BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os11g0457000 Os11g0457000|Os11g0457000
(375 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os11g0457000 UDP-glucuronosyl/UDP-glucosyltransferase famil... 740 0.0
Os11g0457300 UDP-glucuronosyl/UDP-glucosyltransferase famil... 313 9e-86
Os06g0345000 114 9e-26
Os01g0541400 101 8e-22
Os11g0461300 UDP-glucuronosyl/UDP-glucosyltransferase famil... 97 2e-20
Os11g0471300 Conserved hypothetical protein 85 7e-17
Os03g0834800 80 2e-15
Os12g0125600 80 2e-15
Os03g0233600 73 3e-13
Os07g0672700 UDP-glucuronosyl/UDP-glucosyltransferase famil... 67 2e-11
>Os11g0457000 UDP-glucuronosyl/UDP-glucosyltransferase family protein
Length = 375
Score = 740 bits (1910), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 358/358 (100%), Positives = 358/358 (100%)
Query: 18 LHVVLFPFLAFGHINPFAQLARSLLAVGGGTESTAEVDADGAELLKLALDGTRPQVEALL 77
LHVVLFPFLAFGHINPFAQLARSLLAVGGGTESTAEVDADGAELLKLALDGTRPQVEALL
Sbjct: 18 LHVVLFPFLAFGHINPFAQLARSLLAVGGGTESTAEVDADGAELLKLALDGTRPQVEALL 77
Query: 78 ARLRPDVVLFDFVTPWVADAARRLGVRSARFSIFPAVSGAYFMAHGRGLYGARPTAEELA 137
ARLRPDVVLFDFVTPWVADAARRLGVRSARFSIFPAVSGAYFMAHGRGLYGARPTAEELA
Sbjct: 78 ARLRPDVVLFDFVTPWVADAARRLGVRSARFSIFPAVSGAYFMAHGRGLYGARPTAEELA 137
Query: 138 SAPEGFPPSSPLSTVPTYQAAHFTHIFTSFHGMPSTHDRSVACHNACDALVIRTCHEMEG 197
SAPEGFPPSSPLSTVPTYQAAHFTHIFTSFHGMPSTHDRSVACHNACDALVIRTCHEMEG
Sbjct: 138 SAPEGFPPSSPLSTVPTYQAAHFTHIFTSFHGMPSTHDRSVACHNACDALVIRTCHEMEG 197
Query: 198 PYIDYIAAQYGKPVLATGPLVPEPPRGELEERIICMAKSIVFGHGTHMVFVIVNDADAMD 257
PYIDYIAAQYGKPVLATGPLVPEPPRGELEERIICMAKSIVFGHGTHMVFVIVNDADAMD
Sbjct: 198 PYIDYIAAQYGKPVLATGPLVPEPPRGELEERIICMAKSIVFGHGTHMVFVIVNDADAMD 257
Query: 258 QVLQVNGDHNHNAFPFNLNFDADEEDLQIHPDMQEYGVYAGDVEVVFEQEELDDSEVMKA 317
QVLQVNGDHNHNAFPFNLNFDADEEDLQIHPDMQEYGVYAGDVEVVFEQEELDDSEVMKA
Sbjct: 258 QVLQVNGDHNHNAFPFNLNFDADEEDLQIHPDMQEYGVYAGDVEVVFEQEELDDSEVMKA 317
Query: 318 NGGNGYEIPHMGKERLERLDILPNTLSCGFELYNKLLKYVIWEVYHGFIFWAVFRLYI 375
NGGNGYEIPHMGKERLERLDILPNTLSCGFELYNKLLKYVIWEVYHGFIFWAVFRLYI
Sbjct: 318 NGGNGYEIPHMGKERLERLDILPNTLSCGFELYNKLLKYVIWEVYHGFIFWAVFRLYI 375
>Os11g0457300 UDP-glucuronosyl/UDP-glucosyltransferase family protein
Length = 479
Score = 313 bits (803), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 182/326 (55%), Positives = 209/326 (64%), Gaps = 61/326 (18%)
Query: 18 LHVVLFPFLAFGHINPFAQLARSLLAVGGGT----------------------------- 48
LHVV+FPFLAFGHI+PFAQLAR + VG G
Sbjct: 22 LHVVMFPFLAFGHISPFAQLARKMAGVGAGVRVTFLSAAANVPRVEAMLGGTGGTSTVAA 81
Query: 49 -------------ESTAEVDADGAELLKLALDGTRPQVEALLARLRPDVVLFDFVTPWVA 95
ESTAEV ADGAELLKLA+DGTRPQVEALLARL PDVVLFDF TPWV
