BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os11g0444700 Os11g0444700|AK066452
(224 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os11g0444700 Octicosapeptide/Phox/Bem1p domain containing p... 382 e-107
Os11g0444900 Octicosapeptide/Phox/Bem1p domain containing p... 184 5e-47
Os05g0427100 Octicosapeptide/Phox/Bem1p domain containing p... 110 7e-25
Os12g0594300 Octicosapeptide/Phox/Bem1p domain containing p... 100 1e-21
Os01g0139200 Octicosapeptide/Phox/Bem1p domain containing p... 94 9e-20
Os07g0556300 Octicosapeptide/Phox/Bem1p domain containing p... 93 1e-19
Os02g0766800 87 1e-17
Os07g0438500 Octicosapeptide/Phox/Bem1p domain containing p... 85 3e-17
Os02g0809100 Octicosapeptide/Phox/Bem1p domain containing p... 82 2e-16
Os03g0691650 70 1e-12
>Os11g0444700 Octicosapeptide/Phox/Bem1p domain containing protein
Length = 224
Score = 382 bits (982), Expect = e-107, Method: Compositional matrix adjust.
Identities = 197/224 (87%), Positives = 197/224 (87%)
Query: 1 MVGTXXXXXXXXXXLGSLXXXXXXXXXXXXXXXXXEGACVKFLCSYGGRILPRHADGALR 60
MVGT LGSL EGACVKFLCSYGGRILPRHADGALR
Sbjct: 1 MVGTSSWSSSSSSSLGSLDDDIIVACVVKAADAAVEGACVKFLCSYGGRILPRHADGALR 60
Query: 61 YVGGDNRVVSVDRSLPFHELQRKLREMCGWEAVCLRCQLPTEDLDALVSVNGDDDLANLL 120
YVGGDNRVVSVDRSLPFHELQRKLREMCGWEAVCLRCQLPTEDLDALVSVNGDDDLANLL
Sbjct: 61 YVGGDNRVVSVDRSLPFHELQRKLREMCGWEAVCLRCQLPTEDLDALVSVNGDDDLANLL 120
Query: 121 EEYDAASRDRLQPLKIRAFLFPRTTATTTAPLSRSPSPTAASRTAPRAHYQHQTGSAPSC 180
EEYDAASRDRLQPLKIRAFLFPRTTATTTAPLSRSPSPTAASRTAPRAHYQHQTGSAPSC
Sbjct: 121 EEYDAASRDRLQPLKIRAFLFPRTTATTTAPLSRSPSPTAASRTAPRAHYQHQTGSAPSC 180
Query: 181 ASRWAARQMSLPPARVPHQQQHYNRHGGDARPQRYLVQSASSRW 224
ASRWAARQMSLPPARVPHQQQHYNRHGGDARPQRYLVQSASSRW
Sbjct: 181 ASRWAARQMSLPPARVPHQQQHYNRHGGDARPQRYLVQSASSRW 224
>Os11g0444900 Octicosapeptide/Phox/Bem1p domain containing protein
Length = 108
Score = 184 bits (467), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 88/91 (96%), Positives = 88/91 (96%)
Query: 36 EGACVKFLCSYGGRILPRHADGALRYVGGDNRVVSVDRSLPFHELQRKLREMCGWEAVCL 95
EG VKFLCSYGGRILPRHADGALRYVGGDNRVVSVDRSLPFHELQRKLREMCGWEAVCL
Sbjct: 18 EGTFVKFLCSYGGRILPRHADGALRYVGGDNRVVSVDRSLPFHELQRKLREMCGWEAVCL 77
Query: 96 RCQLPTEDLDALVSVNGDDDLANLLEEYDAA 126
RCQLPTEDLDALVSV GDDDLANLLEEYDAA
Sbjct: 78 RCQLPTEDLDALVSVTGDDDLANLLEEYDAA 108
>Os05g0427100 Octicosapeptide/Phox/Bem1p domain containing protein
Length = 366
