BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os11g0546100 Os11g0546100|AK068611
(514 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os11g0546100 Lung seven transmembrane receptor family protein 940 0.0
Os09g0439700 Lung seven transmembrane receptor family protein 529 e-150
Os03g0334800 Lung seven transmembrane receptor family protein 528 e-150
Os07g0614600 Lung seven transmembrane receptor family protein 67 4e-11
>Os11g0546100 Lung seven transmembrane receptor family protein
Length = 514
Score = 940 bits (2429), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 465/489 (95%), Positives = 465/489 (95%)
Query: 26 EASIHTYDREPFREVGNAFLLSGGSEGVVADGADLAAPASSFIKFTNVTFWRTPESAESH 85
EASIHTYDREPFREVGNAFLLSGGSEGVVADGADLAAPASSFIKFTNVTFWRTPESAESH
Sbjct: 26 EASIHTYDREPFREVGNAFLLSGGSEGVVADGADLAAPASSFIKFTNVTFWRTPESAESH 85
Query: 86 AKMAHSTGLVQAILFEAADRDNIGGSAYGGQRSICCTPDLAKLEGCKQGEVIRRPSSDDP 145
AKMAHSTGLVQAILFEAADRDNIGGSAYGGQRSICCTPDLAKLEGCKQGEVIRRPSSDDP
Sbjct: 86 AKMAHSTGLVQAILFEAADRDNIGGSAYGGQRSICCTPDLAKLEGCKQGEVIRRPSSDDP 145
Query: 146 DWPYVLDTHFSGSHLSVKLEDEVVRITKTGMYNLFFISCDPKLRGLSMSGKTVWRNPGGY 205
DWPYVLDTHFSGSHLSVKLEDEVVRITKTGMYNLFFISCDPKLRGLSMSGKTVWRNPGGY
Sbjct: 146 DWPYVLDTHFSGSHLSVKLEDEVVRITKTGMYNLFFISCDPKLRGLSMSGKTVWRNPGGY 205
Query: 206 LPGRMAPLMKFYVFMSLAYLLVMVVWSSQYIRFWRDIMPIQNWITLIIALGLFEMTLWYF 265
LPGRMAPLMKFYVFMSLAYLLVMVVWSSQYIRFWRDIMPIQNWITLIIALGLFEMTLWYF
Sbjct: 206 LPGRMAPLMKFYVFMSLAYLLVMVVWSSQYIRFWRDIMPIQNWITLIIALGLFEMTLWYF 265
Query: 266 EYLNFNSSGVRPIGITTWVVTVGAIRKTISRLLILSISMGYGVVRPTLGGLTSKVLLLGL 325
EYLNFNSSGVRPIGITTWVVTVGAIRKTISRLLILSISMGYGVVRPTLGGLTSKVLLLGL
Sbjct: 266 EYLNFNSSGVRPIGITTWVVTVGAIRKTISRLLILSISMGYGVVRPTLGGLTSKVLLLGL 325
Query: 326 TYFLASELLDIAENVGTINDISGKARLFLVLPDAFLDAFLILWIFTSLSRTLEKLQARRS 385
TYFLASELLDIAENVGTINDISGKARLFLVLPDAFLDAFLILWIFTSLSRTLEKLQARRS
Sbjct: 326 TYFLASELLDIAENVGTINDISGKARLFLVLPDAFLDAFLILWIFTSLSRTLEKLQARRS 385
Query: 386 SVKLDIYRKFTNALAVSVIASVAWIGYEVYFKATDPFSERWQSAWIITAFWDVLAFVLLL 445
SVKLDIYRKFTNALAVSVIASVAWIGYEVYFKATDPFSERWQSAWIITAFWDVLAFVLLL
Sbjct: 386 SVKLDIYRKFTNALAVSVIASVAWIGYEVYFKATDPFSERWQSAWIITAFWDVLAFVLLL 445
Query: 446 VICYLWAPSQSSQRYAYSGXXXXXXXXXSQSLTXXXXXXXXXXXXXXXRSGGVSSAFSLE 505
VICYLWAPSQSSQRYAYSG SQSLT RSGGVSSAFSLE
Sbjct: 446 VICYLWAPSQSSQRYAYSGEAADDDDEESQSLTKGTDGDVGMVKVDKDRSGGVSSAFSLE 505
Query: 506 DEAEEDKRE 514
DEAEEDKRE
Sbjct: 506 DEAEEDKRE 514
>Os09g0439700 Lung seven transmembrane receptor family protein
Length = 532
Score = 529 bits (1363), Expect = e-150, Method: Compositional matrix adjust.