Sbjct: 82 LELPRVPGLPEGAESTAEVSADGAELLKLAVDGTRPQVEALLARLHPDVVLFDFATPWVV 141
Query: 96 DAARRLGVRSARFSIFPAVSGAYFMAHGRG-LYG-ARPTAEELASAPEGFPPSSPLSTVP 153
D AR LGV++A FS+F AVSGAY MA R L G RPT ++LASAPEGFPPSSPL+TVP
Sbjct: 142 DVARPLGVKAALFSVFAAVSGAYVMAPARRRLPGPGRPTVDDLASAPEGFPPSSPLATVP 201
Query: 154 TYQAAHFTHIFTSFHGMPSTHDRSVACHNACDALVIRTCHEMEGPYIDYIAAQYGKPVLA 213
YQAA F+++F SFHGMP +DR ACHNACDALVI+TC EMEGPYIDYIAA++GKPVL
Sbjct: 202 AYQAADFSYVFESFHGMPCVYDRVAACHNACDALVIKTCAEMEGPYIDYIAAEHGKPVLV 261
Query: 214 TGPLVPEPPRGELEERIICMAK-----SIVFGHGTHMVFVIVNDADAMDQVLQVNGDHNH 268
TGP+VPEPPRGELEER S+VF F++ A A + +L +
Sbjct: 262 TGPIVPEPPRGELEERWATWLSSFPDNSVVFASFGSETFLL--HAAATELLLGLEA---- 315
Query: 269 NAFPF--NLNF----DADEEDLQIHP 288
A PF LNF DA+ E ++ P
Sbjct: 316 TALPFLAVLNFPKGTDAEAELRKLTP 341
>Os06g0345000
Length = 385
Score = 114 bits (286), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 55/70 (78%), Positives = 62/70 (88%)
Query: 244 HMVFVIVNDADAMDQVLQVNGDHNHNAFPFNLNFDADEEDLQIHPDMQEYGVYAGDVEVV 303
H + ++DADAMDQVLQVNG HNHNAFPF+LNFDA+EEDLQ H DMQEYGVYAGDV+VV
Sbjct: 68 HQGEIHLDDADAMDQVLQVNGGHNHNAFPFDLNFDANEEDLQYHLDMQEYGVYAGDVDVV 127
Query: 304 FEQEELDDSE 313
FEQEEL DS+
Sbjct: 128 FEQEELVDSD 137
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 36/41 (87%), Positives = 39/41 (95%)
Query: 312 SEVMKANGGNGYEIPHMGKERLERLDILPNTLSCGFELYNK 352
SEVMKA+GGNGY+IPHMGKE LERLDILPNTLSC FELY+K
Sbjct: 247 SEVMKADGGNGYKIPHMGKESLERLDILPNTLSCDFELYDK 287
>Os01g0541400
Length = 327
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 47/61 (77%), Positives = 52/61 (85%)
Query: 244 HMVFVIVNDADAMDQVLQVNGDHNHNAFPFNLNFDADEEDLQIHPDMQEYGVYAGDVEVV 303
H + ++D D MDQVLQVNG HNHNAFPF+LNFD DEEDLQ HPDMQEYGVYAGDV+VV
Sbjct: 74 HQGEIHLDDVDVMDQVLQVNGGHNHNAFPFDLNFDDDEEDLQYHPDMQEYGVYAGDVDVV 133
Query: 304 F 304
F
Sbjct: 134 F 134
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 37/49 (75%), Positives = 43/49 (87%)
Query: 313 EVMKANGGNGYEIPHMGKERLERLDILPNTLSCGFELYNKLLKYVIWEV 361
EVMKA+GGNGY+IPHMGKERLERLDILPNTLSC FELY+K+ + +V
Sbjct: 278 EVMKADGGNGYKIPHMGKERLERLDILPNTLSCDFELYDKVTTALANQV 326
>Os11g0461300 UDP-glucuronosyl/UDP-glucosyltransferase family protein
Length = 262
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 42/60 (70%), Positives = 47/60 (78%)
Query: 170 MPSTHDRSVACHNACDALVIRTCHEMEGPYIDYIAAQYGKPVLATGPLVPEPPRGELEER 229
MPS +DR AC A D LV +TC EMEGPYI+Y+A QY KP+L TGPLVPEPP GELEER
Sbjct: 1 MPSAYDRVAACDKASDVLVFKTCAEMEGPYIEYVATQYDKPILVTGPLVPEPPHGELEER 60
>Os11g0471300 Conserved hypothetical protein
Length = 105
Score = 85.1 bits (209), Expect = 7e-17, Method: Composition-based stats.
