BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os11g0444900 Os11g0444900|AF493074
(108 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os11g0444900 Octicosapeptide/Phox/Bem1p domain containing p... 189 5e-49
Os11g0444700 Octicosapeptide/Phox/Bem1p domain containing p... 183 2e-47
Os05g0427100 Octicosapeptide/Phox/Bem1p domain containing p... 108 8e-25
Os12g0594300 Octicosapeptide/Phox/Bem1p domain containing p... 93 4e-20
Os07g0438500 Octicosapeptide/Phox/Bem1p domain containing p... 91 2e-19
Os01g0139200 Octicosapeptide/Phox/Bem1p domain containing p... 90 3e-19
Os07g0556300 Octicosapeptide/Phox/Bem1p domain containing p... 87 3e-18
Os02g0809100 Octicosapeptide/Phox/Bem1p domain containing p... 82 7e-17
Os02g0766800 81 2e-16
Os03g0691650 70 5e-13
>Os11g0444900 Octicosapeptide/Phox/Bem1p domain containing protein
Length = 108
Score = 189 bits (479), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 91/91 (100%), Positives = 91/91 (100%)
Query: 18 EGTFVKFLCSYGGRILPRHADGALRYVGGDNRVVSVDRSLPFHELQRKLREMCGWEAVCL 77
EGTFVKFLCSYGGRILPRHADGALRYVGGDNRVVSVDRSLPFHELQRKLREMCGWEAVCL
Sbjct: 18 EGTFVKFLCSYGGRILPRHADGALRYVGGDNRVVSVDRSLPFHELQRKLREMCGWEAVCL 77
Query: 78 RCQLPTEDLDALVSVTGDDDLANLLEEYDAA 108
RCQLPTEDLDALVSVTGDDDLANLLEEYDAA
Sbjct: 78 RCQLPTEDLDALVSVTGDDDLANLLEEYDAA 108
>Os11g0444700 Octicosapeptide/Phox/Bem1p domain containing protein
Length = 224
Score = 183 bits (465), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 88/91 (96%), Positives = 88/91 (96%)
Query: 18 EGTFVKFLCSYGGRILPRHADGALRYVGGDNRVVSVDRSLPFHELQRKLREMCGWEAVCL 77
EG VKFLCSYGGRILPRHADGALRYVGGDNRVVSVDRSLPFHELQRKLREMCGWEAVCL
Sbjct: 36 EGACVKFLCSYGGRILPRHADGALRYVGGDNRVVSVDRSLPFHELQRKLREMCGWEAVCL 95
Query: 78 RCQLPTEDLDALVSVTGDDDLANLLEEYDAA 108
RCQLPTEDLDALVSV GDDDLANLLEEYDAA
Sbjct: 96 RCQLPTEDLDALVSVNGDDDLANLLEEYDAA 126
>Os05g0427100 Octicosapeptide/Phox/Bem1p domain containing protein
Length = 366
Score = 108 bits (270), Expect = 8e-25, Method: Composition-based stats.
Identities = 47/85 (55%), Positives = 67/85 (78%)
Query: 22 VKFLCSYGGRILPRHADGALRYVGGDNRVVSVDRSLPFHELQRKLREMCGWEAVCLRCQL 81
+K LCS+GGRI+PR +DGAL+Y+GG+ RV++V RS+PF +L++K+ EM E ++ QL
Sbjct: 43 IKILCSFGGRIMPRPSDGALKYIGGETRVLAVPRSIPFSDLKKKVEEMFRTEVAAIKYQL 102
Query: 82 PTEDLDALVSVTGDDDLANLLEEYD 106
EDLD LVSVT D+DL ++L+EYD
Sbjct: 103 VAEDLDVLVSVTCDEDLTHMLDEYD 127
>Os12g0594300 Octicosapeptide/Phox/Bem1p domain containing protein
Length = 1133
Score = 92.8 bits (229), Expect = 4e-20, Method: Composition-based stats.
Identities = 40/85 (47%), Positives = 65/85 (76%), Gaps = 1/85 (1%)
Query: 23 KFLCSYGGRILPRHADGALRYVGGDNRVVSVDRSLPFHELQRKLREMCGWEAVCLRCQLP 82
KF+CS+GG+I+PR +DG LRYVGG+ R++S+ R+ ++EL +K ++ + ++ QLP
Sbjct: 117 KFMCSFGGKIMPRPSDGKLRYVGGETRLISIPRNFSWNELVQKTLKIYSQPHI-IKYQLP 175
Query: 83 TEDLDALVSVTGDDDLANLLEEYDA 107
EDLDAL+S++ D+DL N++EEY +
Sbjct: 176 EEDLDALISLSCDEDLQNMMEEYSS 200
>Os07g0438500 Octicosapeptide/Phox/Bem1p domain containing protein
Length = 862
Score = 90.9 bits (224), Expect = 2e-19, Method: Composition-based stats.
