPDIGASYFLSRLLGFYGEYVGLTGVRLDAAEMLACGLATHFV 299
VVT+ TVFA PE ++GL D SY SRL G+ GEY+ LTG RL+A EM+A GLATHFV
Sbjct: 134 VVTEKTVFATPEASVGLHTDCSFSYIHSRLPGYLGEYLALTGARLNAKEMIAAGLATHFV 193
Query: 300 PSDRLSLLEESLKKVDTSDPFAICGIIDQYSQQPSLKEKSALNRLEIINKCFSKKTVEEI 359
PS++L LE+ L ++T D A+ I+++S E S LN+L INKCFS +T+E+I
Sbjct: 194 PSEKLEELEKCLLNLNTGDESAVRAAIEEFSTDVQPDEDSILNKLPTINKCFSAETIEDI 253
Query: 360 IASLEQEAPNVADEWIASAIQSMRKASPTSMKISLRSIREGRTQTVGECLRREYRMVCHV 419
I + E E ++WIA+ ++ MR++SPTS+K++LRSIREGR Q++ ECL++E+R+ +
Sbjct: 254 IKAFESEGSIDGNQWIATVLKGMRRSSPTSLKMTLRSIREGRKQSLPECLKKEFRLTMNT 313
Query: 420 MRGDFSRDFFEGCRAILLDRDRNPKWMPPRLEEVHDEVVEKYF 462
+R + D +EG RA+ +D+D PKW P LEEV +E +++ F
Sbjct: 314 LRSVVTGDVYEGIRALSIDKDNAPKWSPATLEEVKNEDIDRLF 356
>Os10g0572800 Similar to CoA-thioester hydrolase CHY1
(3-hydroxyisobutyryl-coenzyme A hydrolase)
Length = 209
Score = 305 bits (780), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 149/178 (83%), Positives = 160/178 (89%), Gaps = 2/178 (1%)
Query: 98 RITGNK--KQIEAAKDIIKQAMSQVLVEANGVTRTLVLNRPKQLNALSSAMITCFLRCFT 155
+ TGN + + + ++ VLVEANGVTRTL++NRPKQLNALSSAMIT FLRCFT
Sbjct: 11 QFTGNSEIRLVYCKQIMLITCYIWVLVEANGVTRTLLMNRPKQLNALSSAMITGFLRCFT 70
Query: 156 AYEEDDGVKLLIVKGKGRAFCAGGDVAAVVRSINNDSWKYGAHFFRNEFLLNYIIATYSK 215
AYEED+GVKLLIVKGKGRAFCAGGDVAAVVRSINNDSWKY AHFFRNEFLLNYIIATY+K
Sbjct: 71 AYEEDEGVKLLIVKGKGRAFCAGGDVAAVVRSINNDSWKYSAHFFRNEFLLNYIIATYNK 130
Query: 216 PQVSLLTGIVMGGGAGVSIHGRFRVVTDSTVFAMPETALGLFPDIGASYFLSRLLGFY 273
PQVSLLTGIVMGGGAGVSIHGRFRVVT+STVFAMPETALGLFPDIGASYFLSRL GFY
Sbjct: 131 PQVSLLTGIVMGGGAGVSIHGRFRVVTESTVFAMPETALGLFPDIGASYFLSRLPGFY 188
>Os06g0594100 Enoyl-CoA hydratase/isomerase domain containing protein
Length = 434
Score = 180 bits (456), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 120/360 (33%), Positives = 183/360 (50%), Gaps = 23/360 (6%)
Query: 122 VEANGVTRTLVLNRPKQLNALSSAMITCFLRCFTAYEEDDGVKLLIVKGKG-RAFCAGGD 180
V NGV + L+RPK LNA++ M + +E + VK ++V+ RAF AG D
Sbjct: 68 VTPNGVA-VITLDRPKALNAMNLEMDLRYKAFLDEWETNPSVKCVLVESSSPRAFSAGMD 126
Query: 181 VAAVVRSINND-SWKYGAHFFRNEFLLNYIIATYSKPQVSLLTGIVMGGGAGVSIHGRFR 239
+ V I D S F E+ L I Y+KP + L+ G+ MG G G+S HGR+R
