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Os12g0594300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Octicosapeptide/Phox/Bem1p domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.78 (0.0174) R2 : 0.828
β1 : -- (--) R2dD : -- R2D : --
β2 : 2.14 (0.0456) R2dC : 0.832 R2C : 0.825
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0916 (0.0366) R2dN8 : 0.00304 R2N8 : -0.00371
σ : 0.328
deviance : 49.23
__
_____
C
peak time of C : 6.31
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
34.87 0.277 9.81 -0.655 2.1 -0.359 -0.141 -0.259 -0.187 5.54 0.02621 7 -- --
35.3 0.277 9.81 -0.655 2.1 -0.359 -0.141 -- -0.187 5.54 0.02621 6 -- --
34.92 0.275 9.81 -0.656 2.1 -0.359 -- -0.259 -0.186 5.55 0.02618 6 -- --
35.35 0.277 9.81 -0.662 2.1 -0.359 -- -- -0.189 5.55 0.0001646 6 -- --
262.6 0.759 9.84 -0.59 -- -0.369 -- -0.104 -0.139 -- 0.02618 6 -- --
38.74 0.292 9.8 -0.63 2.15 -- -0.071 -- -0.162 6.29 -- -- -- --
38.75 0.292 9.8 -0.63 2.15 -- -- -- -0.162 6.29 -- -- -- --
262.67 0.758 9.84 -0.594 -- -0.369 -- -- -0.14 -- 0.0001646 6 -- --
47.26 0.32 9.81 -- 2.13 -0.365 -- -- -0.155 5.52 2.188e-06 6 -- --
277.98 0.779 9.84 -0.573 -- -- -- -- -0.115 -- -- -- -- --
49.23 0.328 9.78 -- 2.14 -- -- -- -0.0916 6.31 -- -- -- --
271.97 0.771 9.83 -- -- -0.361 -- -- -0.0737 -- 0.0001646 6 -- --
286.64 0.79 9.82 -- -- -- -- -- -0.0518 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 31.13 atmosphere 995.0 90 > th dose dependent rect. 17 10
2 31.24 precipitation 0.1 270 < th dose independent rect. 1 14
3 31.24 precipitation 0.1 270 < th dose dependent rect. 1 14
4 31.51 precipitation 0.1 90 < th dose independent rect. 3 14
5 31.51 precipitation 0.1 90 < th dose dependent rect. 3 14
6 31.57 precipitation 0.1 270 < th dose independent rect. 15 10
7 31.57 precipitation 0.1 270 < th dose dependent rect. 15 10
8 31.63 radiation 30.0 90 < th dose dependent rect. 17 10
10 31.65 precipitation 0.1 90 < th dose independent rect. 17 10
11 31.65 precipitation 0.1 90 < th dose dependent rect. 17 10
12 31.68 atmosphere 1000.0 90 > th dose independent rect. 17 10
14 31.69 temperature 10.0 270 > th dose dependent rect. 6 4
16 31.74 temperature 10.0 90 > th dose independent rect. 17 10
17 31.74 radiation 20.0 90 < th dose independent rect. 17 10
20 31.74 temperature 10.0 90 > th dose independent rect. 3 14
21 31.74 atmosphere 1015.0 90 < th dose independent rect. 3 14
27 31.84 wind 9.0 90 < th dose independent rect. 17 10
29 31.86 humidity 50.0 90 > th dose independent rect. 17 10
31 31.92 temperature 10.0 270 > th dose independent rect. 15 10
32 31.92 radiation 40.0 270 < th dose independent rect. 15 10
33 31.92 temperature 10.0 270 > th dose independent rect. 1 14
34 31.92 atmosphere 1015.0 270 < th dose independent rect. 1 14
37 31.99 wind 9.0 90 < th dose independent rect. 3 14
39 32.09 temperature 15.0 270 > th dose independent rect. 11 18
42 32.11 wind 9.0 270 < th dose independent rect. 15 10
43 32.11 wind 9.0 270 < th dose independent rect. 1 14
44 32.12 atmosphere 995.0 270 > th dose independent rect. 1 14
47 32.15 temperature 15.0 270 > th dose independent rect. 10 20
49 32.20 atmosphere 995.0 270 > th dose independent rect. 15 10
57 32.31 wind 9.0 270 < th dose dependent rect. 6 4
65 32.38 atmosphere 1015.0 270 < th dose dependent rect. 6 4
67 32.41 wind 7.0 270 < th dose independent rect. 6 4
69 32.43 atmosphere 995.0 90 > th dose independent rect. 3 14
71 32.48 temperature 15.0 270 > th dose independent rect. 6 4
72 32.48 temperature 15.0 270 > th dose independent rect. 19 11
