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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os11g0457000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : UDP-glucuronosyl/UDP-glucosyltransferase family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.39 (0.0332) R2 : 0.656
β1 : -1.29 (0.134) R2dD : 0.0934 R2D : 0.214
β2 : -- (--) R2dC : -- R2C : --
β3 : 1.37 (0.0925) R2dE : 0.182 R2E : 0.296
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -3.45 (0.274) R2dD*E : 0.155 R2D*E : 0.319
γ1 : -0.293 (0.0729) R2dN8 : 0.0182 R2N8 : 0.0321
σ : 0.606
deviance : 169.31
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_____
C
peak time of C : --
E
wheather : temperature
threshold : 20.18
memory length : 787
response mode : < th
dose dependency : dose independent
G
type of G : rect.
peak or start time of G : 4.55
open length of G : 2.39

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose independent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
165 0.604 3.39 -1.23 0.246 1.42 -1.1 -3.78 -0.255 20 20.16 783 4.08 2.88
219.1 0.689 3.5 -1.85 0.206 1.97 -0.223 -- -0.513 19.8 20.4 725 5.31 2.67
167.14 0.602 3.4 -1.27 0.227 1.41 -- -3.48 -0.279 20.1 20.17 783 4.34 2.62
216.89 0.686 3.48 -1.89 0.224 1.96 -- -- -0.432 18.7 20.4 721 5.3 2.7
169.31 0.606 3.39 -1.29 -- 1.37 -- -3.45 -0.293 -- 20.18 787 4.55 2.39
268.15 0.768 3.52 -2.27 0.568 -- -2.95 -- -0.728 13.8 -- -- -- --
302.09 0.814 3.53 -2.37 0.566 -- -- -- -0.745 13.9 -- -- -- --
219.57 0.69 3.48 -1.92 -- 1.94 -- -- -0.467 -- 20.3 721 5.27 2.71
311.76 0.822 3.45 -- 0.243 2.27 -- -- -0.205 18.6 20.3 727 5.25 2.73
321.47 0.838 3.53 -2.39 -- -- -- -- -0.758 -- -- -- -- --
449.56 0.992 3.47 -- 0.61 -- -- -- -0.482 14 -- -- -- --
294.8 0.8 3.46 -- -- 2.41 -- -- -0.138 -- 20.4 2151 5.47 2.8
471.99 1.01 3.47 -- -- -- -- -- -0.493 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 170.83 temperature 20 720 < th dose independent rect. 4 3
10 185.06 radiation 20 4320 < th dose independent rect. 17 16
11 185.32 radiation 20 4320 < th dose independent rect. 6 3
12 185.44 radiation 20 4320 < th dose independent rect. 4 5
13 185.44 radiation 20 4320 < th dose independent rect. 2 7
16 185.46 radiation 20 4320 < th dose independent rect. 20 13
24 185.59 humidity 50 43200 < th dose dependent rect. 18 1
26 185.91 humidity 70 43200 < th dose independent rect. 21 7
29 186.02 humidity 50 43200 < th dose dependent rect. 18 10
30 186.10 humidity 50 43200 < th dose dependent rect. 18 4
39 186.73 humidity 50 43200 > th dose independent rect. 18 11
41 186.82 radiation 20 14400 < th dose independent rect. 17 2
44 187.00 radiation 20 14400 < th dose independent rect. 17 5
50 187.53 humidity 50 43200 > th dose independent rect. 18 5
52 187.61 humidity 50 43200 > th dose independent rect. 18 7
54 187.62 radiation 20 14400 < th dose independent rect. 17 11
57 187.68 radiation 20 14400 < th dose independent rect. 17 7
58 187.71 radiation 10 4320 > th dose dependent rect. 17 16
62 187.80 radiation 20 14400 < th dose independent rect. 17 9
68 188.16 radiation 10 4320 > th dose dependent rect. 6 3
84 188.39 humidity 60 43200 < th dose independent rect. 19 9
87 188.41 wind 5 43200 > th dose dependent rect. 10 3
89 188.45 wind 5 43200 > th dose dependent rect. 9 5
91 188.51 humidity 60 43200 > th dose independent rect. 19 1
92 188.54 humidity 70 43200 > th dose independent rect. 21 6
96 188.70 radiation 1 14400 < th dose dependent rect. 6 1
97 188.72 wind 7 43200 < th dose independent rect. 7 6
101 188.76 wind 7 43200 < th dose independent rect. 5 9
