BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os12g0143200 Os12g0143200|AK106270
         (414 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os12g0143200  SPla/RYanodine receptor SPRY domain containing...   630   0.0  
Os11g0146500  SPla/RYanodine receptor SPRY domain containing...   578   e-165
Os11g0145500  SPla/RYanodine receptor SPRY domain containing...   280   1e-75
Os11g0145600  Conserved hypothetical protein                      220   1e-57

>Os12g0143200 SPla/RYanodine receptor SPRY domain containing protein
          Length = 414

 Score =  630 bits (1626), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 321/389 (82%), Positives = 321/389 (82%)

Query: 26  TPMSDATPSAADTPNLPDTPASASAEPETPFSXXXXXXXXXXXXXXXXXXXXXXXTNPLG 85
           TPMSDATPSAADTPNLPDTPASASAEPETPFS                       TNPLG
Sbjct: 26  TPMSDATPSAADTPNLPDTPASASAEPETPFSDAALADASDADASGVAAPPDDDGTNPLG 85

Query: 86  GAMKHMALXXXXXXXXXXXXXXXXXVWTRPNSRKGKKKAKQPXXXXXXXXXXXXXRLPKP 145
           GAMKHMAL                 VWTRPNSRKGKKKAKQP             RLPKP
Sbjct: 86  GAMKHMALAPPAPPSKKSKKKNSNSVWTRPNSRKGKKKAKQPANALAGGSGGANGRLPKP 145

Query: 146 SSGEDELVLTPAPRFAAERNDDAPDRPVLLSRVFKSDKVEVSDDRLTAGSTKGYRMVRAT 205
           SSGEDELVLTPAPRFAAERNDDAPDRPVLLSRVFKSDKVEVSDDRLTAGSTKGYRMVRAT
Sbjct: 146 SSGEDELVLTPAPRFAAERNDDAPDRPVLLSRVFKSDKVEVSDDRLTAGSTKGYRMVRAT 205

Query: 206 RGVAAGAWYFEVKVLHLGSTGHTRLGWATNNADIHAPVGYDVFGFGYRDMDGTKVHKAWR 265
           RGVAAGAWYFEVKVLHLGSTGHTRLGWATNNADIHAPVGYDVFGFGYRDMDGTKVHKAWR
Sbjct: 206 RGVAAGAWYFEVKVLHLGSTGHTRLGWATNNADIHAPVGYDVFGFGYRDMDGTKVHKAWR 265

Query: 266 ANYAEQGYGDGDVLGFYIHLPDGELYEPKQPFLVHYKGLPFRAEAPKAAEQKTPDPVPGS 325
           ANYAEQGYGDGDVLGFYIHLPDGELYEPKQPFLVHYKGLPFRAEAPKAAEQKTPDPVPGS
Sbjct: 266 ANYAEQGYGDGDVLGFYIHLPDGELYEPKQPFLVHYKGLPFRAEAPKAAEQKTPDPVPGS 325

Query: 326 EICYFKNGICQGTAFVDIPGGRYYPAASMYTLPDQPNCQVRXXXXXXXXXXXXXXXGRLI 385
           EICYFKNGICQGTAFVDIPGGRYYPAASMYTLPDQPNCQVR               GRLI
Sbjct: 326 EICYFKNGICQGTAFVDIPGGRYYPAASMYTLPDQPNCQVRFNFGPNFEFFPEDFGGRLI 385

Query: 386 PRPMSDVPYRPFELANGGPAENGTAEKNI 414
           PRPMSDVPYRPFELANGGPAENGTAEKNI
Sbjct: 386 PRPMSDVPYRPFELANGGPAENGTAEKNI 414



>Os11g0146500 SPla/RYanodine receptor SPRY domain containing protein
          Length = 420

 Score =  578 bits (1489), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 296/388 (76%), Positives = 309/388 (79%), Gaps = 6/388 (1%)

Query: 28  MSDATPSAADTPNLPDTPASASAEPETPFSXXXXXXXXXXXXXXXXXXX-XXXXTNPLGG 86
           +SDATPSAA+TPNLPDTPASAS     PFS                        TNPLGG
Sbjct: 35  ISDATPSAAETPNLPDTPASAS-----PFSDAALAADASDADASAVAAPPDDDGTNPLGG 89

Query: 87  AMKHMALXXXXXXXXXXXXXXXXXVWTRPNSRKGKKKAKQPXXXXXXXXXXXXXRLPKPS 146
           AMKHMAL                 VWTRPNSRKGKKKAKQP             RLPKPS
Sbjct: 90  AMKHMALAPPPPPNKKSKKKNSNSVWTRPNSRKGKKKAKQPANALAGGSAGANGRLPKPS 149

Query: 147 SGEDELVLTPAPRFAAERNDDAPDRPVLLSRVFKSDKVEVSDDRLTAGSTKGYRMVRATR 206
           SG+DELVLTPAPRFAAERNDDAPD PVLLSRVFKSDKVEVSDDRLTAGSTKGYRMVRATR
Sbjct: 150 SGDDELVLTPAPRFAAERNDDAPDLPVLLSRVFKSDKVEVSDDRLTAGSTKGYRMVRATR 209

