Os07g0614600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Lung seven transmembrane receptor family protein.
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Os07g0614600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Lung seven transmembrane receptor family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 146.88 | 0.569 | 11.8 | 2.84 | 0.61 | 1.8 | -1.15 | -0.166 | 1.48 | 19 | 20.9 | 5176 | -- | -- |
| 146.9 | 0.565 | 11.8 | 2.88 | 0.615 | 1.82 | -1.13 | -- | 1.49 | 19.1 | 20.87 | 5117 | -- | -- |
| 150.29 | 0.571 | 11.8 | 2.86 | 0.61 | 1.79 | -- | -0.211 | 1.48 | 18.9 | 20.9 | 5143 | -- | -- |
| 150.35 | 0.571 | 11.8 | 2.92 | 0.608 | 1.8 | -- | -- | 1.49 | 18.9 | 20.87 | 5117 | -- | -- |
| 169.56 | 0.606 | 11.8 | 2.86 | -- | 1.81 | -- | -0.172 | 1.46 | -- | 20.86 | 5049 | -- | -- |
| 210.13 | 0.68 | 11.7 | 4.03 | 0.627 | -- | -1.07 | -- | 2.05 | 19.4 | -- | -- | -- | -- |
| 213.22 | 0.684 | 11.7 | 4.05 | 0.626 | -- | -- | -- | 2.05 | 19.3 | -- | -- | -- | -- |
| 169.59 | 0.607 | 11.8 | 2.87 | -- | 1.83 | -- | -- | 1.47 | -- | 20.81 | 5059 | -- | -- |
| 148.24 | 0.567 | 12 | -- | 0.579 | 3.54 | -- | -- | 0.756 | 19.1 | 18.6 | 47520 | -- | -- |
| 234.02 | 0.715 | 11.7 | 4.04 | -- | -- | -- | -- | 2.04 | -- | -- | -- | -- | -- |
| 646.4 | 1.19 | 11.8 | -- | 0.591 | -- | -- | -- | 1.6 | 19.8 | -- | -- | -- | -- |
| 168.56 | 0.605 | 12 | -- | -- | 3.49 | -- | -- | 0.73 | -- | 18.6 | 47520 | -- | -- |
| 665.28 | 1.2 | 11.8 | -- | -- | -- | -- | -- | 1.59 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 124.32 | radiation | 1 | 43200 | < th | dose dependent | rect. | 19 | 10 |
| 3 | 124.66 | radiation | 1 | 43200 | < th | dose dependent | rect. | 23 | 6 |
| 7 | 126.87 | atmosphere | 1005 | 43200 | > th | dose dependent | rect. | 23 | 1 |
| 9 | 127.18 | atmosphere | 1010 | 43200 | < th | dose independent | rect. | 5 | 1 |
| 14 | 127.60 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 7 |
| 15 | 127.61 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 3 |
| 19 | 127.63 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 5 |
| 32 | 127.84 | atmosphere | 1010 | 43200 | < th | dose independent | rect. | 22 | 2 |
| 60 | 128.43 | radiation | 1 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 94 | 128.72 | atmosphere | 1010 | 43200 | < th | dose independent | rect. | 22 | 9 |
| 105 | 128.80 | atmosphere | 1010 | 43200 | > th | dose independent | rect. | 5 | 2 |
| 117 | 128.88 | atmosphere | 1005 | 43200 | > th | dose dependent | sin | 11 | NA |
| 170 | 129.07 | radiation | 1 | 43200 | < th | dose dependent | rect. | 3 | 2 |
| 222 | 129.20 | atmosphere | 1010 | 43200 | < th | dose independent | sin | 9 | NA |
| 248 | 129.26 | atmosphere | 1005 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 273 | 129.32 | atmosphere | 1010 | 43200 | > th | dose independent | rect. | 22 | 12 |
| 318 | 129.41 | atmosphere | 1010 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 329 | 129.43 | atmosphere | 1010 | 43200 | > th | dose independent | rect. | 22 | 1 |
| 442 | 129.61 | atmosphere | 1010 | 43200 | > th | dose independent | sin | 9 | NA |
| 579 | 129.77 | atmosphere | 1010 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 610 | 129.80 | atmosphere | 1005 | 43200 | > th | dose dependent | no | NA | NA |
| 646 | 129.84 | atmosphere | 1005 | 43200 | > th | dose dependent | rect. | 5 | 23 |
| 655 | 129.85 | atmosphere | 1005 | 43200 | > th | dose dependent | rect. | 3 | 23 |
| 665 | 129.87 | wind | 9 | 43200 | > th | dose independent | rect. | 16 | 1 |
| 751 | 129.96 | atmosphere | 1010 | 43200 | < th | dose independent | no | NA | NA |
| 754 | 129.96 | atmosphere | 1010 | 43200 | < th | dose independent | rect. | 9 | 23 |
| 763 | 129.97 | atmosphere | 1010 | 43200 | > th | dose independent | rect. | 19 | 6 |
| 766 | 129.97 | atmosphere | 1010 | 43200 | < th | dose independent | rect. | 4 | 23 |
| 790 | 129.99 | atmosphere | 1010 | 43200 | < th | dose independent | rect. | 1 | 23 |