BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os12g0104400 Os12g0104400|AK071185
(385 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os12g0104400 Fatty acid acyl-CoA desaturase family protein 771 0.0
Os11g0104400 Similar to W-3 fatty acid desaturase (Fragment) 537 e-153
Os07g0693800 Similar to Fatty acid desaturase (Fragment) 518 e-147
Os03g0290300 Similar to W-3 fatty acid desaturase (Fragment) 432 e-121
Os02g0716500 Similar to Delta-12 fatty acid desaturase (Fra... 238 7e-63
Os07g0417200 Similar to Delta 12 oleic acid desaturase FAD2 231 5e-61
Os07g0416900 Similar to Omega-6 fatty acid desaturase, endo... 228 6e-60
>Os12g0104400 Fatty acid acyl-CoA desaturase family protein
Length = 385
Score = 771 bits (1992), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/385 (97%), Positives = 377/385 (97%)
Query: 1 MAASATQEADCKASEDARLFFDAAKPPPFRIGDVRAAIPAHCWRKTPLRSLSYVARDLLI 60
MAASATQEADCKASEDARLFFDAAKPPPFRIGDVRAAIPAHCWRKTPLRSLSYVARDLLI
Sbjct: 1 MAASATQEADCKASEDARLFFDAAKPPPFRIGDVRAAIPAHCWRKTPLRSLSYVARDLLI 60
Query: 61 VXXXXXXXXTRIDVSVAWAAWPLYWAAQGTMFWALFVLGHDCGHGSFSDSAMLNNVVGHL 120
V TRIDVSVAWAAWPLYWAAQGTMFWALFVLGHDCGHGSFSDSAMLNNVVGHL
Sbjct: 61 VAALFAAAATRIDVSVAWAAWPLYWAAQGTMFWALFVLGHDCGHGSFSDSAMLNNVVGHL 120
Query: 121 LHSFILVPYHGWRISHRTHHQNHGHIEKDESWHPITEKLYRKLETRTKKLRFTLPFPLLA 180
LHSFILVPYHGWRISHRTHHQNHGHIEKDESWHPITEKLYRKLETRTKKLRFTLPFPLLA
Sbjct: 121 LHSFILVPYHGWRISHRTHHQNHGHIEKDESWHPITEKLYRKLETRTKKLRFTLPFPLLA 180
Query: 181 FPVYLWYRSPGKTGSHFLPSSDLFSPKEKSDVIVSTTCWCIMISLLVALACVFGSVPVLM 240
FPVYLWYRSPGKTGSHFLPSSDLFSPKEKSDVIVSTTCWCIMISLLVALACVFGSVPVLM
Sbjct: 181 FPVYLWYRSPGKTGSHFLPSSDLFSPKEKSDVIVSTTCWCIMISLLVALACVFGSVPVLM 240
Query: 241 LYGVPYLVFVMWLDLVTYLHHHGHNDLPWYRGEEWSYLRGGLTTVDRDYGWINNIHHDIG 300
LYGVPYLVFVMWLDLVTYLHHHGHNDLPWYRGEEWSYLRGGLTTVDRDYGWINNIHHDIG
Sbjct: 241 LYGVPYLVFVMWLDLVTYLHHHGHNDLPWYRGEEWSYLRGGLTTVDRDYGWINNIHHDIG 300
Query: 301 THVIHHLFPQIPHYHLVEATKAARPVLGRYYREPEKSGPLPLHLFGVLLRSLRVDHFVSD 360
THVIHHLFPQIPHYHLVEATKAARPVLGRYYREPEKSGPLPLHLFGVLLRSLRVDHFVSD
Sbjct: 301 THVIHHLFPQIPHYHLVEATKAARPVLGRYYREPEKSGPLPLHLFGVLLRSLRVDHFVSD 360
Query: 361 VGDVVYYQTDHSLNGTDWAEDAKHK 385
VGDVVYYQTDHSLNGTDWAEDAKHK
Sbjct: 361 VGDVVYYQTDHSLNGTDWAEDAKHK 385
>Os11g0104400 Similar to W-3 fatty acid desaturase (Fragment)
Length = 269
Score = 537 bits (1383), Expect = e-153, Method: Compositional matrix adjust.
