BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os12g0210200 Os12g0210200|AK069105
(214 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os12g0210200 Similar to Glutathione S-transferase GST 18 (E... 442 e-124
Os12g0210300 Similar to Glutathione S-transferase GST 18 (E... 342 9e-95
AK073415 342 9e-95
Os02g0564000 Similar to Glutathione S-transferase 268 2e-72
Os11g0245100 Glutathione S-transferase, N-terminal domain c... 73 2e-13
>Os12g0210200 Similar to Glutathione S-transferase GST 18 (EC 2.5.1.18)
Length = 214
Score = 442 bits (1136), Expect = e-124, Method: Compositional matrix adjust.
Identities = 214/214 (100%), Positives = 214/214 (100%)
Query: 1 MAAAEKTKPVLYSEWMSSCSYRVRIALNLKGIDYEYRAVTRGDPDYGKINPIKYVPALVD 60
MAAAEKTKPVLYSEWMSSCSYRVRIALNLKGIDYEYRAVTRGDPDYGKINPIKYVPALVD
Sbjct: 1 MAAAEKTKPVLYSEWMSSCSYRVRIALNLKGIDYEYRAVTRGDPDYGKINPIKYVPALVD 60
Query: 61 GDFTISDSLAIILYLEDKYPQHPLLPQDLKKKALNMQIANIVCSSIQPLQCYAVIGLADG 120
GDFTISDSLAIILYLEDKYPQHPLLPQDLKKKALNMQIANIVCSSIQPLQCYAVIGLADG
Sbjct: 61 GDFTISDSLAIILYLEDKYPQHPLLPQDLKKKALNMQIANIVCSSIQPLQCYAVIGLADG 120
Query: 121 KMSANESLQIVQHYTDKGFRAIEKLLEGCRSKYATGDEVQLADVFLAPQIHAGITRFQID 180
KMSANESLQIVQHYTDKGFRAIEKLLEGCRSKYATGDEVQLADVFLAPQIHAGITRFQID
Sbjct: 121 KMSANESLQIVQHYTDKGFRAIEKLLEGCRSKYATGDEVQLADVFLAPQIHAGITRFQID 180
Query: 181 MSKYPILARFYKAYMELPAFQAAVPENQPDAPSS 214
MSKYPILARFYKAYMELPAFQAAVPENQPDAPSS
Sbjct: 181 MSKYPILARFYKAYMELPAFQAAVPENQPDAPSS 214
>Os12g0210300 Similar to Glutathione S-transferase GST 18 (EC 2.5.1.18)
Length = 212
Score = 342 bits (878), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 162/208 (77%), Positives = 184/208 (88%), Gaps = 1/208 (0%)
Query: 7 TKPVLYSEWMSSCSYRVRIALNLKGIDYEYRAVT-RGDPDYGKINPIKYVPALVDGDFTI 65
+KP+LY W+SSCS+R+RI LNLKG+DYEY++V R DPDY KINPIKY+PALVDGD +
Sbjct: 4 SKPILYGAWISSCSHRIRIVLNLKGVDYEYKSVNPRTDPDYEKINPIKYIPALVDGDLVV 63
Query: 66 SDSLAIILYLEDKYPQHPLLPQDLKKKALNMQIANIVCSSIQPLQCYAVIGLADGKMSAN 125
SDSLAI LYLEDKYPQH LLP+DLKKKALN+QIANIVCSSIQPLQ YAVIGL +GK+S +
Sbjct: 64 SDSLAIALYLEDKYPQHALLPKDLKKKALNLQIANIVCSSIQPLQGYAVIGLHEGKLSPD 123
Query: 126 ESLQIVQHYTDKGFRAIEKLLEGCRSKYATGDEVQLADVFLAPQIHAGITRFQIDMSKYP 185
ESLQIVQHY DKGF+AIEKLLEG KYATGDEVQL DVFLAPQIHAGI RFQID++KYP
Sbjct: 124 ESLQIVQHYIDKGFKAIEKLLEGSNFKYATGDEVQLGDVFLAPQIHAGINRFQIDITKYP 183
Query: 186 ILARFYKAYMELPAFQAAVPENQPDAPS 213
LAR + YME+PAFQAA+P+NQPDAPS
Sbjct: 184 NLARLHDTYMEIPAFQAALPKNQPDAPS 211
>AK073415
Length = 212
Score = 342 bits (878), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 162/208 (77%), Positives = 184/208 (88%), Gaps = 1/208 (0%)
Query: 7 TKPVLYSEWMSSCSYRVRIALNLKGIDYEYRAVT-RGDPDYGKINPIKYVPALVDGDFTI 65
