Os11g0471300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os11g0471300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 309.58 | 0.827 | 3.57 | -1.62 | 0.69 | 2.21 | -1.46 | -4.05 | 0.558 | 13.4 | 20.74 | 5561 | -- | -- |
| 317.29 | 0.83 | 3.74 | -2.02 | 0.731 | 3.29 | -1.72 | -- | 0.38 | 13.4 | 19.4 | 5769 | -- | -- |
| 318 | 0.831 | 3.57 | -1.66 | 0.69 | 2.21 | -- | -4.1 | 0.552 | 13 | 20.72 | 5544 | -- | -- |
| 320.97 | 0.834 | 3.74 | -1.77 | 0.701 | 3.67 | -- | -- | 0.387 | 12.8 | 18.94 | 10122 | -- | -- |
| 346.37 | 0.867 | 3.58 | -1.66 | -- | 2.33 | -- | -4.12 | 0.564 | -- | 20.8 | 5426 | -- | -- |
| 491.96 | 1.04 | 3.95 | -4.27 | 0.77 | -- | -1.57 | -- | -0.533 | 13.6 | -- | -- | -- | -- |
| 501.56 | 1.05 | 3.95 | -4.33 | 0.769 | -- | -- | -- | -0.543 | 13.2 | -- | -- | -- | -- |
| 351.02 | 0.873 | 3.74 | -1.62 | -- | 3.82 | -- | -- | 0.425 | -- | 18.94 | 9829 | -- | -- |
| 321.45 | 0.835 | 3.65 | -- | 0.692 | 4.5 | -- | -- | 0.792 | 13.4 | 18.3 | 22666 | -- | -- |
| 538.23 | 1.08 | 3.96 | -4.36 | -- | -- | -- | -- | -0.558 | -- | -- | -- | -- | -- |
| 995.31 | 1.48 | 3.84 | -- | 0.844 | -- | -- | -- | -0.0609 | 13.4 | -- | -- | -- | -- |
| 350.37 | 0.872 | 3.66 | -- | -- | 4.53 | -- | -- | 0.791 | -- | 18.3 | 22657 | -- | -- |
| 1039.17 | 1.5 | 3.85 | -- | -- | -- | -- | -- | -0.0749 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 298.25 | wind | 3 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 2 | 298.28 | wind | 3 | 43200 | < th | dose independent | rect. | 8 | 4 |
| 3 | 298.39 | wind | 3 | 43200 | < th | dose independent | rect. | 8 | 2 |
| 8 | 299.69 | wind | 3 | 43200 | > th | dose independent | rect. | 8 | 4 |
| 22 | 303.25 | temperature | 20 | 14400 | < th | dose dependent | rect. | 22 | 3 |
| 26 | 303.44 | wind | 5 | 43200 | < th | dose dependent | rect. | 8 | 4 |
| 27 | 303.45 | temperature | 20 | 14400 | < th | dose dependent | rect. | 23 | 1 |
| 51 | 304.64 | atmosphere | 1010 | 43200 | > th | dose dependent | rect. | 6 | 1 |
| 67 | 304.94 | temperature | 20 | 14400 | < th | dose independent | rect. | 18 | 5 |
| 85 | 305.23 | temperature | 20 | 14400 | < th | dose independent | rect. | 17 | 7 |
| 86 | 305.23 | temperature | 20 | 14400 | < th | dose independent | rect. | 14 | 12 |
| 88 | 305.26 | temperature | 20 | 14400 | < th | dose independent | rect. | 16 | 9 |
| 109 | 305.50 | temperature | 20 | 14400 | < th | dose dependent | sin | 11 | NA |
| 145 | 305.79 | temperature | 20 | 14400 | < th | dose independent | sin | 16 | NA |
| 152 | 305.85 | temperature | 20 | 14400 | > th | dose independent | rect. | 18 | 5 |
| 157 | 305.88 | temperature | 20 | 14400 | > th | dose independent | rect. | 14 | 12 |
| 180 | 306.02 | temperature | 20 | 14400 | < th | dose dependent | rect. | 3 | 1 |
| 186 | 306.05 | temperature | 20 | 14400 | > th | dose independent | rect. | 16 | 9 |
| 198 | 306.11 | wind | 1 | 43200 | > th | dose dependent | rect. | 9 | 3 |
| 216 | 306.24 | temperature | 20 | 14400 | > th | dose independent | rect. | 17 | 7 |
| 233 | 306.34 | wind | 3 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 266 | 306.51 | temperature | 20 | 14400 | > th | dose independent | sin | 16 | NA |
| 269 | 306.51 | wind | 1 | 43200 | > th | dose dependent | rect. | 8 | 5 |
| 288 | 306.64 | wind | 3 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 298 | 306.67 | atmosphere | 1010 | 43200 | > th | dose dependent | sin | 6 | NA |
| 396 | 307.14 | wind | 9 | 43200 | < th | dose dependent | rect. | 7 | 8 |
| 403 | 307.18 | wind | 1 | 43200 | > th | dose dependent | rect. | 7 | 8 |
| 487 | 307.45 | radiation | 1 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 501 | 307.49 | temperature | 20 | 43200 | < th | dose independent | rect. | 15 | 1 |
| 566 | 307.66 | atmosphere | 1010 | 43200 | < th | dose independent | rect. | 5 | 2 |
| 599 | 307.75 | temperature | 20 | 43200 | > th | dose independent | rect. | 14 | 2 |
| 672 | 307.92 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 20 |
| 743 | 308.03 | atmosphere | 1010 | 43200 | > th | dose dependent | no | NA | NA |
| 815 | 308.14 | temperature | 20 | 14400 | < th | dose independent | rect. | 4 | 22 |
| 828 | 308.16 | atmosphere | 1010 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 918 | 308.28 | temperature | 20 | 43200 | < th | dose independent | rect. | 5 | 13 |
| 950 | 308.32 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 16 |
| 977 | 308.35 | radiation | 1 | 14400 | > th | dose independent | rect. | 6 | 2 |
| 983 | 308.36 | temperature | 20 | 43200 | > th | dose independent | rect. | 5 | 13 |