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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os07g0416900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Omega-6 fatty acid desaturase, endoplasmic reticulum isozyme 2 (EC 1.14.19.-).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 2.97 (0.046) R2 : 0.00482
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.144 (0.0969) R2dN8 : 0.00623 R2N8 : 0.00482
σ : 0.867
deviance : 345.13
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
311.06 0.829 2.9 1.03 0.269 -0.996 1.13 0.454 0.421 22 9.707 1506 -- --
311.24 0.822 2.92 0.941 0.269 -0.991 1.12 -- 0.396 22 8.73 1538 -- --
315.93 0.828 2.91 0.978 0.278 -0.982 -- 0.478 0.411 22.7 9.742 1453 -- --
316.11 0.828 2.92 0.88 0.265 -0.985 -- -- 0.388 22.7 9.902 1503 -- --
320.23 0.833 2.9 0.986 -- -0.974 -- 0.468 0.415 -- 11.32 1518 -- --
328.12 0.849 2.96 0.609 0.256 -- 1.11 -- 0.21 21.8 -- -- -- --
332.76 0.854 2.96 0.566 0.25 -- -- -- 0.207 22.2 -- -- -- --
320.4 0.834 2.91 0.883 -- -0.974 -- -- 0.387 -- 12.16 1538 -- --
333.79 0.851 2.95 -- 0.267 -0.613 -- -- 0.235 22.8 5.317 1464 -- --
336.57 0.857 2.95 0.57 -- -- -- -- 0.207 -- -- -- -- --
341.2 0.864 2.97 -- 0.254 -- -- -- 0.144 22.4 -- -- -- --
337.98 0.859 2.95 -- -- -0.683 -- -- 0.221 -- 12.16 1538 -- --
345.13 0.867 2.97 -- -- -- -- -- 0.144 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 308.00 wind 9.0 43200 > th dose independent rect. 20 11
2 308.03 wind 1.0 10 < th dose independent rect. 3 1
4 308.07 wind 9.0 43200 < th dose independent rect. 20 11
6 308.14 wind 7.0 43200 > th dose dependent rect. 20 12
7 308.27 temperature 10.0 1440 > th dose dependent rect. 7 3
13 308.34 temperature 30.0 1440 < th dose dependent rect. 7 2
28 308.54 wind 5.0 43200 > th dose dependent rect. 6 1
39 308.73 temperature 10.0 1440 > th dose dependent rect. 6 8
41 308.74 humidity 80.0 14400 > th dose dependent rect. 20 9
120 309.21 radiation 1.0 43200 < th dose dependent rect. 21 3
151 309.35 wind 7.0 43200 > th dose dependent rect. 20 5
164 309.39 humidity 80.0 14400 > th dose dependent rect. 22 1
182 309.46 temperature 10.0 1440 > th dose dependent sin 3 NA
191 309.49 temperature 25.0 30 < th dose dependent rect. 8 11
223 309.59 wind 7.0 43200 > th dose dependent sin 10 NA
227 309.60 wind 9.0 43200 < th dose independent sin 10 NA
244 309.64 wind 7.0 43200 > th dose independent rect. 20 5
245 309.64 wind 9.0 43200 < th dose independent rect. 20 5
276 309.74 wind 5.0 43200 > th dose independent rect. 6 1
319 309.83 precipitation 0.1 10 > th dose independent rect. 7 13
326 309.83 precipitation 0.1 10 > th dose dependent rect. 7 13
350 309.87 wind 9.0 43200 > th dose independent sin 10 NA
357 309.87 temperature 15.0 720 > th dose dependent rect. 21 20
434 310.10 wind 7.0 43200 < th dose independent rect. 6 1
532 310.28 humidity 50.0 14400 > th dose dependent rect. 22 1
557 310.33 temperature 10.0 720 > th dose dependent rect. 18 22
558 310.34 wind 1.0 10 < th dose dependent rect. 3 1
587 310.40 temperature 25.0 4320 < th dose dependent rect. 13 1
592 310.42 wind 1.0 43200 < th dose dependent rect. 19 2
608 310.45 temperature 30.0 1440 < th dose dependent sin 4 NA
634 310.52 radiation 10.0 14400 < th dose independent rect. 17 1
721 310.68 humidity 80.0 14400 > th dose dependent sin 11 NA
727 310.69 humidity 50.0 14400 > th dose dependent rect. 21 7
732 310.70 wind 5.0 43200 > th dose dependent rect. 4 6
757 310.75 radiation 10.0 14400 < th dose independent rect. 17 5
758 310.75 radiation 10.0 14400 < th dose independent rect. 17 7
783 310.78 temperature 10.0 720 > th dose dependent rect. 4 20
794 310.80 radiation 10.0 14400 < th dose independent rect. 17 3
804 310.82 radiation 10.0 14400 < th dose independent rect. 17 12
839 310.86 temperature 10.0 1440 > th dose dependent rect. 13 1
852 310.87 temperature 30.0 720 < th dose dependent rect. 24 18
980 311.03 temperature 10.0 30 > th dose dependent rect. 21 23