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Os12g0264500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to CoA-thioester hydrolase CHY1 (3-hydroxyisobutyryl-coenzyme A hydrolase).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.6 (0.0151) R2 : 0.447
β1 : -0.841 (0.0553) R2dD : 0.291 R2D : 0.109
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.465 (0.0322) R2dN8 : 0.338 R2N8 : 0.157
σ : 0.283
deviance : 36.8
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
18.48 0.202 11.6 -0.891 0.389 0.629 -0.093 -0.078 -0.425 4.96 93.57 233 -- --
18.47 0.2 11.6 -0.888 0.394 0.667 -0.0971 -- -0.428 4.93 93.79 226 -- --
18.48 0.2 11.6 -0.884 0.396 0.664 -- -0.126 -0.428 4.93 93.82 225 -- --
18.49 0.2 11.6 -0.887 0.397 0.671 -- -- -0.429 4.91 93.86 222 -- --
24.13 0.229 11.5 -0.903 -- 0.848 -- -0.0777 -0.36 -- 92.5 240 -- --
21.76 0.219 11.6 -0.86 0.535 -- 0.0508 -- -0.479 5.03 -- -- -- --
21.77 0.218 11.6 -0.86 0.535 -- -- -- -0.479 5.03 -- -- -- --
23.79 0.227 11.5 -0.922 -- 0.694 -- -- -0.366 -- 90.43 264 -- --
39.01 0.291 11.5 -- 0.426 0.614 -- -- -0.341 4.8 94.2 330 -- --
36.8 0.283 11.6 -0.841 -- -- -- -- -0.465 -- -- -- -- --
41.28 0.301 11.5 -- 0.52 -- -- -- -0.383 5.09 -- -- -- --
45.72 0.315 11.5 -- -- 0.934 -- -- -0.293 -- 93.7 215 -- --
55.47 0.348 11.5 -- -- -- -- -- -0.372 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 14.84 temperature 10.0 270 > th dose dependent rect. 6 7
3 15.01 temperature 25.0 270 < th dose independent rect. 1 8
10 15.33 temperature 10.0 270 > th dose dependent rect. 20 16
17 15.61 radiation 1.0 270 > th dose independent rect. 6 8
26 15.76 radiation 1.0 270 < th dose independent rect. 3 10
27 15.76 wind 9.0 270 < th dose dependent rect. 8 17
28 15.77 radiation 1.0 270 < th dose independent rect. 3 8
33 15.78 radiation 40.0 270 < th dose dependent rect. 1 7
37 15.82 radiation 20.0 270 < th dose independent rect. 1 7
41 15.83 wind 9.0 270 < th dose independent rect. 8 17
42 15.84 radiation 1.0 270 < th dose independent rect. 3 14
48 15.87 radiation 1.0 270 < th dose dependent rect. 3 10
53 15.89 humidity 50.0 270 > th dose dependent rect. 1 7
54 15.89 radiation 1.0 270 < th dose dependent rect. 3 7
58 15.90 temperature 30.0 270 < th dose dependent rect. 1 7
64 15.94 wind 9.0 270 < th dose independent rect. 1 7
65 15.94 temperature 10.0 270 > th dose independent rect. 1 7
68 15.94 humidity 50.0 270 > th dose independent rect. 1 7
70 15.94 atmosphere 995.0 270 > th dose independent rect. 1 7
71 15.94 atmosphere 1015.0 270 < th dose independent rect. 1 7
72 15.94 temperature 10.0 270 > th dose independent rect. 8 17
73 15.95 radiation 1.0 270 < th dose independent sin 2 NA
74 15.95 radiation 40.0 270 < th dose independent rect. 1 7
76 15.95 precipitation 0.1 270 < th dose independent rect. 8 17
77 15.95 precipitation 0.1 270 < th dose dependent rect. 8 17
82 15.98 radiation 1.0 270 > th dose independent sin 2 NA
91 16.00 temperature 10.0 10 > th dose dependent rect. 8 8
94 16.02 precipitation 0.1 270 < th dose independent rect. 1 7
96 16.02 precipitation 0.1 270 < th dose dependent rect. 1 7
110 16.06 temperature 10.0 10 > th dose dependent rect. 23 15
114 16.08 humidity 50.0 270 > th dose independent rect. 6 8
117 16.08 temperature 30.0 90 < th dose dependent rect. 3 8
125 16.10 radiation 1.0 270 < th dose dependent rect. 3 14
126 16.11 wind 9.0 270 < th dose independent rect. 6 8
167 16.16 temperature 15.0 270 > th dose independent rect. 6 8
169 16.16 precipitation 0.1 270 < th dose independent rect. 6 8
172 16.16 precipitation 0.1 270 < th dose dependent rect. 6 8
175 16.17 wind 9.0 270 < th dose independent rect. 6 21
178 16.18 humidity 50.0 270 > th dose dependent rect. 3 3
185 16.19 atmosphere 995.0 270 > th dose independent rect. 6 8
186 16.19 atmosphere 1015.0 270 < th dose independent rect. 6 8
187 16.19 temperature 10.0 270 > th dose independent rect. 14 16
190 16.19 temperature 10.0 90 > th dose dependent rect. 8 19
211 16.24 humidity 50.0 270 > th dose independent rect. 14 16