Query: 207 GVAAGAWYFEVKVLHLGSTGHTRLGWATNNADIHAPVGYDVFGFGYRDMDGTKVHKAWRA 266
           GVAAGAWYFEVKVLHLGSTGHTRLGWATNNADIHAPVGYDVFGFGYRDMDGTKVHKAWRA
Sbjct: 210 GVAAGAWYFEVKVLHLGSTGHTRLGWATNNADIHAPVGYDVFGFGYRDMDGTKVHKAWRA 269

Query: 267 NYAEQGYGDGDVLGFYIHLPDGELYEPKQPFLVHYKGLPFRAEAPKAAEQKTPDPVPGSE 326
           NYA+QGYG+GDVLGFYIHLPDGELYEPKQPFLVHYKGLPFRAEAPKAAEQKTPDPVPGSE
Sbjct: 270 NYADQGYGEGDVLGFYIHLPDGELYEPKQPFLVHYKGLPFRAEAPKAAEQKTPDPVPGSE 329

Query: 327 ICYFKNGICQGTAFVDIPGGRYYPAASMYTLPDQPNCQVRXXXXXXXXXXXXXXXGRLIP 386
           ICYFKNG+CQGTAFVDIPGGRYYPAASMYTLPDQPNC+VR               GR +P
Sbjct: 330 ICYFKNGVCQGTAFVDIPGGRYYPAASMYTLPDQPNCEVRFNFGPNFEFFPEDFGGRSVP 389

Query: 387 RPMSDVPYRPFELANGGPAENGTAEKNI 414
           +PM++VPYRP++LAN  PAENGTAEK I
Sbjct: 390 QPMNNVPYRPYQLANEVPAENGTAEKTI 417



>Os11g0145500 SPla/RYanodine receptor SPRY domain containing protein
          Length = 245

 Score =  280 bits (716), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 153/215 (71%), Positives = 156/215 (72%), Gaps = 1/215 (0%)

Query: 26  TPMSDATPSAADTPNLPDTPASASAEPETPFSXXXXXXXXXXXXXXXXXXX-XXXXTNPL 84
           TPMSDATPSAADTPNLPDTPASASAEP+TPFS                         NPL
Sbjct: 26  TPMSDATPSAADTPNLPDTPASASAEPDTPFSDAALAADASDADASAVAAPPDDDGANPL 85

Query: 85  GGAMKHMALXXXXXXXXXXXXXXXXXVWTRPNSRKGKKKAKQPXXXXXXXXXXXXXRLPK 144
           GGAMKHMAL                 VWTRPNSRKGKKKAKQP             RLPK
Sbjct: 86  GGAMKHMALAPPPPPSKKSKKKNSNSVWTRPNSRKGKKKAKQPANALAGGSAGANGRLPK 145

Query: 145 PSSGEDELVLTPAPRFAAERNDDAPDRPVLLSRVFKSDKVEVSDDRLTAGSTKGYRMVRA 204
           PSSG+DELVLTPAPRFAAERNDDAPD PVLLSRVFKSDKVEVSDDRLTAGSTKGYRMVRA
Sbjct: 146 PSSGDDELVLTPAPRFAAERNDDAPDLPVLLSRVFKSDKVEVSDDRLTAGSTKGYRMVRA 205

Query: 205 TRGVAAGAWYFEVKVLHLGSTGHTRLGWATNNADI 239
           TRGVAAGAWYFEVKVLHLGSTGHTRLGWAT+   I
Sbjct: 206 TRGVAAGAWYFEVKVLHLGSTGHTRLGWATDRIRI 240



>Os11g0145600 Conserved hypothetical protein
          Length = 215

 Score =  220 bits (561), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 99/106 (93%), Positives = 104/106 (98%)

Query: 235 NNADIHAPVGYDVFGFGYRDMDGTKVHKAWRANYAEQGYGDGDVLGFYIHLPDGELYEPK 294
           N ADIHAPVGY VFGFGYRDMDGTKVHKAWR+NYA+QGYG+GDVLGFYIHLPDGELYEPK
Sbjct: 100 NYADIHAPVGYYVFGFGYRDMDGTKVHKAWRSNYADQGYGEGDVLGFYIHLPDGELYEPK 159

Query: 295 QPFLVHYKGLPFRAEAPKAAEQKTPDPVPGSEICYFKNGICQGTAF 340
           QPFLVHYKGLPFRAEAPKAAEQKTPDPVPGSEICYFKNG+CQGTA+
Sbjct: 160 QPFLVHYKGLPFRAEAPKAAEQKTPDPVPGSEICYFKNGVCQGTAY 205



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.316    0.135    0.421 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 13,658,405
Number of extensions: 591919
Number of successful extensions: 1486
Number of sequences better than 1.0e-10: 4
Number of HSP's gapped: 1480
Number of HSP's successfully gapped: 4
Length of query: 414
Length of database: 17,035,801
Length adjustment: 103
Effective length of query: 311
Effective length of database: 11,657,759
Effective search space: 3625563049
Effective search space used: 3625563049
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 157 (65.1 bits)