Os12g0210200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Glutathione S-transferase GST 18 (EC 2.5.1.18).
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Os12g0210200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Glutathione S-transferase GST 18 (EC 2.5.1.18).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 60.94 | 0.367 | 8.55 | -0.922 | 1.25 | 1.09 | 0.462 | -1.31 | -0.587 | 1.2 | 25.41 | 1804 | -- | -- |
| 61.4 | 0.365 | 8.51 | -0.616 | 1.24 | 0.98 | 0.444 | -- | -0.515 | 1.17 | 25.44 | 1815 | -- | -- |
| 61.78 | 0.366 | 8.55 | -0.968 | 1.25 | 1.12 | -- | -1.47 | -0.582 | 1.24 | 25.7 | 1813 | -- | -- |
| 62.24 | 0.367 | 8.51 | -0.616 | 1.25 | 0.965 | -- | -- | -0.511 | 1.18 | 25.5 | 1813 | -- | -- |
| 136.87 | 0.545 | 8.55 | -1.01 | -- | 1.34 | -- | -1.05 | -0.656 | -- | 24 | 2481 | -- | -- |
| 90.54 | 0.446 | 8.5 | -0.318 | 1.27 | -- | 0.533 | -- | -0.421 | 0.815 | -- | -- | -- | -- |
| 91.74 | 0.449 | 8.5 | -0.337 | 1.27 | -- | -- | -- | -0.424 | 0.839 | -- | -- | -- | -- |
| 123.92 | 0.518 | 8.54 | -0.762 | -- | 1.43 | -- | -- | -0.606 | -- | 24.02 | 1050 | -- | -- |
| 71.67 | 0.394 | 8.49 | -- | 1.24 | 0.832 | -- | -- | -0.398 | 1.1 | 26.3 | 1813 | -- | -- |
| 191.64 | 0.647 | 8.48 | -0.291 | -- | -- | -- | -- | -0.4 | -- | -- | -- | -- | -- |
| 94.74 | 0.455 | 8.49 | -- | 1.26 | -- | -- | -- | -0.386 | 0.827 | -- | -- | -- | -- |
| 136.33 | 0.544 | 8.5 | -- | -- | 1.31 | -- | -- | -0.493 | -- | 24.29 | 1041 | -- | -- |
| 193.88 | 0.65 | 8.47 | -- | -- | -- | -- | -- | -0.368 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 56.69 | temperature | 10 | 270 | > th | dose dependent | rect. | 11 | 21 |
| 7 | 57.69 | temperature | 10 | 270 | > th | dose dependent | rect. | 11 | 10 |
| 12 | 58.60 | temperature | 30 | 270 | < th | dose dependent | rect. | 7 | 18 |
| 28 | 59.71 | temperature | 10 | 270 | > th | dose dependent | rect. | 1 | 18 |
| 34 | 59.90 | temperature | 10 | 270 | > th | dose dependent | rect. | 24 | 21 |
| 46 | 60.26 | temperature | 30 | 270 | < th | dose independent | rect. | 7 | 17 |
| 49 | 60.41 | temperature | 30 | 90 | < th | dose independent | rect. | 9 | 18 |
| 110 | 61.88 | temperature | 25 | 1440 | > th | dose dependent | rect. | 11 | 9 |
| 149 | 62.16 | temperature | 25 | 1440 | > th | dose dependent | sin | 20 | NA |
| 159 | 62.20 | temperature | 20 | 1440 | > th | dose dependent | rect. | 6 | 16 |
| 170 | 62.23 | temperature | 30 | 270 | < th | dose independent | rect. | 6 | 8 |
| 205 | 62.30 | temperature | 10 | 1440 | > th | dose dependent | rect. | 5 | 16 |
| 212 | 62.31 | temperature | 10 | 1440 | > th | dose dependent | rect. | 3 | 16 |
| 223 | 62.31 | temperature | 25 | 1440 | > th | dose dependent | rect. | 11 | 20 |
| 257 | 62.34 | temperature | 15 | 1440 | > th | dose dependent | rect. | 3 | 13 |
| 273 | 62.35 | temperature | 15 | 1440 | > th | dose dependent | sin | 1 | NA |
| 530 | 62.53 | temperature | 30 | 270 | < th | dose independent | rect. | 19 | 17 |
| 621 | 62.59 | temperature | 25 | 1440 | > th | dose dependent | no | NA | NA |
| 644 | 62.60 | temperature | 25 | 1440 | > th | dose dependent | rect. | 20 | 23 |
| 713 | 62.65 | temperature | 20 | 1440 | > th | dose dependent | rect. | 18 | 23 |
| 730 | 62.66 | temperature | 25 | 1440 | > th | dose dependent | rect. | 14 | 23 |
| 751 | 62.68 | temperature | 20 | 1440 | > th | dose dependent | rect. | 6 | 3 |
| 889 | 62.78 | temperature | 10 | 1440 | > th | dose dependent | rect. | 6 | 3 |
| 922 | 62.81 | temperature | 15 | 10 | > th | dose dependent | rect. | 13 | 9 |