Identities = 252/454 (55%), Positives = 331/454 (72%), Gaps = 26/454 (5%)
Query: 26 EASIHTYDREPFREVGNAFLLSGGSEGVVADGADLAAPASS-----------------FI 68
EAS+H Y F GNAF+L GSEG+ A ++PA++ FI
Sbjct: 33 EASVHEYRGLGFLNKGNAFILHAGSEGLYAP----SSPANATTAEDDEDAAAAAVADAFI 88
Query: 69 KFTNVTFWRTPESAESHAKMAHSTGLVQAILFEAADRDNIGGSAYGGQRSICCTPDLAKL 128
+F +TF R ++A+ + +VQ ++FE DR+ IGGSAYGGQ++ICCT DLAKL
Sbjct: 89 RFDKITFRRPKDAAKETG-----SAMVQILVFEIEDREMIGGSAYGGQKAICCTSDLAKL 143
Query: 129 EGCKQGEVIRRPSSDDPDWPYVLDTHFSGSHLSVKLEDEVVRITKTGMYNLFFISCDPKL 188
C +G VI RPS +P WP +L + F GS L ++ ITKTGMYN++FI CDP L
Sbjct: 144 GACTEGSVIYRPSQVNPGWPQLLFSSFDGSDTIATLPSRIIPITKTGMYNMYFIHCDPSL 203
Query: 189 RGLSMSGKTVWRNPGGYLPGRMAPLMKFYVFMSLAYLLVMVVWSSQYIRFWRDIMPIQNW 248
GL + G+TVW+NP GYLPGRMAPL F+ MS A++++ + W QY++FWR+++P+QN
Sbjct: 204 AGLEIEGQTVWKNPTGYLPGRMAPLKNFFGIMSFAFVVLGIYWFYQYMKFWREVLPLQNC 263
Query: 249 ITLIIALGLFEMTLWYFEYLNFNSSGVRPIGITTWVVTVGAIRKTISRLLILSISMGYGV 308
ITL+I LG+ EM+LWYFEY FN +GVRP GIT W VT G +++T++R++IL +SMGYGV
Sbjct: 264 ITLVITLGMLEMSLWYFEYAEFNETGVRPKGITFWAVTFGTVKRTVARVIILIVSMGYGV 323
Query: 309 VRPTLGGLTSKVLLLGLTYFLASELLDIAENVGTINDISGKARLFLVLPDAFLDAFLILW 368
VRP+LGGLTSKV++LG T+FLA+E+L++ EN+G +ND+SGKARLFLV P A LDA ++W
Sbjct: 324 VRPSLGGLTSKVVMLGGTFFLATEILELVENLGAVNDLSGKARLFLVYPVAILDAAFVVW 383
Query: 369 IFTSLSRTLEKLQARRSSVKLDIYRKFTNALAVSVIASVAWIGYEVYFKATDPFSERWQS 428
IF SL++TL+KLQARRS KLDIYRKFT ALAV+V+ S+ WIGYE+YFK+TD F+ERWQ
Sbjct: 384 IFISLAKTLDKLQARRSMAKLDIYRKFTIALAVTVLVSIGWIGYEIYFKSTDVFNERWQY 443
Query: 429 AWIITAFWDVLAFVLLLVICYLWAPSQSSQRYAY 462
AWII AFW VL+F LL VI YLWAPSQ+S R+ Y
Sbjct: 444 AWIIPAFWHVLSFSLLCVISYLWAPSQNSMRFTY 477
>Os03g0334800 Lung seven transmembrane receptor family protein
Length = 494
Score = 528 bits (1361), Expect = e-150, Method: Compositional matrix adjust.