Identities = 40/83 (48%), Positives = 61/83 (73%), Gaps = 1/83 (1%)
Query: 22 VKFLCSYGGRILPRHADGALRYVGGDNRVVSVDRSLPFHELQRKLREMCGWEAVCLRCQL 81
+K LCS+GG+ILPR +DG LRYVGG+ ++ + R++ + EL++K + V ++ QL
Sbjct: 166 IKILCSFGGKILPRPSDGKLRYVGGETHIIRISRNISWQELKQKTTAIYNQPHV-IKYQL 224
Query: 82 PTEDLDALVSVTGDDDLANLLEE 104
P EDLDAL+SV+ D+DL N++EE
Sbjct: 225 PGEDLDALISVSNDEDLRNMMEE 247
>Os01g0139200 Octicosapeptide/Phox/Bem1p domain containing protein
Length = 671
Score = 90.1 bits (222), Expect = 3e-19, Method: Composition-based stats.
Identities = 39/86 (45%), Positives = 63/86 (73%), Gaps = 1/86 (1%)
Query: 22 VKFLCSYGGRILPRHADGALRYVGGDNRVVSVDRSLPFHELQRKL-REMCGWEAVCLRCQ 80
++ +CS+GGRI+PR D +L Y+GG+ R+V+V+R+ ++ +L R + G + L+ Q
Sbjct: 56 LRLMCSFGGRIVPRPTDKSLCYLGGETRIVAVERNASLADVHARLSRSLLGGQPFTLKYQ 115
Query: 81 LPTEDLDALVSVTGDDDLANLLEEYD 106
LP EDLD+L+SV+ D+DL NL++EYD
Sbjct: 116 LPNEDLDSLISVSTDEDLDNLVDEYD 141
>Os07g0556300 Octicosapeptide/Phox/Bem1p domain containing protein
Length = 423
Score = 86.7 bits (213), Expect = 3e-18, Method: Composition-based stats.
Identities = 46/91 (50%), Positives = 60/91 (65%), Gaps = 6/91 (6%)
Query: 22 VKFLCSYGGRILPRHADGALRYVGGDNRVVSVDRSLPFHELQRKLREM------CGWEAV 75
V+ +CS+GGRILPR D LRYVGG+ R+VSV R+ F L L ++ G +
Sbjct: 94 VRLMCSFGGRILPRPGDHQLRYVGGETRIVSVPRAATFDALVAALAKVAPALFPAGGPSP 153
Query: 76 CLRCQLPTEDLDALVSVTGDDDLANLLEEYD 106
LR QLP +DLDAL+S+T DDD+ NL+EE D
Sbjct: 154 ALRYQLPQDDLDALISITSDDDVDNLIEEID 184
>Os02g0809100 Octicosapeptide/Phox/Bem1p domain containing protein
Length = 507
Score = 82.4 bits (202), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 41/86 (47%), Positives = 57/86 (66%), Gaps = 1/86 (1%)
Query: 22 VKFLCSYGGRILPRHADGALRYVGGDNRVVSVDRSLPFHELQRKLREMCGWEA-VCLRCQ 80
V+ + SYGGRI PR D L YV G+ +++S++R L F + +L + G C++ Q
Sbjct: 41 VRLMVSYGGRIQPRPHDHQLSYVNGETKILSLERPLRFADFAARLAGLAGSPGDFCVKYQ 100
Query: 81 LPTEDLDALVSVTGDDDLANLLEEYD 106
LP EDLDALVSVT D+DL +L+ EYD
Sbjct: 101 LPGEDLDALVSVTNDEDLEHLVLEYD 126
>Os02g0766800
Length = 200
Score = 80.9 bits (198), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 62/91 (68%), Gaps = 8/91 (8%)
Query: 19 GTFVKFLCSYGGRILPRHADGALRYVGGDNRVVSVDRSLPFH---ELQRKLREMCGWEAV 75
G+ +K LCS+GGRI+P +D AL+Y+ + R+++V RS+PF +L++K+ EM E
Sbjct: 45 GSRIKILCSFGGRIMPCPSDDALKYIDSETRILAVPRSIPFSPRADLKKKVEEMFRTEVA 104
Query: 76 CLRCQLPTEDLDALVSVTGDDDLANLLEEYD 106
+ EDLD LVSVT D+DL ++L+EYD
Sbjct: 105 VV-----AEDLDVLVSVTWDEDLTHMLDEYD 130
>Os03g0691650
Length = 250
Score = 69.7 bits (169), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 54/90 (60%), Gaps = 5/90 (5%)
Query: 22 VKFLCSYGGRILPRHADGALRYVGGDNRVVSVDRSLPFHELQRKLREMCGW-----EAVC 76
++ LCS+GGR++P G LRYVGG+ R ++V R PF EL +L E G AV
Sbjct: 1 MRLLCSHGGRLVPCGPGGGLRYVGGETRALAVPRGAPFRELTARLAEKAGAGGDAVTAVR 60
Query: 77 LRCQLPTEDLDALVSVTGDDDLANLLEEYD 106
R D D LVSVT D++LA++ +EYD
Sbjct: 61 YRLADGGLDEDLLVSVTSDEELAHMRDEYD 90
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.323 0.141 0.441
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 3,703,397
Number of extensions: 144642
Number of successful extensions: 330
Number of sequences better than 1.0e-10: 10
Number of HSP's gapped: 323
Number of HSP's successfully gapped: 10
Length of query: 108
Length of database: 17,035,801
Length adjustment: 76
Effective length of query: 32
Effective length of database: 13,067,537
Effective search space: 418161184
Effective search space used: 418161184
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 149 (62.0 bits)