Os11g0444700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Octicosapeptide/Phox/Bem1p domain containing protein.
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Os11g0444700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Octicosapeptide/Phox/Bem1p domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 175.22 | 0.622 | 13.3 | 0.271 | 1.16 | -2.81 | -1.43 | -2.96 | 0.696 | 4.52 | 19.4 | 5702 | -- | -- |
| 184.09 | 0.632 | 13.4 | 0.0791 | 1.17 | -1.97 | -1.28 | -- | 0.651 | 4.5 | 19.7 | 5601 | -- | -- |
| 177.77 | 0.621 | 13.3 | 0.199 | 1.15 | -3.03 | -- | -3.17 | 0.739 | 4.89 | 18.9 | 5575 | -- | -- |
| 188.26 | 0.639 | 13.4 | 0.0277 | 1.16 | -2.04 | -- | -- | 0.631 | 4.83 | 19.66 | 5570 | -- | -- |
| 246.32 | 0.731 | 13.3 | 0.281 | -- | -3.59 | -- | -4.22 | 0.764 | -- | 18.6 | 5504 | -- | -- |
| 251.81 | 0.744 | 13.3 | 1.38 | 1.21 | -- | -1.45 | -- | 1.19 | 4.51 | -- | -- | -- | -- |
| 257.17 | 0.751 | 13.3 | 1.39 | 1.21 | -- | -- | -- | 1.19 | 4.74 | -- | -- | -- | -- |
| 259.65 | 0.75 | 13.5 | -0.000618 | -- | -2.15 | -- | -- | 0.623 | -- | 19.7 | 5557 | -- | -- |
| 188.27 | 0.639 | 13.4 | -- | 1.16 | -2.06 | -- | -- | 0.624 | 4.83 | 19.69 | 5574 | -- | -- |
| 335.09 | 0.855 | 13.3 | 1.44 | -- | -- | -- | -- | 1.23 | -- | -- | -- | -- | -- |
| 308.33 | 0.821 | 13.3 | -- | 1.24 | -- | -- | -- | 1.04 | 4.71 | -- | -- | -- | -- |
| 259.64 | 0.75 | 13.5 | -- | -- | -2.14 | -- | -- | 0.632 | -- | 19.69 | 5556 | -- | -- |
| 389.71 | 0.921 | 13.4 | -- | -- | -- | -- | -- | 1.07 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 167.60 | humidity | 60 | 43200 | < th | dose dependent | rect. | 18 | 19 |
| 3 | 167.88 | humidity | 60 | 43200 | < th | dose dependent | rect. | 11 | 2 |
| 4 | 168.01 | humidity | 60 | 43200 | < th | dose independent | rect. | 8 | 2 |
| 8 | 168.37 | humidity | 60 | 43200 | < th | dose dependent | rect. | 8 | 5 |
| 22 | 168.77 | humidity | 60 | 43200 | > th | dose independent | rect. | 8 | 2 |
| 26 | 169.01 | humidity | 60 | 43200 | < th | dose dependent | sin | 8 | NA |
| 28 | 169.24 | radiation | 10 | 43200 | < th | dose independent | rect. | 16 | 14 |
| 32 | 169.31 | radiation | 10 | 43200 | < th | dose independent | rect. | 16 | 9 |
| 36 | 169.32 | radiation | 10 | 43200 | < th | dose independent | rect. | 16 | 7 |
| 38 | 169.33 | radiation | 10 | 43200 | < th | dose independent | rect. | 16 | 2 |
| 39 | 169.33 | radiation | 10 | 43200 | < th | dose independent | rect. | 16 | 5 |
| 45 | 169.48 | humidity | 60 | 43200 | < th | dose independent | rect. | 19 | 15 |
| 87 | 170.30 | radiation | 10 | 43200 | < th | dose independent | sin | 13 | NA |
| 95 | 170.58 | humidity | 60 | 43200 | > th | dose independent | rect. | 19 | 15 |
| 127 | 170.95 | radiation | 10 | 43200 | < th | dose independent | rect. | 12 | 19 |
| 131 | 170.99 | humidity | 50 | 43200 | > th | dose independent | rect. | 10 | 12 |
| 136 | 171.01 | humidity | 50 | 43200 | > th | dose independent | rect. | 10 | 18 |
| 164 | 171.14 | radiation | 1 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 184 | 171.18 | humidity | 60 | 43200 | < th | dose independent | rect. | 21 | 13 |
| 189 | 171.22 | radiation | 10 | 43200 | < th | dose independent | rect. | 24 | 8 |
