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Os01g0752200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Enoyl-CoA hydratase/isomerase domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.18 (0.0541) R2 : 0.329
β1 : -1 (0.194) R2dD : 0.0404 R2D : 0.00433
β2 : 1.2 (0.132) R2dC : 0.122 R2C : 0.108
β3 : 1.74 (0.169) R2dE : 0.196 R2E : 0.169
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.134 (0.124) R2dN8 : 0.00289 R2N8 : 0.0156
σ : 0.985
deviance : 447.45
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_____
C
peak time of C : 8.58
E
wheather : humidity
threshold : 68.8
memory length : 4211
response mode : < th
dose dependency : dose independent
G
type of G : rect.
peak or start time of G : 10.9
open length of G : 0.883

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = < th, dose dependency = dose independent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
441.66 0.987 7.19 -1.05 1.24 1.69 0.131 2.35 -0.308 8.58 69.07 4208 10.9 0.933
448.16 0.986 7.19 -1 1.21 1.74 0.0499 -- -0.146 8.57 68.93 4211 10.9 0.898
441.71 0.979 7.19 -1.04 1.24 1.69 -- 2.34 -0.307 8.58 69.08 4206 10.9 0.941
447.45 0.985 7.18 -1 1.2 1.74 -- -- -0.134 8.58 68.8 4211 10.9 0.883
505.36 1.05 7.22 -1.01 -- 1.9 -- 2.27 -0.236 -- 68 4357 10.9 0.933
550.94 1.1 7.3 -0.769 1.16 -- -0.167 -- -0.667 8.28 -- -- -- --
551.02 1.1 7.3 -0.774 1.16 -- -- -- -0.667 8.28 -- -- -- --
514.63 1.06 7.17 -0.835 -- 2.02 -- -- -0.0715 -- 68.36 4357 11.1 0.751
471.76 1.01 7.18 -- 1.18 1.66 -- -- -0.0452 8.63 68.84 4200 11 0.866
625.18 1.17 7.33 -0.766 -- -- -- -- -0.654 -- -- -- -- --
566.82 1.11 7.28 -- 1.15 -- -- -- -0.581 8.33 -- -- -- --
523.79 1.07 7.17 -- -- 2.37 -- -- 0.162 -- 68.71 4574 11.4 0.45
640.67 1.18 7.31 -- -- -- -- -- -0.569 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 438.54 precipitation 0.1 14400 > th dose dependent rect. 17 1
2 444.03 wind 3.0 43200 < th dose dependent rect. 5 1
3 445.79 wind 3.0 43200 < th dose dependent rect. 4 3
5 448.46 precipitation 0.1 14400 > th dose independent rect. 17 1
7 449.90 humidity 80.0 14400 > th dose independent rect. 9 1
8 450.88 humidity 70.0 4320 < th dose independent rect. 11 1
9 451.33 precipitation 0.1 14400 > th dose dependent rect. 4 1
10 451.44 wind 1.0 43200 > th dose dependent rect. 1 1
12 451.73 precipitation 0.1 14400 < th dose independent rect. 4 1
13 451.73 precipitation 0.1 14400 < th dose dependent rect. 4 1
14 452.06 humidity 80.0 14400 < th dose independent rect. 9 2
15 452.12 precipitation 0.1 14400 > th dose independent rect. 4 1
16 452.41 wind 5.0 43200 < th dose dependent rect. 1 1
17 452.66 precipitation 0.1 14400 < th dose independent rect. 17 1
18 452.66 precipitation 0.1 14400 < th dose dependent rect. 17 1
21 453.98 humidity 80.0 1440 > th dose dependent rect. 5 6
30 455.49 precipitation 0.1 4320 > th dose independent rect. 24 17
31 455.52 precipitation 0.1 4320 < th dose independent rect. 1 16
32 455.52 precipitation 0.1 4320 < th dose dependent rect. 1 16
34 455.56 precipitation 0.1 4320 < th dose independent rect. 3 7
35 455.56 precipitation 0.1 4320 < th dose dependent rect. 3 7
38 455.75 wind 3.0 14400 < th dose independent rect. 1 3
52 456.61 precipitation 0.1 4320 > th dose independent rect. 3 7
57 456.75 humidity 80.0 14400 > th dose dependent rect. 9 1
58 456.89 precipitation 0.1 4320 > th dose dependent rect. 24 17
59 456.95 wind 3.0 14400 < th dose dependent rect. 1 5
62 457.19 wind 3.0 43200 < th dose dependent rect. 23 8
66 457.50 precipitation 0.1 4320 > th dose independent rect. 3 4
71 457.77 wind 3.0 14400 < th dose independent rect. 1 5
72 457.85 humidity 90.0 14400 > th dose dependent rect. 7 1
84 458.13 humidity 90.0 1440 > th dose dependent rect. 7 7
99 458.86 precipitation 0.1 4320 > th dose dependent rect. 3 7
103 459.16 precipitation 0.1 4320 > th dose dependent rect. 24 10
107 459.30 wind 9.0 14400 < th dose independent rect. 10 1
109 459.35 wind 3.0 14400 > th dose independent rect. 1 3
120 459.50 wind 1.0 43200 > th dose dependent rect. 5 1
126 459.68 wind 3.0 43200 < th dose independent rect. 5 1