Identities = 264/272 (97%), Positives = 266/272 (97%), Gaps = 3/272 (1%)
Query: 114 NNVVGHLLHSFILVPYHGWRISHRTHHQNHGHIEKDESWHPITEKLYRKLETRTKKLRFT 173
NNVVGHLLHSFILVPYHGWRISHRTHHQNHGHIE+DESWHPITEKLY +LETRTKKLRFT
Sbjct: 1 NNVVGHLLHSFILVPYHGWRISHRTHHQNHGHIERDESWHPITEKLYWQLETRTKKLRFT 60
Query: 174 LPFPLLAFPVYLWYRSPGKTGSHFLPSSDLFSPKEKSDVIVSTTCWCIMISLLVALACVF 233
LPF LLAFP WYRSPGKTGSHFLPSSDLFSPKEKSDVIVSTTCWCIMISLLVALACVF
Sbjct: 61 LPFTLLAFP---WYRSPGKTGSHFLPSSDLFSPKEKSDVIVSTTCWCIMISLLVALACVF 117
Query: 234 GSVPVLMLYGVPYLVFVMWLDLVTYLHHHGHNDLPWYRGEEWSYLRGGLTTVDRDYGWIN 293
G VPVLMLYGVPYLVFVMWLDLVTYLHHHGHNDLPWYRGEEWSYLRGGLTTVDRDYGWIN
Sbjct: 118 GPVPVLMLYGVPYLVFVMWLDLVTYLHHHGHNDLPWYRGEEWSYLRGGLTTVDRDYGWIN 177
Query: 294 NIHHDIGTHVIHHLFPQIPHYHLVEATKAARPVLGRYYREPEKSGPLPLHLFGVLLRSLR 353
NIHHDIGTHVIHHLFPQIPHYHLVEATKAARPVLGRYYREPEKSGPLPLHLFGVLLRSLR
Sbjct: 178 NIHHDIGTHVIHHLFPQIPHYHLVEATKAARPVLGRYYREPEKSGPLPLHLFGVLLRSLR 237
Query: 354 VDHFVSDVGDVVYYQTDHSLNGTDWAEDAKHK 385
VDHFVSDVGDVVYYQTDHSLNGTDWAEDAKHK
Sbjct: 238 VDHFVSDVGDVVYYQTDHSLNGTDWAEDAKHK 269
>Os07g0693800 Similar to Fatty acid desaturase (Fragment)
Length = 413
Score = 518 bits (1334), Expect = e-147, Method: Compositional matrix adjust.
Identities = 247/351 (70%), Positives = 288/351 (82%), Gaps = 5/351 (1%)
Query: 21 FDAAKPPPFRIGDVRAAIPAHCWRKTPLRSLSYVARDLLIVXXXXXXXXTRIDVSVAWAA 80
FD PPF + D+RAAIP HCW K P RS+ YV RD+++V R+ +AW
Sbjct: 64 FDPGAAPPFGLADIRAAIPKHCWVKDPWRSMGYVLRDVVVVFALAAAA-ARLHSCLAW-- 120
Query: 81 WPLYWAAQGTMFWALFVLGHDCGHGSFSDSAMLNNVVGHLLHSFILVPYHGWRISHRTHH 140
PLYWAAQGTMFWALFVLGHDCGHGSFS+++ LN+V+GH+LHS ILVPYHGWRISHRTHH
Sbjct: 121 -PLYWAAQGTMFWALFVLGHDCGHGSFSNNSRLNSVMGHILHSSILVPYHGWRISHRTHH 179
Query: 141 QNHGHIEKDESWHPITEKLYRKLETRTKKLRFTLPFPLLAFPVYLWYRSPGKTGSHFLPS 200
QNHGH++KDESWHP+ E+LYR L T+ LRF++PFP+LA+P YLW RSPGK+GSHF PS
Sbjct: 180 QNHGHVDKDESWHPLPERLYRSLNRATRMLRFSIPFPMLAYPFYLWSRSPGKSGSHFHPS 239
Query: 201 SDLFSPKEKSDVIVSTTCWCIMISLLVALACVFGSVPVLMLYGVPYLVFVMWLDLVTYLH 260
SDLF P E++DV+ ST CW M +LL L + G + +L LY VPY +FVMWLD VTYLH
Sbjct: 240 SDLFQPNERNDVLTSTACWVAMAALLAGLTFLMGPLLMLNLYFVPYWIFVMWLDFVTYLH 299