Identities = 36/41 (87%), Positives = 40/41 (97%)
Query: 313 EVMKANGGNGYEIPHMGKERLERLDILPNTLSCGFELYNKL 353
EV KA+GGNGY+IPHMGKERLERLDILPNTLSCGFELY+K+
Sbjct: 16 EVTKADGGNGYKIPHMGKERLERLDILPNTLSCGFELYDKI 56
>Os03g0834800
Length = 271
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 36/49 (73%), Positives = 42/49 (85%)
Query: 313 EVMKANGGNGYEIPHMGKERLERLDILPNTLSCGFELYNKLLKYVIWEV 361
EVM+A+GGNGY IPHMGKERLERLDILPNTLSCG ELY K++ + +V
Sbjct: 222 EVMEADGGNGYRIPHMGKERLERLDILPNTLSCGRELYEKVISALANQV 270
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 34/52 (65%), Positives = 42/52 (80%)
Query: 253 ADAMDQVLQVNGDHNHNAFPFNLNFDADEEDLQIHPDMQEYGVYAGDVEVVF 304
ADAMD++LQ+ G HN + FPF++N DA EE LQ+ DMQEY VYAGDVE+VF
Sbjct: 71 ADAMDEILQIYGGHNQHGFPFDVNSDAYEEHLQMQADMQEYDVYAGDVEIVF 122
>Os12g0125600
Length = 271
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 36/49 (73%), Positives = 42/49 (85%)
Query: 313 EVMKANGGNGYEIPHMGKERLERLDILPNTLSCGFELYNKLLKYVIWEV 361
EVM+A+GGNGY IPHMGKERLERLDILPNTLSCG ELY K++ + +V
Sbjct: 222 EVMEADGGNGYRIPHMGKERLERLDILPNTLSCGRELYEKVISALANQV 270
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 35/52 (67%), Positives = 43/52 (82%)
Query: 253 ADAMDQVLQVNGDHNHNAFPFNLNFDADEEDLQIHPDMQEYGVYAGDVEVVF 304
ADAMD++LQ+ G HN + FPF++N DA EE LQ+ DMQEYGVYAGDVE+VF
Sbjct: 71 ADAMDEILQIYGGHNQHGFPFDVNSDAYEEHLQMQADMQEYGVYAGDVEIVF 122
>Os03g0233600
Length = 334
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 54/76 (71%), Gaps = 2/76 (2%)
Query: 285 QIHPDM-QEYGVYAGD-VEVVFEQEELDDSEVMKANGGNGYEIPHMGKERLERLDILPNT 342
Q+H ++ +EY Y + V VF + EVMKA+GGNGY+IPHM K+RLERLD+LP +
Sbjct: 258 QVHSNVDEEYNEYNSNLVSRVFLNLQACFIEVMKADGGNGYKIPHMNKDRLERLDMLPTS 317
Query: 343 LSCGFELYNKLLKYVI 358
L+C LYNK+++ ++
Sbjct: 318 LTCDIALYNKVMQTLL 333
>Os07g0672700 UDP-glucuronosyl/UDP-glucosyltransferase family protein
Length = 474
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 97/246 (39%), Gaps = 54/246 (21%)
Query: 18 LHVVLFPFLAFGHINPFAQLARSLLAVGGG----------------------TESTAEVD 55
L V++FP+LA GHINP+ +LA L T+ + V+
Sbjct: 9 LRVLMFPWLAHGHINPYLELATRLTTTSSSQIDVVVHLVSTPVNLAAVAHRRTDRISLVE 68
Query: 56 ADGAEL--------------------LKLALDGTRPQVEALLARLRPDVVLFDFVTPWVA 95
EL LK A D P ALL L PDVVL+DF+ PW
Sbjct: 69 LHLPELPGLPPALHTTKHLPPRLMPALKRACDLAAPAFGALLDELSPDVVLYDFIQPWAP 128
Query: 96 DAARRLGVRSARFSIFPAVSGAYFMAHGRGLYGARPTAEELASAPEGFPPSSPLSTVPTY 155
A GV + FS A + A+F+ FP + +S
Sbjct: 129 LEAAARGVPAVHFSTCSAAATAFFLHF--------LDGGGGGGGRGAFPFEA-ISLGGAE 179
Query: 156 QAAHFTHIFTSFHG---MPSTHDRSVACHNACDALVIRTCHEMEGPYIDYIAAQYGKPVL 212
+ A +T + G +P ++ + + + ++TC E+E Y+DY++ GK ++
Sbjct: 180 EDARYTMLTCRDDGTALLPKGERLPLSFARSSEFVAVKTCVEIESKYMDYLSKLVGKEII 239
Query: 213 ATGPLV 218
GPL+
Sbjct: 240 PCGPLL 245
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.323 0.140 0.433
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 13,768,829
Number of extensions: 623547
Number of successful extensions: 2088
Number of sequences better than 1.0e-10: 10
Number of HSP's gapped: 2101
Number of HSP's successfully gapped: 14
Length of query: 375
Length of database: 17,035,801
Length adjustment: 102
Effective length of query: 273
Effective length of database: 11,709,973
Effective search space: 3196822629
Effective search space used: 3196822629
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 157 (65.1 bits)