76 32.54 humidity 50.0 270 > th dose independent rect. 6 4
77 32.54 precipitation 0.1 270 < th dose independent rect. 6 4
78 32.54 radiation 40.0 90 < th dose independent rect. 3 14
79 32.54 precipitation 0.1 270 < th dose dependent rect. 6 4
82 32.55 precipitation 0.1 270 < th dose independent rect. 10 20
84 32.55 precipitation 0.1 270 < th dose dependent rect. 10 20
86 32.56 atmosphere 995.0 270 > th dose independent rect. 6 4
87 32.56 atmosphere 1015.0 270 < th dose independent rect. 6 4
92 32.58 wind 9.0 270 < th dose independent rect. 10 20
93 32.59 wind 7.0 270 < th dose independent rect. 5 6
101 32.64 humidity 50.0 270 > th dose independent rect. 1 14
106 32.68 atmosphere 1015.0 270 < th dose dependent rect. 7 2
110 32.70 radiation 1.0 270 > th dose independent rect. 6 4
114 32.73 temperature 15.0 270 > th dose independent rect. 5 6
118 32.76 humidity 50.0 270 > th dose independent rect. 5 6
121 32.77 temperature 10.0 10 > th dose dependent rect. 7 5
123 32.77 radiation 10.0 90 < th dose dependent rect. 8 19
130 32.82 precipitation 0.1 270 < th dose independent rect. 5 6
132 32.82 precipitation 0.1 270 < th dose dependent rect. 5 6
134 32.83 atmosphere 995.0 270 > th dose independent rect. 5 6
135 32.83 atmosphere 1015.0 270 < th dose independent rect. 5 6
137 32.83 wind 9.0 270 < th dose independent rect. 11 18
145 32.85 precipitation 0.1 270 < th dose independent rect. 11 18
146 32.85 precipitation 0.1 270 < th dose dependent rect. 11 18
169 32.95 temperature 15.0 10 > th dose independent rect. 12 19
175 32.96 radiation 1.0 270 > th dose independent rect. 17 17
192 33.05 wind 9.0 90 < th dose dependent rect. 17 10
212 33.12 radiation 1.0 30 < th dose dependent rect. 5 23
223 33.13 atmosphere 1015.0 270 < th dose independent rect. 10 20
269 33.23 atmosphere 1015.0 10 < th dose dependent rect. 7 5
276 33.24 wind 1.0 90 > th dose independent rect. 17 10
280 33.25 temperature 30.0 90 < th dose independent rect. 17 10
290 33.27 radiation 1.0 270 < th dose independent sin 9 NA
291 33.27 temperature 30.0 270 < th dose independent rect. 6 4
306 33.29 radiation 1.0 30 < th dose independent rect. 5 23
308 33.30 wind 1.0 270 > th dose independent rect. 15 10
333 33.33 temperature 15.0 10 > th dose independent rect. 14 17
340 33.35 wind 1.0 270 > th dose independent rect. 6 4
342 33.35 wind 5.0 90 < th dose independent rect. 7 20
348 33.36 humidity 50.0 270 > th dose independent rect. 11 18
349 33.36 humidity 50.0 270 > th dose independent rect. 10 20
369 33.40 wind 7.0 90 < th dose dependent rect. 3 4
375 33.42 precipitation 0.1 270 < th dose independent rect. 3 2
377 33.42 atmosphere 1015.0 270 < th dose independent rect. 11 18
378 33.42 precipitation 0.1 270 < th dose dependent rect. 3 2
386 33.43 atmosphere 995.0 270 > th dose independent rect. 10 20
393 33.45 wind 5.0 270 < th dose independent rect. 2 3
466 33.52 radiation 1.0 270 > th dose independent rect. 15 22
474 33.54 radiation 1.0 270 > th dose independent sin 9 NA
481 33.55 temperature 15.0 720 > th dose independent rect. 19 3
503 33.58 humidity 90.0 270 < th dose independent rect. 7 3
518 33.60 atmosphere 995.0 270 > th dose independent rect. 11 18
522 33.60 wind 9.0 90 < th dose dependent rect. 7 20
523 33.61 wind 3.0 10 < th dose dependent rect. 4 3
540 33.63 wind 1.0 270 > th dose independent rect. 11 18
551 33.64 radiation 40.0 270 < th dose independent rect. 6 3
563 33.65 humidity 50.0 720 > th dose dependent rect. 22 5
566 33.66 precipitation 0.1 270 < th dose independent rect. 6 13