Sbjct: 127 IKGVAAEIQKDKSTPLVQKVFTAEYSLICKIHEYTKPYICLMDGVTMGFGIGLSGHGRYR 186
Query: 240 VVTDSTVFAMPETALGLFPDIGASYFLSRLL--GFYGEYVGLTGVRLDA-AEMLACGLAT 296
++T+ T+ AMPE +GLFPD+G +Y ++ G G Y+G+TG R+ + A+ L GL T
Sbjct: 187 IITERTLLAMPENGIGLFPDVGFAYIGAKAPGGGAVGSYLGMTGKRISSPADALFFGLGT 246
Query: 297 HFVPSDRLSLLEESLKKVD-TSDPF-AICGIIDQYSQQPSLKEKSALNRLEIINKCFSKK 354
H+VPS L L ESL + T DP + ++ ++ +P + II+ K
Sbjct: 247 HYVPSANLGPLRESLLSANFTDDPHRDVESLLTKFKNEPESGPQLDKFLPYIISSFGPDK 306
Query: 355 TVEEIIASLE---QEAPNVADEWIASAIQSMRKASPTSMKISLRSI---------REGRT 402
+V E + L+ Q EW A+ ++K +P S+ ++ + E
Sbjct: 307 SVAESVEELKKCSQSDDAAVAEWANEALAGLKKGAPFSLCLTQKHFSQVASAYRNNEHYL 366
Query: 403 QTVGECLRREYRMVCHVMRGDFSRDFFEGCRAILLDRDRNPKWMPPRLEEVHDEVVEKYF 462
+ ++ EYR+ +R DF EG RA+L+D+D+NPKW P LE+V VE F
Sbjct: 367 SKLAGVMKVEYRI---ALRSSVRNDFVEGVRAVLVDKDQNPKWKPATLEDVDKGEVESVF 423
>Os03g0310400 Enoyl-CoA hydratase/isomerase domain containing protein
Length = 268
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 72/171 (42%), Gaps = 8/171 (4%)
Query: 130 TLVLNRPKQLNALSSAMITCFLRCFTAYEEDDGVKLLIVKGKGRAFCAGGDVAAVVRSIN 189
+ +NRPK LNAL+ M+ F + DDGV +++ G+GRAFC+G D+ A
Sbjct: 25 VVTINRPKALNALTRPMMVSLAAAFRRLDADDGVAAVVLAGRGRAFCSGVDLTAAEEVFK 84
Query: 190 NDSWKYGAHFFRNEFLLNYIIATYSKPQVSLLTGIVMGGGAGVSIHGRFRVVTDSTVFAM 249
D A + KP V + G + G +++ V S F
Sbjct: 85 GDVKDPAADPVVQ-------MERCRKPIVGAIAGFAVTAGFEIALACDILVAGRSAKFID 137
Query: 250 PETALGLFPDIGASYFLSRLLG-FYGEYVGLTGVRLDAAEMLACGLATHFV 299
G+FP G S LSR++G V LT + + A GL H V
Sbjct: 138 THAKFGIFPSWGLSQKLSRVIGPNRAREVSLTCMPITAEMAEKWGLVNHIV 188
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.318 0.134 0.388
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 16,544,794
Number of extensions: 694833
Number of successful extensions: 2710
Number of sequences better than 1.0e-10: 7
Number of HSP's gapped: 2713
Number of HSP's successfully gapped: 7
Length of query: 489
Length of database: 17,035,801
Length adjustment: 105
Effective length of query: 384
Effective length of database: 11,553,331
Effective search space: 4436479104
Effective search space used: 4436479104
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 158 (65.5 bits)