Score = 110 bits (275), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 50/104 (48%), Positives = 73/104 (70%), Gaps = 2/104 (1%)
Query: 40 VKFLCSYGGRILPRHADGALRYVGGDNRVVSVDRSLPFHELQRKLREMCGWEAVCLRCQL 99
+K LCS+GGRI+PR +DGAL+Y+GG+ RV++V RS+PF +L++K+ EM E ++ QL
Sbjct: 43 IKILCSFGGRIMPRPSDGALKYIGGETRVLAVPRSIPFSDLKKKVEEMFRTEVAAIKYQL 102
Query: 100 PTEDLDALVSVNGDDDLANLLEEYD--AASRDRLQPLKIRAFLF 141
EDLD LVSV D+DL ++L+EYD A R + R ++F
Sbjct: 103 VAEDLDVLVSVTCDEDLTHMLDEYDRFEAKRSPSASPRFRVYVF 146
>Os12g0594300 Octicosapeptide/Phox/Bem1p domain containing protein
Length = 1133
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 48/115 (41%), Positives = 79/115 (68%), Gaps = 2/115 (1%)
Query: 41 KFLCSYGGRILPRHADGALRYVGGDNRVVSVDRSLPFHELQRKLREMCGWEAVCLRCQLP 100
KF+CS+GG+I+PR +DG LRYVGG+ R++S+ R+ ++EL +K ++ + ++ QLP
Sbjct: 117 KFMCSFGGKIMPRPSDGKLRYVGGETRLISIPRNFSWNELVQKTLKIYSQPHI-IKYQLP 175
Query: 101 TEDLDALVSVNGDDDLANLLEEYDAASRDRLQPLKIRAFLFPRTTATTTAPLSRS 155
EDLDAL+S++ D+DL N++EEY + + P ++R FL +T ++ SRS
Sbjct: 176 EEDLDALISLSCDEDLQNMMEEYSSLEKANSSP-RLRIFLVSQTECEDSSLDSRS 229
>Os01g0139200 Octicosapeptide/Phox/Bem1p domain containing protein
Length = 671
Score = 93.6 bits (231), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 73/109 (66%), Gaps = 6/109 (5%)
Query: 40 VKFLCSYGGRILPRHADGALRYVGGDNRVVSVDRSLPFHELQRKL-REMCGWEAVCLRCQ 98
++ +CS+GGRI+PR D +L Y+GG+ R+V+V+R+ ++ +L R + G + L+ Q
Sbjct: 56 LRLMCSFGGRIVPRPTDKSLCYLGGETRIVAVERNASLADVHARLSRSLLGGQPFTLKYQ 115
Query: 99 LPTEDLDALVSVNGDDDLANLLEEYD-----AASRDRLQPLKIRAFLFP 142
LP EDLD+L+SV+ D+DL NL++EYD ++ + +IR FLFP
Sbjct: 116 LPNEDLDSLISVSTDEDLDNLVDEYDRIAATSSGGGSSRTSRIRLFLFP 164
>Os07g0556300 Octicosapeptide/Phox/Bem1p domain containing protein
Length = 423
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/118 (44%), Positives = 72/118 (61%), Gaps = 9/118 (7%)
Query: 38 ACVKFLCSYGGRILPRHADGALRYVGGDNRVVSVDRSLPFHELQRKLREM------CGWE 91
A V+ +CS+GGRILPR D LRYVGG+ R+VSV R+ F L L ++ G
Sbjct: 92 AHVRLMCSFGGRILPRPGDHQLRYVGGETRIVSVPRAATFDALVAALAKVAPALFPAGGP 151
Query: 92 AVCLRCQLPTEDLDALVSVNGDDDLANLLEEYD---AASRDRLQPLKIRAFLFPRTTA 146
+ LR QLP +DLDAL+S+ DDD+ NL+EE D + ++P ++R FLF + A
Sbjct: 152 SPALRYQLPQDDLDALISITSDDDVDNLIEEIDRFQGLAAASIKPPRLRLFLFASSPA 209
>Os02g0766800
Length = 200
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/134 (38%), Positives = 78/134 (58%), Gaps = 18/134 (13%)
Query: 37 GACV------KFLCSYGGRILPRHADGALRYVGGDNRVVSVDRSLPFH---ELQRKLREM 87