111 188.82 humidity 60 43200 < th dose independent rect. 19 1
112 188.82 wind 5 43200 > th dose dependent rect. 8 7
120 188.87 wind 7 43200 > th dose independent rect. 8 5
125 188.91 wind 5 43200 < th dose independent rect. 15 1
130 188.95 wind 5 43200 < th dose independent rect. 8 8
131 188.97 temperature 15 14400 < th dose dependent rect. 12 14
135 189.02 wind 7 43200 > th dose independent rect. 5 9
138 189.05 temperature 15 14400 > th dose independent rect. 22 1
140 189.05 wind 7 43200 < th dose independent rect. 1 13
141 189.06 wind 5 43200 > th dose dependent rect. 5 10
142 189.07 wind 5 43200 > th dose independent rect. 8 8
144 189.08 temperature 15 14400 < th dose dependent rect. 17 8
146 189.09 wind 7 43200 > th dose independent rect. 1 13
155 189.12 wind 5 43200 > th dose independent rect. 15 1
156 189.12 wind 7 43200 > th dose independent rect. 9 3
158 189.15 temperature 15 14400 < th dose independent rect. 22 1
176 189.25 temperature 15 43200 < th dose independent rect. 24 1
199 189.33 temperature 15 14400 < th dose dependent sin 17 NA
233 189.47 temperature 20 720 > th dose independent rect. 3 4
237 189.49 radiation 20 43200 < th dose independent rect. 5 1
248 189.53 wind 7 43200 < th dose independent sin 4 NA
251 189.54 humidity 70 43200 < th dose dependent rect. 23 3
274 189.63 wind 7 43200 > th dose independent sin 4 NA
281 189.65 radiation 10 43200 > th dose dependent rect. 5 1
298 189.66 humidity 70 43200 < th dose dependent rect. 21 7
307 189.69 wind 9 43200 > th dose dependent rect. 24 2
310 189.70 radiation 1 14400 < th dose dependent rect. 6 3
331 189.79 temperature 15 14400 < th dose dependent rect. 21 2
333 189.80 wind 7 43200 > th dose independent rect. 1 1
341 189.82 wind 9 43200 < th dose dependent rect. 10 2
378 189.98 humidity 50 43200 > th dose independent rect. 14 1
382 189.99 humidity 50 43200 < th dose independent rect. 18 4
400 190.02 temperature 15 14400 < th dose independent rect. 10 4
422 190.09 temperature 15 14400 > th dose independent rect. 10 4
467 190.18 wind 5 43200 > th dose dependent sin 2 NA
485 190.22 wind 9 43200 > th dose independent rect. 5 1
488 190.22 wind 9 43200 > th dose dependent rect. 5 1
493 190.23 temperature 15 14400 < th dose dependent rect. 24 22
510 190.26 temperature 15 14400 < th dose dependent rect. 12 22
512 190.27 wind 9 43200 < th dose dependent rect. 9 4
541 190.31 temperature 15 14400 < th dose dependent no NA NA
588 190.38 radiation 1 14400 < th dose dependent rect. 21 12
602 190.40 radiation 1 14400 < th dose dependent rect. 1 8
609 190.41 radiation 1 14400 < th dose dependent rect. 3 6
710 190.54 radiation 1 43200 < th dose dependent rect. 8 1
715 190.55 humidity 50 43200 < th dose independent rect. 14 1
725 190.56 humidity 70 43200 > th dose independent rect. 18 4
731 190.57 temperature 15 43200 < th dose independent sin 15 NA
733 190.57 radiation 1 43200 < th dose independent rect. 8 1
777 190.63 radiation 1 43200 > th dose independent rect. 8 1
808 190.66 temperature 15 43200 > th dose independent sin 16 NA
809 190.66 humidity 70 43200 < th dose independent rect. 18 4
830 190.67 radiation 1 43200 < th dose dependent rect. 8 6
858 190.70 wind 7 43200 < th dose dependent rect. 9 7
859 190.70 wind 7 43200 < th dose dependent rect. 8 9
879 190.73 temperature 15 14400 < th dose dependent rect. 23 1
906 190.77 temperature 15 43200 < th dose dependent rect. 2 1
921 190.80 wind 7 43200 < th dose independent rect. 1 1
975 190.87 wind 5 43200 < th dose dependent rect. 11 5
979 190.88 wind 5 43200 < th dose independent sin 1 NA