Os11g0245100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Glutathione S-transferase, N-terminal domain containing protein.
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Os11g0245100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Glutathione S-transferase, N-terminal domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 377.81 | 0.913 | 3.75 | 2.64 | 1.05 | 2.02 | 0.888 | 3.3 | 1.08 | 2.13 | 80.12 | 1467 | -- | -- |
| 385.47 | 0.914 | 3.75 | 3.01 | 1.05 | 2.14 | 0.994 | -- | 1.11 | 2.15 | 77.65 | 1446 | -- | -- |
| 379.3 | 0.907 | 3.76 | 2.6 | 0.939 | 2 | -- | 3.39 | 1.07 | 1.89 | 81 | 1583 | -- | -- |
| 389.58 | 0.919 | 3.75 | 2.98 | 1.04 | 2.11 | -- | -- | 1.11 | 2.04 | 77.74 | 1454 | -- | -- |
| 421.15 | 0.956 | 3.74 | 2.65 | -- | 2.41 | -- | 3.1 | 1.11 | -- | 81 | 1699 | -- | -- |
| 444.98 | 0.989 | 3.77 | 2.86 | 1.06 | -- | 0.715 | -- | 1.01 | 1.92 | -- | -- | -- | -- |
| 446.95 | 0.99 | 3.77 | 2.84 | 1.06 | -- | -- | -- | 1.01 | 1.87 | -- | -- | -- | -- |
| 421.91 | 0.961 | 3.77 | 2.98 | -- | 0.917 | -- | -- | 1.01 | -- | 77.74 | 1454 | -- | -- |
| 551.75 | 1.09 | 3.7 | -- | 0.882 | 2.68 | -- | -- | 1.21 | 1.19 | 88 | 1964 | -- | -- |
| 514.8 | 1.06 | 3.76 | 2.89 | -- | -- | -- | -- | 1.03 | -- | -- | -- | -- | -- |
| 659.81 | 1.2 | 3.84 | -- | 1.11 | -- | -- | -- | 0.692 | 1.94 | -- | -- | -- | -- |
| 605.23 | 1.15 | 3.75 | -- | -- | 2.83 | -- | -- | 1.09 | -- | 87.9 | 1761 | -- | -- |
| 734.43 | 1.26 | 3.83 | -- | -- | -- | -- | -- | 0.712 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 373.96 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 9 | 15 |
| 5 | 374.31 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 9 | 15 |
| 37 | 375.71 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 18 | 1 |
| 58 | 376.44 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 5 | 18 |
| 91 | 376.95 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 3 | 19 |
| 103 | 377.05 | humidity | 80.0 | 1440 | > th | dose independent | sin | 20 | NA |
| 104 | 377.06 | humidity | 80.0 | 1440 | < th | dose independent | sin | 19 | NA |
| 129 | 377.34 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 13 | 23 |
| 182 | 377.73 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 8 | 14 |
| 192 | 377.82 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 17 | 23 |
| 196 | 377.89 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 22 | 23 |
| 205 | 378.01 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 13 | 3 |
| 206 | 378.03 | humidity | 80.0 | 1440 | > th | dose independent | no | NA | NA |
| 218 | 378.09 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 13 | 23 |
| 251 | 378.49 | humidity | 80.0 | 1440 | < th | dose independent | no | NA | NA |
| 255 | 378.54 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 16 | 23 |
| 299 | 379.09 | humidity | 70.0 | 1440 | > th | dose dependent | sin | 21 | NA |
| 302 | 379.11 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 14 | 1 |
| 329 | 379.42 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 19 | 23 |
| 335 | 379.54 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 15 | 3 |
| 341 | 379.58 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 15 | 1 |
| 354 | 379.67 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 13 | 6 |
| 367 | 379.81 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 13 | 4 |
| 379 | 379.88 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 15 | 1 |
| 417 | 380.29 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 10 | 8 |
| 419 | 380.30 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 16 | 23 |
| 433 | 380.45 | humidity | 70.0 | 1440 | > th | dose dependent | no | NA | NA |
| 438 | 380.48 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 10 | 23 |
| 441 | 380.52 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 13 | 23 |
| 510 | 381.14 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 13 | 4 |
| 628 | 381.82 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 10 | 8 |
| 640 | 381.91 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 17 | 4 |
| 656 | 382.03 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 15 | 6 |
| 680 | 382.16 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 15 | 8 |
| 689 | 382.21 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 17 | 3 |
| 718 | 382.37 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 15 | 8 |
| 730 | 382.44 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 15 | 6 |
| 750 | 382.58 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 15 | 3 |
| 808 | 382.81 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 13 | 1 |
| 847 | 382.95 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 10 | 10 |
| 907 | 383.20 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 13 | 4 |
| 929 | 383.29 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 13 | 4 |
| 931 | 383.29 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 13 | 4 |