Query: 261 HHGHND-LPWYRGEEWSYLRGGLTTVDRDYGWINNIHHDIGTHVIHHLFPQIPHYHLVEA 319
HHGHND LPWYRG+EWSYLRGGLTTVDRDYGWINNIHHDIGTHVIHHLFPQIPHYHL+EA
Sbjct: 300 HHGHNDKLPWYRGKEWSYLRGGLTTVDRDYGWINNIHHDIGTHVIHHLFPQIPHYHLIEA 359
Query: 320 TKAARPVLGRYYREPEKSGPLPLHLFGVLLRSLRVDHFVSDVGDVVYYQTD 370
T+AA+ V+G+YYREP+KSGP PLHLFG L RSL+ DH+VSD GDVVYYQTD
Sbjct: 360 TEAAKGVMGKYYREPDKSGPFPLHLFGALSRSLKRDHYVSDTGDVVYYQTD 410
>Os03g0290300 Similar to W-3 fatty acid desaturase (Fragment)
Length = 276
Score = 432 bits (1110), Expect = e-121, Method: Compositional matrix adjust.
Identities = 200/276 (72%), Positives = 230/276 (83%), Gaps = 1/276 (0%)
Query: 107 FSDSAMLNNVVGHLLHSFILVPYHGWRISHRTHHQNHGHIEKDESWHPITEKLYRKLETR 166
FS +A LN+VVGH+LHS ILVPYHGWRISHRTHHQNHGH+EKDESW P++E+LY L+
Sbjct: 1 FSSNAKLNSVVGHILHSSILVPYHGWRISHRTHHQNHGHVEKDESWQPLSERLYNSLDYM 60
Query: 167 TKKLRFTLPFPLLAFPVYLWYRSPGKTGSHFLPSSDLFSPKEKSDVIVSTTCWCIMISLL 226
TKKLRFT+PFP+LAFP+YL+ RSPGK GSHF PSSDLF P EK DVI ST W M+ +L
Sbjct: 61 TKKLRFTMPFPMLAFPLYLFARSPGKKGSHFNPSSDLFQPNEKKDVITSTASWLAMVGIL 120
Query: 227 VALACVFGSVPVLMLYGVPYLVFVMWLDLVTYLHHHGHND-LPWYRGEEWSYLRGGLTTV 285
L V G + +L LY VPY++FVMWLD VTYLHHHGH D LPWYRG+EWSYLRGGLTT+
Sbjct: 121 AGLTFVMGPLKMLKLYAVPYVIFVMWLDFVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTL 180
Query: 286 DRDYGWINNIHHDIGTHVIHHLFPQIPHYHLVEATKAARPVLGRYYREPEKSGPLPLHLF 345
DRDYGWINN+HHDIGTHVIHHLFPQIPHYHLVEAT+AA+PVLG+YY+EPEKS PLP HL
Sbjct: 181 DRDYGWINNVHHDIGTHVIHHLFPQIPHYHLVEATEAAKPVLGKYYKEPEKSAPLPFHLL 240
Query: 346 GVLLRSLRVDHFVSDVGDVVYYQTDHSLNGTDWAED 381
GVL +SL DH+VSD GDVVYYQTD + + + D
Sbjct: 241 GVLAKSLNSDHYVSDTGDVVYYQTDLKTSSSAQSSD 276
>Os02g0716500 Similar to Delta-12 fatty acid desaturase (Fragment)
Length = 388
Score = 238 bits (606), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 135/342 (39%), Positives = 193/342 (56%), Gaps = 20/342 (5%)
Query: 7 QEADCKASEDARLFFDAAKPPPFRIGDVRAAIPAHCWRKTPLRSLSYVARDLLIVXXXXX 66
Q+ +A A + PPF +G ++ AIP HC++++ ++S SYV DL+IV
Sbjct: 16 QKLLGRAGNGAAVQRSPTDKPPFTLGQIKKAIPPHCFQRSVIKSFSYVVHDLVIVAALLY 75
Query: 67 XXXTRIDV---SVAWAAWPLYWAAQGTMFWALFVLGHDCGHGSFSDSAMLNNVVGHLLHS 123
