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Os03g0334800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Lung seven transmembrane receptor family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11 (0.0145) R2 : 0.303
β1 : 0.724 (0.0531) R2dD : 0.295 R2D : 0.228
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.187 (0.0309) R2dN8 : 0.075 R2N8 : 0.00826
σ : 0.272
deviance : 33.9
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
12.62 0.167 11 0.828 0.482 -0.463 -0.205 -0.115 0.255 10.7 15.81 463 -- --
12.63 0.166 11 0.845 0.48 -0.464 -0.191 -- 0.26 10.7 16.1 471 -- --
12.79 0.167 11 0.832 0.485 -0.458 -- -0.0321 0.258 10.6 15.9 458 -- --
12.79 0.167 11 0.838 0.484 -0.455 -- -- 0.259 10.6 16 464 -- --
23.51 0.226 11 0.966 -- -0.755 -- 0.208 0.321 -- 16.36 723 -- --
15.4 0.184 11 0.735 0.555 -- -0.137 -- 0.187 9.82 -- -- -- --
15.48 0.184 11 0.73 0.556 -- -- -- 0.187 9.8 -- -- -- --
23.54 0.226 11 0.923 -- -0.752 -- -- 0.309 -- 16.31 722 -- --
29.4 0.253 11 -- 0.539 -0.0961 -- -- 0.117 9.85 14.61 414 -- --
33.9 0.272 11 0.724 -- -- -- -- 0.187 -- -- -- -- --
29.52 0.254 11 -- 0.554 -- -- -- 0.106 9.7 -- -- -- --
42.47 0.304 11 -- -- -0.422 -- -- 0.137 -- 24.4 682 -- --
47.74 0.322 11 -- -- -- -- -- 0.107 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 11.25 temperature 10.0 270 > th dose dependent rect. 23 20
11 11.55 temperature 10.0 270 > th dose dependent rect. 10 9
18 11.59 temperature 10.0 30 > th dose dependent rect. 3 17
30 11.71 temperature 30.0 270 < th dose independent rect. 5 19
33 11.73 temperature 30.0 270 < th dose independent rect. 4 21
87 12.03 temperature 10.0 10 > th dose dependent rect. 12 8
102 12.11 temperature 30.0 270 < th dose independent rect. 15 9
134 12.24 radiation 10.0 270 < th dose dependent rect. 23 9
141 12.25 temperature 30.0 270 < th dose dependent rect. 5 18
152 12.29 radiation 20.0 90 < th dose dependent rect. 1 9
157 12.31 temperature 20.0 30 > th dose independent rect. 12 8
200 12.39 humidity 70.0 270 > th dose independent rect. 17 7
216 12.41 humidity 50.0 270 > th dose independent rect. 5 18
219 12.41 humidity 50.0 270 > th dose independent rect. 4 21
221 12.41 temperature 10.0 720 > th dose dependent rect. 23 14
227 12.42 radiation 10.0 90 < th dose dependent rect. 1 14
236 12.43 temperature 20.0 720 > th dose dependent rect. 23 14
248 12.45 humidity 50.0 270 > th dose dependent rect. 16 8
258 12.46 wind 1.0 10 > th dose independent rect. 12 8
263 12.46 temperature 20.0 720 > th dose dependent rect. 1 12
274 12.47 temperature 10.0 720 > th dose dependent rect. 1 12
282 12.48 humidity 50.0 270 > th dose dependent rect. 17 6
289 12.48 radiation 10.0 270 < th dose dependent rect. 23 15
294 12.49 wind 7.0 30 < th dose independent rect. 12 8
296 12.49 radiation 10.0 270 < th dose independent rect. 23 9
305 12.49 temperature 10.0 270 > th dose dependent rect. 9 22
316 12.51 radiation 30.0 10 < th dose dependent rect. 1 10
323 12.51 radiation 10.0 10 < th dose dependent rect. 3 17
329 12.52 temperature 20.0 720 > th dose dependent sin 4 NA
331 12.52 radiation 10.0 90 < th dose dependent sin 4 NA
351 12.54 atmosphere 1010.0 10 < th dose independent rect. 12 8
352 12.54 temperature 30.0 270 < th dose independent rect. 19 15
354 12.54 temperature 10.0 720 > th dose dependent sin 3 NA
375 12.55 temperature 20.0 720 > th dose dependent rect. 1 10
387 12.56 wind 1.0 270 > th dose independent rect. 10 9
388 12.56 temperature 30.0 720 < th dose dependent rect. 5 2
391 12.56 temperature 10.0 720 > th dose dependent rect. 1 10
402 12.56 radiation 10.0 90 < th dose dependent rect. 1 18
403 12.56 temperature 15.0 270 > th dose dependent rect. 10 19
410 12.57 temperature 10.0 10 > th dose independent rect. 12 8