226 16.27 precipitation 0.1 270 < th dose independent rect. 6 21
227 16.27 radiation 1.0 270 < th dose dependent sin 2 NA
231 16.27 precipitation 0.1 270 < th dose dependent rect. 6 21
232 16.28 radiation 40.0 270 < th dose independent rect. 14 16
235 16.29 wind 9.0 270 < th dose independent rect. 3 3
236 16.29 temperature 10.0 270 > th dose independent rect. 3 3
239 16.29 humidity 50.0 270 > th dose independent rect. 3 3
242 16.29 atmosphere 995.0 270 > th dose independent rect. 3 3
243 16.29 atmosphere 1015.0 270 < th dose independent rect. 3 3
244 16.29 radiation 20.0 270 < th dose independent rect. 3 3
248 16.29 temperature 10.0 270 > th dose independent rect. 6 21
255 16.30 wind 9.0 270 < th dose independent rect. 14 16
264 16.32 radiation 40.0 270 < th dose dependent rect. 3 3
281 16.35 temperature 25.0 270 > th dose independent rect. 22 14
286 16.36 precipitation 0.1 270 < th dose independent rect. 3 3
288 16.36 precipitation 0.1 270 < th dose dependent rect. 3 3
304 16.37 atmosphere 1015.0 270 < th dose independent rect. 8 17
311 16.38 precipitation 0.1 270 < th dose independent rect. 19 7
312 16.38 humidity 50.0 270 > th dose independent rect. 21 15
314 16.38 temperature 30.0 270 < th dose dependent rect. 3 3
317 16.38 precipitation 0.1 270 < th dose dependent rect. 19 7
325 16.40 temperature 20.0 270 > th dose independent rect. 7 6
349 16.42 atmosphere 995.0 270 > th dose independent rect. 8 17
359 16.43 temperature 10.0 270 > th dose independent rect. 19 7
360 16.43 temperature 30.0 270 < th dose independent rect. 19 7
362 16.43 humidity 50.0 270 > th dose independent rect. 19 7
364 16.43 atmosphere 995.0 270 > th dose independent rect. 19 7
365 16.43 radiation 1.0 270 < th dose independent rect. 19 7
371 16.43 temperature 10.0 270 > th dose independent rect. 2 17
372 16.43 atmosphere 1015.0 270 < th dose independent rect. 2 17
373 16.43 temperature 25.0 270 < th dose independent rect. 1 18
376 16.43 radiation 1.0 270 < th dose dependent rect. 19 7
384 16.44 wind 9.0 270 < th dose independent rect. 19 7
388 16.45 wind 9.0 270 < th dose dependent rect. 3 3
415 16.49 wind 7.0 270 < th dose independent rect. 21 15
429 16.50 temperature 10.0 10 > th dose dependent rect. 8 19
437 16.52 precipitation 0.1 270 < th dose independent rect. 14 16
438 16.52 temperature 25.0 90 < th dose independent rect. 3 18
444 16.52 precipitation 0.1 270 < th dose dependent rect. 14 16
455 16.54 wind 1.0 270 > th dose independent rect. 6 8
462 16.55 precipitation 0.1 270 < th dose independent rect. 2 17
471 16.55 wind 9.0 270 < th dose dependent rect. 7 7
476 16.55 precipitation 0.1 270 < th dose dependent rect. 2 17
480 16.56 wind 5.0 270 < th dose independent rect. 19 7
484 16.56 temperature 30.0 90 < th dose dependent rect. 3 16
509 16.59 temperature 25.0 90 < th dose independent rect. 3 16
522 16.60 temperature 30.0 90 < th dose dependent rect. 3 18
550 16.63 temperature 15.0 270 > th dose independent rect. 12 9
551 16.63 precipitation 0.1 270 < th dose independent rect. 21 15
557 16.63 precipitation 0.1 270 < th dose dependent rect. 21 15
569 16.64 wind 9.0 270 < th dose independent rect. 2 17
635 16.67 wind 9.0 270 < th dose dependent rect. 1 6
637 16.67 wind 9.0 270 < th dose dependent rect. 19 7
643 16.68 humidity 90.0 90 < th dose independent rect. 8 7
666 16.69 atmosphere 995.0 270 > th dose independent rect. 14 16
667 16.69 wind 1.0 270 > th dose independent rect. 8 17
707 16.71 temperature 25.0 270 < th dose independent rect. 1 12
713 16.72 humidity 90.0 270 > th dose independent rect. 3 4
740 16.73 temperature 10.0 270 > th dose independent rect. 21 15
741 16.73 atmosphere 995.0 270 > th dose independent rect. 21 15
805 16.77 atmosphere 1015.0 270 < th dose independent rect. 19 7
824 16.78 wind 1.0 270 > th dose independent rect. 12 9
870 16.81 atmosphere 995.0 270 > th dose independent rect. 2 17
959 16.86 atmosphere 1015.0 270 < th dose independent rect. 12 8
960 16.86 radiation 1.0 10 > th dose independent rect. 8 8
993 16.87 radiation 40.0 90 < th dose dependent rect. 15 17