I V + +AAWPLYW AQG + ++V+ H+CGH +FSD ++L+++VG +LHS
Sbjct: 76 FALVMIPVLPSGMEFAAWPLYWIAQGCVLTGVWVIAHECGHHAFSDYSVLDDIVGLVLHS 135
Query: 124 FILVPYHGWRISHRTHHQNHGHIEKDESWHP--------ITEKLYRKLETRTKKLRFTLP 175
+LVPY W+ SHR HH N G +E+DE + P T +Y R + L
Sbjct: 136 SLLVPYFSWKYSHRRHHSNTGSLERDEVFVPKQKSAMAWYTPYVYHNPIGRLVHIFVQL- 194
Query: 176 FPLLAFPVYLWYRSPGKT----GSHFLPSSDLFSPKEKSDVIVSTTCWCIMISLLVALAC 231
L +P+YL + G+ HF P +++ +E+ + +S L L+
Sbjct: 195 --TLGWPLYLAFNVSGRPYPRFACHFDPYGPIYNDRERVQIFISDVGVVSAGLALFKLSS 252
Query: 232 VFGSVPVLMLYGVPYLVFVMWLDLVTYLHHHGHNDLPWYRGEEWSYLRGGLTTVDRDYGW 291
FG V+ +YGVP L+ WL L+TYL H H LP Y EW +LRG L TVDRDYG
Sbjct: 253 AFGFWWVVRVYGVPLLIVNAWLVLITYL-QHTHPALPHYDSSEWDWLRGALATVDRDYGI 311
Query: 292 INNIHHDI-GTHVIHHLFPQIPHYHLVEATKAARPVLGRYYR 332
+N + H+I THV HHLF +PHYH +EATKA RP+LG YY+
Sbjct: 312 LNKVFHNITDTHVAHHLFSTMPHYHAMEATKAIRPILGEYYQ 353
>Os07g0417200 Similar to Delta 12 oleic acid desaturase FAD2
Length = 382
Score = 231 bits (590), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 134/347 (38%), Positives = 193/347 (55%), Gaps = 39/347 (11%)
Query: 12 KASEDARLFFDAAKPPPFRIGDVRAAIPAHCWRKTPLRSLSYVARDLLIVXXXXXXXXTR 71
++ A + PPF +GD++ AIP HC+ ++ ++S SY+ DL I
Sbjct: 14 RSGSSAAMQRSPVDKPPFTLGDIKKAIPPHCFHRSVIKSFSYLLHDLAIAAGLLYFALVG 73
Query: 72 IDV---SVAWAAWPLYWAAQGTMFWALFVLGHDCGHGSFSDSAMLNNVVGHLLHSFILVP 128
I + AWPLYWAAQG++ ++V+GH+CGH +FSD +L+N+VG +LHS +L P
Sbjct: 74 IPALPSILRLVAWPLYWAAQGSVLTGVWVIGHECGHHAFSDYLLLDNLVGLVLHSALLTP 133
Query: 129 YHGWRISHRTHHQNHGHIEKDESW-----------------HPITEKLYRKLETRTKKLR 171
+ W+ SHR HH N G +EKDE + +P+ +Y L+
Sbjct: 134 FFSWKYSHRRHHANTGSMEKDEVYVAKKKSALPWYTPYVFGNPVGRLVYIALQLT----- 188
Query: 172 FTLPFPLLAFPVYLWYRSPGK-----TGSHFLPSSDLFSPKEKSDVIVSTTCWCIMISLL 226
LA+P+YL + G+ H+ P S LFS +E+ V+VS ++ L
Sbjct: 189 -------LAWPLYLAFNLSGQPYPRLVTCHYDPYSPLFSDQERVQVLVSDAAILAVLLAL 241
Query: 227 VALACVFGSVPVLMLYGVPYLVFVMWLDLVTYLHHHGHNDLPWYRGEEWSYLRGGLTTVD 286
L +G V+ +YGVP ++ L+TYL HH H LP Y EW +LRG L TVD
Sbjct: 242 HRLTAAYGLWWVVRVYGVPVMIVGALFVLITYL-HHTHRALPHYDSSEWEWLRGSLATVD 300
Query: 287 RDYGWINNIHHDI-GTHVIHHLFPQIPHYHLVEATKAARPVLGRYYR 332