413 12.57 wind 9.0 270 < th dose independent rect. 10 9
414 12.57 radiation 10.0 90 < th dose independent rect. 1 9
416 12.57 precipitation 0.1 270 < th dose independent rect. 10 9
417 12.57 temperature 10.0 10 > th dose independent rect. 20 16
418 12.57 atmosphere 995.0 10 > th dose independent rect. 20 16
424 12.57 precipitation 0.1 270 < th dose dependent rect. 10 9
455 12.59 wind 7.0 30 < th dose independent rect. 3 17
457 12.59 temperature 10.0 720 > th dose dependent rect. 7 6
460 12.59 radiation 10.0 10 < th dose dependent rect. 3 11
465 12.59 radiation 10.0 10 < th dose dependent rect. 1 19
496 12.61 precipitation 0.1 10 < th dose independent rect. 12 8
501 12.61 atmosphere 995.0 270 > th dose independent rect. 6 17
504 12.61 radiation 20.0 10 < th dose dependent rect. 3 7
505 12.61 precipitation 0.1 10 < th dose dependent rect. 12 8
523 12.62 wind 9.0 10 < th dose independent rect. 20 16
526 12.62 temperature 10.0 270 > th dose dependent sin 22 NA
573 12.64 temperature 10.0 1440 > th dose independent rect. 13 8
576 12.64 temperature 10.0 1440 > th dose independent rect. 21 16
579 12.64 atmosphere 995.0 1440 > th dose independent rect. 21 16
581 12.64 radiation 10.0 30 < th dose independent rect. 1 19
637 12.67 radiation 1.0 270 < th dose independent rect. 23 15
660 12.67 temperature 10.0 720 > th dose dependent rect. 16 21
667 12.68 temperature 10.0 270 > th dose independent rect. 10 9
668 12.68 atmosphere 1015.0 270 < th dose independent rect. 10 9
671 12.68 temperature 10.0 270 > th dose independent rect. 19 15
672 12.68 atmosphere 995.0 270 > th dose independent rect. 19 15
674 12.68 precipitation 0.1 30 < th dose independent rect. 20 16
685 12.68 precipitation 0.1 30 < th dose dependent rect. 20 16
698 12.69 humidity 50.0 270 > th dose independent rect. 19 15
700 12.69 wind 7.0 30 < th dose independent rect. 1 19
726 12.70 wind 9.0 270 < th dose independent rect. 19 15
755 12.71 radiation 10.0 30 < th dose independent rect. 3 17
758 12.71 temperature 30.0 720 < th dose dependent rect. 4 5
781 12.72 temperature 15.0 270 > th dose independent rect. 23 7
805 12.73 wind 9.0 10 < th dose independent rect. 20 7
806 12.73 temperature 10.0 10 > th dose independent rect. 20 7
807 12.73 temperature 30.0 10 < th dose independent rect. 20 7
808 12.73 humidity 50.0 10 > th dose independent rect. 20 7
811 12.73 atmosphere 995.0 10 > th dose independent rect. 20 7
812 12.73 radiation 1.0 10 < th dose independent rect. 20 7
821 12.73 temperature 10.0 10 > th dose independent rect. 3 17
823 12.73 atmosphere 1015.0 10 < th dose independent rect. 3 17
826 12.73 wind 7.0 270 < th dose independent rect. 23 20
827 12.73 atmosphere 995.0 270 > th dose independent rect. 4 21
828 12.73 temperature 10.0 270 > th dose dependent rect. 24 5
830 12.73 radiation 1.0 10 < th dose dependent rect. 20 7
852 12.73 temperature 10.0 720 > th dose dependent rect. 16 19
862 12.74 precipitation 0.1 30 < th dose independent rect. 3 17
864 12.74 temperature 20.0 720 > th dose dependent rect. 8 3
867 12.74 temperature 10.0 270 > th dose dependent rect. 23 7
883 12.74 precipitation 0.1 30 < th dose dependent rect. 3 17
895 12.75 radiation 1.0 270 < th dose independent rect. 17 7
902 12.75 radiation 1.0 270 < th dose dependent rect. 17 6
929 12.76 wind 9.0 270 < th dose independent rect. 23 7
933 12.76 temperature 30.0 270 < th dose independent rect. 23 7
937 12.76 humidity 50.0 270 > th dose independent rect. 23 7
941 12.76 atmosphere 995.0 270 > th dose independent rect. 23 7
950 12.76 precipitation 0.1 10 < th dose independent rect. 20 7
956 12.76 temperature 10.0 270 > th dose independent rect. 6 17
969 12.76 precipitation 0.1 10 < th dose dependent rect. 20 7
970 12.76 radiation 10.0 270 < th dose dependent rect. 16 8