Identities = 255/436 (58%), Positives = 324/436 (74%), Gaps = 2/436 (0%)
Query: 28 SIHTYDREPFREVGNAFLLSGGSEGVVADGADLAAPASSFIKFTNVTFWRTPESAESHAK 87
S+H Y F N+F GGSEG+ A + ++SFI+F +VTF RT ESA H
Sbjct: 24 SVHEYSGGGFAPRANSFFFHGGSEGLYASDPT-SNSSASFIRFDSVTFRRTQESAGRHEA 82
Query: 88 MAHSTGLVQAILFEAADRDNIGGSAYGGQRSICCTPDLAKLEGCKQGEVIRRPSSDDPDW 147
M TGLV+AI+ E DR IGGS Y +ICCTP+L K + CK GEVI +P+ D+PDW
Sbjct: 83 MQQKTGLVEAIIVEIQDRSKIGGS-YLHSDAICCTPELDKEKSCKVGEVIIQPNPDNPDW 141
Query: 148 PYVLDTHFSGSHLSVKLEDEVVRITKTGMYNLFFISCDPKLRGLSMSGKTVWRNPGGYLP 207
P + T FSG + +VV I KTGMY L+F+ CDP+L+GL ++G+TVWRNP GYLP
Sbjct: 142 PKRVQTFFSGRDEEASMVTQVVSINKTGMYYLYFMFCDPQLKGLKITGRTVWRNPQGYLP 201
Query: 208 GRMAPLMKFYVFMSLAYLLVMVVWSSQYIRFWRDIMPIQNWITLIIALGLFEMTLWYFEY 267
G+MAP+M FY FMSLAYL++ ++W Q++R W+DI+ + IT +IALG+ EM WYFEY
Sbjct: 202 GKMAPMMTFYGFMSLAYLVLGLLWFLQFVRCWKDILQLHYHITAVIALGMCEMAFWYFEY 261
Query: 268 LNFNSSGVRPIGITTWVVTVGAIRKTISRLLILSISMGYGVVRPTLGGLTSKVLLLGLTY 327
NFNS+G RP+ IT W VT A++KTISRLL+L +SMGYGVVRPTLGG+TSKV LG+ Y
Sbjct: 262 ANFNSTGNRPMAITLWAVTFTAVKKTISRLLLLVVSMGYGVVRPTLGGVTSKVGALGVVY 321
Query: 328 FLASELLDIAENVGTINDISGKARLFLVLPDAFLDAFLILWIFTSLSRTLEKLQARRSSV 387
F+ASE L++ EN+G IND SGK RLFLVLP A LDA I+WIF+SLSRTLEKLQ RRS
Sbjct: 322 FIASEGLELVENLGNINDFSGKTRLFLVLPVAILDATFIIWIFSSLSRTLEKLQLRRSMA 381
Query: 388 KLDIYRKFTNALAVSVIASVAWIGYEVYFKATDPFSERWQSAWIITAFWDVLAFVLLLVI 447
KL++YRKFTN+LA+SV+ S+AWIGYE+YF ATDP SE W+ AWII AFW+VL++VLL +I
Sbjct: 382 KLELYRKFTNSLALSVLISIAWIGYELYFNATDPLSELWRRAWIIPAFWNVLSYVLLAII 441
Query: 448 CYLWAPSQSSQRYAYS 463
C LW+PS++ +AYS
Sbjct: 442 CILWSPSRNPTGFAYS 457
>Os07g0614600 Lung seven transmembrane receptor family protein
Length = 74
Score = 66.6 bits (161), Expect = 4e-11, Method: Composition-based stats.
Identities = 27/51 (52%), Positives = 37/51 (72%)
Query: 410 IGYEVYFKATDPFSERWQSAWIITAFWDVLAFVLLLVICYLWAPSQSSQRY 460
I +V+FK TD +ERW+ AW+I A W++++F LL IC LW PSQ+S RY
Sbjct: 8 IKIQVHFKTTDEHNERWRVAWVIPAVWELISFFLLCTICILWTPSQNSMRY 58
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.323 0.137 0.421
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 15,560,610
Number of extensions: 603559
Number of successful extensions: 1118
Number of sequences better than 1.0e-10: 4
Number of HSP's gapped: 1113
Number of HSP's successfully gapped: 4
Length of query: 514
Length of database: 17,035,801
Length adjustment: 105
Effective length of query: 409
Effective length of database: 11,553,331
Effective search space: 4725312379
Effective search space used: 4725312379
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 158 (65.5 bits)