| 194 | 171.23 | radiation | 10 | 43200 | < th | dose independent | rect. | 4 | 4 |
| 200 | 171.23 | radiation | 1 | 43200 | > th | dose dependent | rect. | 17 | 14 |
| 201 | 171.24 | radiation | 10 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 234 | 171.37 | humidity | 50 | 43200 | > th | dose independent | rect. | 15 | 23 |
| 260 | 171.49 | humidity | 50 | 43200 | > th | dose independent | rect. | 18 | 23 |
| 261 | 171.50 | humidity | 50 | 43200 | > th | dose independent | sin | 22 | NA |
| 290 | 171.54 | humidity | 50 | 43200 | > th | dose independent | no | NA | NA |
| 314 | 171.58 | humidity | 70 | 43200 | > th | dose independent | rect. | 5 | 4 |
| 327 | 171.64 | humidity | 70 | 43200 | < th | dose dependent | rect. | 8 | 1 |
| 328 | 171.65 | radiation | 40 | 43200 | < th | dose independent | sin | 14 | NA |
| 357 | 171.71 | radiation | 40 | 43200 | < th | dose independent | rect. | 13 | 19 |
| 386 | 171.80 | humidity | 70 | 43200 | > th | dose independent | rect. | 21 | 12 |
| 409 | 171.89 | radiation | 40 | 43200 | < th | dose dependent | rect. | 19 | 12 |
| 453 | 172.03 | radiation | 10 | 43200 | < th | dose independent | rect. | 12 | 10 |
| 463 | 172.03 | radiation | 40 | 43200 | < th | dose dependent | rect. | 24 | 7 |
| 465 | 172.04 | radiation | 10 | 43200 | < th | dose independent | rect. | 12 | 7 |
| 474 | 172.06 | radiation | 40 | 43200 | < th | dose independent | rect. | 13 | 12 |
| 481 | 172.06 | radiation | 30 | 43200 | < th | dose dependent | rect. | 4 | 3 |
| 486 | 172.07 | radiation | 40 | 43200 | < th | dose independent | rect. | 13 | 10 |
| 495 | 172.08 | radiation | 40 | 43200 | < th | dose independent | rect. | 13 | 8 |
| 518 | 172.10 | radiation | 40 | 43200 | < th | dose independent | rect. | 13 | 3 |
| 525 | 172.10 | humidity | 50 | 43200 | > th | dose independent | rect. | 13 | 23 |
| 535 | 172.14 | radiation | 20 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 568 | 172.22 | radiation | 10 | 43200 | < th | dose independent | rect. | 15 | 22 |
| 608 | 172.31 | humidity | 60 | 43200 | < th | dose independent | rect. | 1 | 9 |
| 612 | 172.32 | humidity | 50 | 43200 | > th | dose independent | rect. | 13 | 3 |
| 689 | 172.52 | radiation | 1 | 43200 | > th | dose dependent | rect. | 16 | 16 |
| 736 | 172.67 | humidity | 50 | 43200 | > th | dose independent | rect. | 17 | 20 |
| 752 | 172.75 | temperature | 15 | 4320 | > th | dose dependent | rect. | 2 | 1 |
| 763 | 172.87 | temperature | 20 | 14400 | < th | dose dependent | rect. | 2 | 1 |
| 821 | 172.98 | radiation | 10 | 43200 | < th | dose independent | no | NA | NA |
| 826 | 172.98 | radiation | 10 | 43200 | < th | dose independent | rect. | 4 | 21 |
| 831 | 172.98 | radiation | 10 | 43200 | < th | dose independent | rect. | 24 | 23 |
| 837 | 172.99 | radiation | 10 | 43200 | < th | dose independent | rect. | 4 | 15 |
| 908 | 173.08 | atmosphere | 1010 | 14400 | > th | dose dependent | rect. | 11 | 1 |
| 916 | 173.13 | humidity | 50 | 43200 | < th | dose independent | rect. | 10 | 12 |
| 936 | 173.18 | humidity | 50 | 43200 | < th | dose independent | rect. | 16 | 22 |
| 977 | 173.25 | radiation | 40 | 43200 | < th | dose dependent | rect. | 17 | 15 |