RDYG +N + H++ THV+HHLFP +PHYH +EAT+AARPVLG YY+
Sbjct: 301 RDYGVLNRVLHNVTDTHVLHHLFPSMPHYHAMEATRAARPVLGEYYK 347
>Os07g0416900 Similar to Omega-6 fatty acid desaturase, endoplasmic reticulum
isozyme 2 (EC 1.14.19.-)
Length = 390
Score = 228 bits (581), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 131/340 (38%), Positives = 188/340 (55%), Gaps = 16/340 (4%)
Query: 8 EADCKASEDARLFFDAAKPPPFRIGDVRAAIPAHCWRKTPLRSLSYVARDLLIVXXXXXX 67
EA +A A + PPF +GD+R AIP HC+ ++ ++S SY+ DL I
Sbjct: 17 EAPRRAGSHAAVKRSPVDKPPFTLGDIRKAIPPHCFHRSVIKSFSYLLHDLAIAAGLLYF 76
Query: 68 XXTRIDV---SVAWAAWPLYWAAQGTMFWALFVLGHDCGHGSFSDSAMLNNVVGHLLHSF 124
I + AWP YWAAQG + ++++ H+CGH +FS A+L++ +G +LHS+
Sbjct: 77 ALVVIPALPGVLRLVAWPFYWAAQGCFLFGVWIIAHECGHHAFSGHALLDDTLGLVLHSW 136
Query: 125 ILVPYHGWRISHRTHHQNHGHIEKDESWHPITEK-------LYRKLETRTKKLRFTLPFP 177
+L PY W+ +H+ HH N E+DE + P + K +L +
Sbjct: 137 LLAPYFSWKYTHQRHHSNTSSQERDEVFVPRFKSDLPWYSPYVYKYNNPVARLLLLVVQL 196
Query: 178 LLAFPVYL----WYRSPGKTGSHFLPSSDLFSPKEKSDVIVSTTCWCIMISLLVALACVF 233
+ +P+YL W R + SHF PS ++ +E+ + +S + L LA +
Sbjct: 197 TVGWPMYLVFNTWGRQYPRFASHFDPSGPIYKGRERVFIAISDIGMLAVSLALYRLAEGY 256
Query: 234 GSVPVLMLYGVPYLVFVMWLDLVTYLHHHGHNDLPWYRGEEWSYLRGGLTTVDRDYGWIN 293
G V+ +YGVP LV WL +VTYL HH H +P Y EW +LRG L TVDRDY ++N
Sbjct: 257 GFWWVVRVYGVPLLVVNAWLVVVTYL-HHTHRAIPHYDSSEWDWLRGALATVDRDYSFLN 315
Query: 294 NIHHDI-GTHVIHHLFPQIPHYHLVEATKAARPVLGRYYR 332
+ H+I THV+HHLFP IPHYH VEATKA RP+LG YY+
Sbjct: 316 RVFHNITDTHVVHHLFPTIPHYHAVEATKAIRPILGEYYQ 355
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.325 0.140 0.474
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 14,602,396
Number of extensions: 633656
Number of successful extensions: 1852
Number of sequences better than 1.0e-10: 7
Number of HSP's gapped: 1837
Number of HSP's successfully gapped: 7
Length of query: 385
Length of database: 17,035,801
Length adjustment: 103
Effective length of query: 282
Effective length of database: 11,657,759
Effective search space: 3287488038
Effective search space used: 3287488038
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 157 (65.1 bits)