568 33.66 radiation 1.0 270 < th dose dependent sin 9 NA
572 33.66 precipitation 0.1 270 < th dose dependent rect. 6 13
575 33.67 radiation 1.0 10 > th dose independent rect. 12 19
615 33.71 humidity 50.0 10 > th dose independent rect. 7 5
618 33.71 wind 7.0 270 < th dose independent rect. 19 11
622 33.71 wind 9.0 10 < th dose independent rect. 12 19
647 33.73 atmosphere 995.0 90 > th dose independent rect. 7 20
662 33.75 radiation 1.0 90 > th dose independent rect. 11 19
663 33.75 radiation 40.0 10 < th dose independent rect. 12 19
668 33.75 temperature 10.0 90 > th dose dependent rect. 3 4
672 33.76 precipitation 0.1 270 < th dose independent rect. 20 10
680 33.76 precipitation 0.1 270 < th dose dependent rect. 20 10
686 33.77 temperature 10.0 90 > th dose independent rect. 3 4
689 33.77 temperature 30.0 90 < th dose independent rect. 3 4
690 33.77 humidity 50.0 90 > th dose independent rect. 3 4
692 33.77 atmosphere 995.0 90 > th dose independent rect. 3 4
693 33.77 atmosphere 1015.0 90 < th dose independent rect. 3 4
694 33.77 radiation 30.0 90 < th dose independent rect. 3 4
696 33.77 wind 9.0 10 < th dose independent rect. 7 5
702 33.77 temperature 10.0 90 > th dose independent rect. 7 20
703 33.77 precipitation 0.1 90 < th dose independent rect. 7 20
709 33.77 precipitation 0.1 90 < th dose dependent rect. 7 20
712 33.78 precipitation 0.1 10 < th dose independent rect. 12 19
714 33.78 precipitation 0.1 270 < th dose independent rect. 5 21
715 33.78 precipitation 0.1 10 < th dose dependent rect. 12 19
716 33.78 precipitation 0.1 270 < th dose dependent rect. 5 21
727 33.80 atmosphere 1005.0 90 > th dose independent rect. 3 3
729 33.80 atmosphere 1010.0 270 < th dose independent rect. 20 10
735 33.81 radiation 40.0 270 < th dose independent rect. 7 1
742 33.81 wind 9.0 90 < th dose independent rect. 7 20
757 33.82 humidity 50.0 270 > th dose dependent rect. 6 3
760 33.83 radiation 1.0 10 > th dose independent rect. 7 5
773 33.83 radiation 40.0 90 < th dose dependent rect. 3 4
782 33.84 humidity 60.0 270 > th dose independent rect. 19 11
797 33.85 atmosphere 1005.0 270 > th dose independent rect. 1 4
801 33.85 temperature 30.0 270 < th dose independent rect. 19 11
803 33.85 atmosphere 995.0 270 > th dose independent rect. 19 11
804 33.85 radiation 20.0 270 < th dose independent rect. 19 11
807 33.85 temperature 10.0 270 > th dose independent rect. 6 13
808 33.85 atmosphere 1015.0 270 < th dose independent rect. 6 13
814 33.85 radiation 10.0 10 < th dose dependent sin 14 NA
838 33.86 temperature 20.0 90 > th dose dependent rect. 4 2
850 33.87 temperature 10.0 10 > th dose independent rect. 7 5
852 33.87 atmosphere 995.0 10 > th dose independent rect. 7 5
853 33.87 atmosphere 1015.0 10 < th dose independent rect. 7 5
854 33.87 precipitation 0.1 10 < th dose independent rect. 7 5
862 33.87 precipitation 0.1 10 < th dose dependent rect. 7 5
879 33.89 atmosphere 1015.0 270 < th dose independent rect. 10 11
905 33.90 temperature 10.0 270 > th dose independent rect. 5 21
916 33.90 atmosphere 995.0 90 > th dose dependent rect. 3 14
918 33.91 radiation 1.0 270 < th dose independent rect. 2 3
925 33.91 radiation 40.0 90 < th dose independent rect. 11 20
927 33.91 radiation 1.0 270 < th dose dependent rect. 2 3
940 33.92 radiation 40.0 270 < th dose dependent rect. 19 11
941 33.93 radiation 1.0 10 < th dose independent sin 14 NA
945 33.93 wind 9.0 270 < th dose independent rect. 6 13
969 33.94 humidity 50.0 270 > th dose dependent rect. 7 1
990 33.95 radiation 40.0 90 < th dose dependent rect. 3 14