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Os07g0693800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Fatty acid desaturase (Fragment).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.2 (0.0461) R2 : 0.893
β1 : -3.41 (0.185) R2dD : 0.108 R2D : 0.0826
β2 : 3.56 (0.171) R2dC : 0.257 R2C : 0.478
β3 : -3.58 (0.245) R2dE : 0.128 R2E : 0.415
β4 : 4.84 (0.623) R2dD*C : 0.0302 R2D*C : -0.00729
β5 : 7.17 (1.2) R2dD*E : 0.0198 R2D*E : -0.0386
γ1 : -1.9 (0.1) R2dN8 : 0.126 R2N8 : 0.0836
σ : 0.838
deviance : 318.43
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C
peak time of C : 2.07
E
wheather : temperature
threshold : 18.55
memory length : 237
response mode : > th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 5.02
open length of G : 9.62

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
318.43 0.838 11.2 -3.41 3.56 -3.58 4.84 7.17 -1.9 2.07 18.55 237 5.02 9.62
349.68 0.871 11.3 -3.69 3.05 -3.76 3.03 -- -1.97 1.84 16.74 236 5.88 9.18
355.58 0.878 11.3 -3.96 2.76 -3.89 -- -0.614 -2.05 2.23 14.58 251 5.14 9.88
355.08 0.878 11.2 -3.94 2.75 -4.08 -- -- -2.06 2.37 15 252 5.05 9.83
383.68 0.912 11.3 -3.85 -- -6.06 -- 0.47 -2.07 -- 1.021 352 5.15 10.1
462.85 1.01 11.3 -4.27 5.37 -- 2.82 -- -2.32 1.59 -- -- -- --
494.57 1.04 11.3 -4.36 5.37 -- -- -- -2.34 1.57 -- -- -- --
370.98 0.897 11.2 -3.9 -- -6.36 -- -- -2.09 -- 4.237 372 4.83 10.1
753.06 1.28 11.1 -- 2.66 -4.69 -- -- -1.51 2.3 18.03 249 4.58 10.5
2259.98 2.22 11.3 -4.15 -- -- -- -- -2.22 -- -- -- -- --
996 1.48 11.2 -- 5.29 -- -- -- -1.85 1.55 -- -- -- --
745.42 1.27 11.1 -- -- -7.24 -- -- -1.52 -- 11.26 400 4.35 10.3
2713.41 2.43 11.2 -- -- -- -- -- -1.76 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 321.81 temperature 20 270 > th dose dependent rect. 5 9
22 337.50 temperature 25 270 > th dose independent rect. 6 8
26 339.15 temperature 30 10 < th dose dependent sin 0 NA
32 340.94 temperature 20 90 > th dose dependent sin 2 NA
36 341.18 temperature 20 10 > th dose dependent sin 1 NA
50 343.24 temperature 30 10 < th dose dependent rect. 4 16
68 344.90 temperature 30 90 < th dose dependent rect. 3 17
198 350.79 temperature 25 90 > th dose dependent rect. 20 19
244 352.50 temperature 25 270 > th dose dependent sin 6 NA
291 354.55 temperature 30 10 < th dose dependent rect. 6 14
385 358.68 temperature 30 30 < th dose dependent rect. 2 21
388 358.82 temperature 30 90 < th dose dependent rect. 7 13
441 360.69 temperature 25 90 > th dose independent sin 1 NA
561 365.06 temperature 25 10 > th dose dependent rect. 6 16
624 366.49 temperature 25 90 < th dose independent sin 0 NA
674 367.66 temperature 25 10 > th dose dependent rect. 23 23
693 367.92 temperature 30 10 < th dose dependent rect. 4 12
713 368.42 temperature 30 90 < th dose dependent rect. 9 11
726 368.54 temperature 25 10 > th dose dependent no NA NA
729 368.61 temperature 25 270 < th dose independent rect. 2 16
737 368.80 temperature 30 10 < th dose dependent rect. 2 12
847 370.80 temperature 25 720 < th dose independent rect. 7 5
888 371.44 temperature 25 90 < th dose independent rect. 5 15
940 372.28 temperature 25 10 > th dose dependent rect. 9 23
968 372.97 temperature 15 720 > th dose dependent rect. 3 5
969 372.99 temperature 30 10 < th dose dependent rect. 4 10