GACV K LCS+GGRI+P +D AL+Y+ + R+++V RS+PF +L++K+ EM
Sbjct: 39 GACVDGGSRIKILCSFGGRIMPCPSDDALKYIDSETRILAVPRSIPFSPRADLKKKVEEM 98
Query: 88 CGWEAVCLRCQLPTEDLDALVSVNGDDDLANLLEEYDAASRDRLQPL---KIRAFLFPRT 144
E + EDLD LVSV D+DL ++L+EYD S+++ P + R ++F
Sbjct: 99 FRTEVAVV-----AEDLDVLVSVTWDEDLTHMLDEYD-CSKEKRSPSASPRFRVYIFSSH 152
Query: 145 TATTTAPLSRSPSP 158
+ T + PSP
Sbjct: 153 GSACTTTAAPVPSP 166
>Os07g0438500 Octicosapeptide/Phox/Bem1p domain containing protein
Length = 862
Score = 85.1 bits (209), Expect = 3e-17, Method: Composition-based stats.
Identities = 40/83 (48%), Positives = 61/83 (73%), Gaps = 1/83 (1%)
Query: 40 VKFLCSYGGRILPRHADGALRYVGGDNRVVSVDRSLPFHELQRKLREMCGWEAVCLRCQL 99
+K LCS+GG+ILPR +DG LRYVGG+ ++ + R++ + EL++K + V ++ QL
Sbjct: 166 IKILCSFGGKILPRPSDGKLRYVGGETHIIRISRNISWQELKQKTTAIYNQPHV-IKYQL 224
Query: 100 PTEDLDALVSVNGDDDLANLLEE 122
P EDLDAL+SV+ D+DL N++EE
Sbjct: 225 PGEDLDALISVSNDEDLRNMMEE 247
>Os02g0809100 Octicosapeptide/Phox/Bem1p domain containing protein
Length = 507
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 56/86 (65%), Gaps = 1/86 (1%)
Query: 40 VKFLCSYGGRILPRHADGALRYVGGDNRVVSVDRSLPFHELQRKLREMCGWEA-VCLRCQ 98
V+ + SYGGRI PR D L YV G+ +++S++R L F + +L + G C++ Q
Sbjct: 41 VRLMVSYGGRIQPRPHDHQLSYVNGETKILSLERPLRFADFAARLAGLAGSPGDFCVKYQ 100
Query: 99 LPTEDLDALVSVNGDDDLANLLEEYD 124
LP EDLDALVSV D+DL +L+ EYD
Sbjct: 101 LPGEDLDALVSVTNDEDLEHLVLEYD 126
>Os03g0691650
Length = 250
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 53/90 (58%), Gaps = 5/90 (5%)
Query: 40 VKFLCSYGGRILPRHADGALRYVGGDNRVVSVDRSLPFHELQRKLREMCG-----WEAVC 94
++ LCS+GGR++P G LRYVGG+ R ++V R PF EL +L E G AV
Sbjct: 1 MRLLCSHGGRLVPCGPGGGLRYVGGETRALAVPRGAPFRELTARLAEKAGAGGDAVTAVR 60
Query: 95 LRCQLPTEDLDALVSVNGDDDLANLLEEYD 124
R D D LVSV D++LA++ +EYD
Sbjct: 61 YRLADGGLDEDLLVSVTSDEELAHMRDEYD 90
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.320 0.133 0.416
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 7,957,507
Number of extensions: 356061
Number of successful extensions: 2221
Number of sequences better than 1.0e-10: 10
Number of HSP's gapped: 2214
Number of HSP's successfully gapped: 10
Length of query: 224
Length of database: 17,035,801
Length adjustment: 97
Effective length of query: 127
Effective length of database: 11,971,043
Effective search space: 1520322461
Effective search space used: 1520322461
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 154 (63.9 bits)