+KP+LY W+SSCS+R+RI LNLKG+DYEY++V R DPDY KINPIKY+PALVDGD +
Sbjct: 4 SKPILYGAWISSCSHRIRIVLNLKGVDYEYKSVNPRTDPDYEKINPIKYIPALVDGDLVV 63
Query: 66 SDSLAIILYLEDKYPQHPLLPQDLKKKALNMQIANIVCSSIQPLQCYAVIGLADGKMSAN 125
SDSLAI LYLEDKYPQH LLP+DLKKKALN+QIANIVCSSIQPLQ YAVIGL +GK+S +
Sbjct: 64 SDSLAIALYLEDKYPQHALLPKDLKKKALNLQIANIVCSSIQPLQGYAVIGLHEGKLSPD 123
Query: 126 ESLQIVQHYTDKGFRAIEKLLEGCRSKYATGDEVQLADVFLAPQIHAGITRFQIDMSKYP 185
ESLQIVQHY DKGF+AIEKLLEG KYATGDEVQL DVFLAPQIHAGI RFQID++KYP
Sbjct: 124 ESLQIVQHYIDKGFKAIEKLLEGSNFKYATGDEVQLGDVFLAPQIHAGINRFQIDITKYP 183
Query: 186 ILARFYKAYMELPAFQAAVPENQPDAPS 213
LAR + YME+PAFQAA+P+NQPDAPS
Sbjct: 184 NLARLHDTYMEIPAFQAALPKNQPDAPS 211
>Os02g0564000 Similar to Glutathione S-transferase
Length = 237
Score = 268 bits (686), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 134/221 (60%), Positives = 161/221 (72%), Gaps = 17/221 (7%)
Query: 11 LYSEWMSSCSYRVRIALNLKGIDYEYRAVT-----RGDPDYGKINPIKYVPALVDGDFTI 65
LYS W SSCS+RVRIALNLKG++YEY+AV DP++ K+NP+K+VPALVDGD I
Sbjct: 16 LYSYWRSSCSHRVRIALNLKGLEYEYKAVNLLKGEHSDPEFMKVNPMKFVPALVDGDAVI 75
Query: 66 SDSLAIILYLEDKYPQHPLLPQDLKKKALNMQIANIVCSSIQPLQCYAVIGLAD------ 119
DS AI LYLEDKYP+HPLLPQDLK KALN+QIA+IVCS IQPL V+ D
Sbjct: 76 GDSYAIALYLEDKYPEHPLLPQDLKMKALNLQIASIVCSGIQPLHNLTVLVRTDLHSISY 135
Query: 120 ------GKMSANESLQIVQHYTDKGFRAIEKLLEGCRSKYATGDEVQLADVFLAPQIHAG 173
K+ ES+ Q D+GF A E L++GC KYATGDEV+LADVFLAPQI+A
Sbjct: 136 CHRFIEKKVGTGESIPWTQQQIDRGFAAAENLVKGCAGKYATGDEVRLADVFLAPQIYAA 195
Query: 174 ITRFQIDMSKYPILARFYKAYMELPAFQAAVPENQPDAPSS 214
+TRFQI+M YP LAR ++ YM+ PAFQAA+P+ QPDAPSS
Sbjct: 196 VTRFQINMLNYPTLARLHEEYMKHPAFQAALPDRQPDAPSS 236
>Os11g0245100 Glutathione S-transferase, N-terminal domain containing protein
Length = 104
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/62 (56%), Positives = 46/62 (74%), Gaps = 5/62 (8%)
Query: 2 AAAEKTKPVLYSEWMSSCSYRVRIALNLKGIDYEYRAVT-----RGDPDYGKINPIKYVP 56
AAA + + LYS W SSCSYRVRIAL+LKG+DYEY+ + + P++ K+NP+KYVP
Sbjct: 19 AAAPERRLKLYSFWRSSCSYRVRIALSLKGLDYEYKPINLLANEQSHPEFEKLNPMKYVP 78
Query: 57 AL 58
AL
Sbjct: 79 AL 80
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.320 0.136 0.398
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 7,235,054
Number of extensions: 282564
Number of successful extensions: 635
Number of sequences better than 1.0e-10: 5
Number of HSP's gapped: 639
Number of HSP's successfully gapped: 5
Length of query: 214
Length of database: 17,035,801
Length adjustment: 97
Effective length of query: 117
Effective length of database: 11,971,043
Effective search space: 1400612031
Effective search space used: 1400612031
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 154 (63.9 bits)