127 459.68 precipitation 0.1 4320 > th dose dependent rect. 3 4
137 459.89 wind 3.0 14400 > th dose independent rect. 1 5
145 460.03 precipitation 0.1 4320 < th dose independent rect. 1 9
147 460.03 precipitation 0.1 4320 < th dose dependent rect. 1 9
176 460.51 humidity 90.0 14400 > th dose independent rect. 7 1
182 460.57 wind 9.0 14400 > th dose independent rect. 10 1
193 460.76 precipitation 0.1 4320 > th dose independent rect. 24 10
210 461.12 wind 3.0 14400 > th dose independent rect. 5 1
215 461.19 precipitation 0.1 4320 < th dose independent rect. 1 13
217 461.19 precipitation 0.1 4320 < th dose dependent rect. 1 13
245 461.72 wind 1.0 14400 > th dose dependent rect. 1 5
269 462.14 wind 3.0 14400 > th dose independent rect. 1 1
325 462.98 precipitation 0.1 14400 < th dose independent rect. 15 1
327 462.98 precipitation 0.1 14400 < th dose dependent rect. 15 1
331 463.01 precipitation 0.1 14400 > th dose independent rect. 15 1
332 463.01 precipitation 0.1 14400 > th dose dependent rect. 15 1
338 463.12 humidity 80.0 1440 < th dose independent rect. 2 10
359 463.42 wind 9.0 14400 < th dose independent rect. 6 5
418 464.32 precipitation 0.1 14400 > th dose dependent rect. 19 1
425 464.46 precipitation 0.1 14400 > th dose independent rect. 19 1
430 464.55 wind 1.0 1440 < th dose independent rect. 9 10
435 464.65 humidity 80.0 14400 < th dose dependent rect. 11 1
445 464.77 wind 1.0 1440 < th dose dependent rect. 9 10
448 464.82 wind 9.0 14400 > th dose independent rect. 7 4
466 465.06 precipitation 0.1 14400 < th dose independent rect. 19 1
467 465.06 precipitation 0.1 14400 < th dose dependent rect. 19 1
488 465.44 humidity 50.0 14400 > th dose dependent rect. 11 1
494 465.51 humidity 80.0 14400 > th dose dependent rect. 8 8
520 465.80 wind 1.0 1440 < th dose independent rect. 9 6
535 465.97 humidity 80.0 1440 > th dose independent rect. 1 11
552 466.28 precipitation 0.1 4320 > th dose dependent sin 6 NA
563 466.37 wind 1.0 1440 < th dose dependent rect. 12 7
571 466.49 wind 1.0 1440 < th dose dependent rect. 9 5
576 466.61 wind 1.0 1440 < th dose independent rect. 12 1
578 466.61 humidity 80.0 14400 > th dose dependent rect. 13 1
604 467.00 humidity 60.0 14400 > th dose independent rect. 15 2
625 467.28 precipitation 0.1 4320 < th dose independent sin 5 NA
627 467.28 precipitation 0.1 4320 < th dose dependent sin 5 NA
628 467.31 precipitation 0.1 4320 > th dose independent sin 5 NA
646 467.50 precipitation 0.1 14400 > th dose independent rect. 13 4
647 467.50 precipitation 0.1 14400 < th dose independent rect. 13 4
648 467.50 precipitation 0.1 14400 < th dose dependent rect. 13 4
656 467.59 wind 1.0 1440 < th dose independent rect. 12 7
670 467.85 wind 1.0 1440 < th dose dependent rect. 12 2
677 467.91 humidity 90.0 14400 < th dose independent rect. 7 1
685 468.02 humidity 60.0 14400 < th dose independent rect. 14 3
691 468.07 precipitation 0.1 14400 > th dose dependent rect. 13 4
697 468.12 humidity 70.0 1440 > th dose dependent sin 6 NA
698 468.13 humidity 60.0 14400 < th dose independent rect. 14 1
736 468.46 radiation 10.0 4320 < th dose dependent rect. 7 1
756 468.69 humidity 90.0 14400 > th dose dependent rect. 16 1
757 468.69 humidity 90.0 14400 < th dose dependent rect. 14 1
765 468.73 humidity 80.0 14400 > th dose dependent rect. 13 4
766 468.73 humidity 90.0 14400 < th dose dependent rect. 8 8
775 468.83 humidity 80.0 14400 > th dose independent rect. 9 5
786 468.94 wind 9.0 43200 > th dose dependent rect. 12 1
798 469.04 humidity 90.0 14400 < th dose dependent rect. 11 4
806 469.15 humidity 80.0 14400 > th dose independent rect. 9 7
815 469.20 humidity 50.0 14400 > th dose dependent rect. 7 9
868 469.59 wind 1.0 1440 > th dose independent rect. 12 1
890 469.85 wind 1.0 1440 > th dose independent rect. 9 5
893 469.88 wind 1.0 4320 > th dose independent rect. 17 2
917 470.07 wind 1.0 1440 > th dose independent rect. 9 10
936 470.20 wind 1.0 1440 < th dose independent rect. 12 3
945 470.30 wind 9.0 43200 < th dose independent rect. 12 1
952 470.37 humidity 50.0 14400 > th dose dependent rect. 8 4