BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os11g0214100 Os11g0214100|Os11g0214100
         (110 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os11g0214100  Similar to Histidine-rich glycoprotein precursor    137   2e-33
Os11g0214400  Plant disease resistance response protein fami...   100   2e-22
Os11g0214900  Plant disease resistance response protein fami...    96   5e-21
Os11g0214700  Plant disease resistance response protein fami...    95   1e-20

>Os11g0214100 Similar to Histidine-rich glycoprotein precursor
          Length = 110

 Score =  137 bits (345), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 72/97 (74%), Positives = 72/97 (74%)

Query: 14  ILAVAVFLRHHIGASXXXXXXXHLHFYMHDTYTGPAPTTMRVVSGRSLLXXXXXXXXXAT 73
           ILAVAVFLRHHIGAS       HLHFYMHDTYTGPAPTTMRVVSGRSLL         AT
Sbjct: 14  ILAVAVFLRHHIGASTTTTTTTHLHFYMHDTYTGPAPTTMRVVSGRSLLDDGDGNNNDAT 73

Query: 74  XXXXXXXXXRRQFGDIVVLNSALTEGPSANSARMGTA 110
                    RRQFGDIVVLNSALTEGPSANSARMGTA
Sbjct: 74  SPPSSSSPPRRQFGDIVVLNSALTEGPSANSARMGTA 110



>Os11g0214400 Plant disease resistance response protein family protein
          Length = 192

 Score =  100 bits (250), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 56/97 (57%), Positives = 62/97 (63%), Gaps = 8/97 (8%)

Query: 14  ILAVAVFLRHHIGASXXXXXXXHLHFYMHDTYTGPAPTTMRVVSGRSLLXXXXXXXXXAT 73
           ++A AV LR H  A+       HLHFYMHD YTGPAPT MRVVSGRSLL         +T
Sbjct: 18  LIAAAVLLRRHDSAAATTTTTTHLHFYMHDAYTGPAPTAMRVVSGRSLL--------QST 69

Query: 74  XXXXXXXXXRRQFGDIVVLNSALTEGPSANSARMGTA 110
                     RQFGDIVVLN+ALTEGP A SAR+GTA
Sbjct: 70  TDIVDGSSPPRQFGDIVVLNNALTEGPDAGSARVGTA 106



>Os11g0214900 Plant disease resistance response protein family protein
          Length = 189

 Score = 96.3 bits (238), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 58/97 (59%), Positives = 61/97 (62%), Gaps = 6/97 (6%)

Query: 14  ILAVAVFLRHHIGASXXXXXXXHLHFYMHDTYTGPAPTTMRVVSGRSLLXXXXXXXXXAT 73
           +LA AVFL H  GAS       HLHFYMHD YTGPAPT MRVVSGRSLL           
Sbjct: 13  LLAAAVFL-HRNGASTTTTTT-HLHFYMHDAYTGPAPTAMRVVSGRSLLDGDNGNGNGNG 70

Query: 74  XXXXXXXXXRRQFGDIVVLNSALTEGPSANSARMGTA 110
                     RQFGDIV LN+ALTEGPSA SAR+GTA
Sbjct: 71  DDGSPP----RQFGDIVALNNALTEGPSAGSARVGTA 103



>Os11g0214700 Plant disease resistance response protein family protein
          Length = 159

 Score = 95.1 bits (235), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 56/97 (57%), Positives = 60/97 (61%), Gaps = 17/97 (17%)

Query: 14  ILAVAVFLRHHIGASXXXXXXXHLHFYMHDTYTGPAPTTMRVVSGRSLLXXXXXXXXXAT 73
           +LA A+FL H  GAS       HLHFYMHD YTGPAPT MRVVSGRSLL           
Sbjct: 13  LLAAAIFL-HRNGASTTTT---HLHFYMHDAYTGPAPTAMRVVSGRSLLDDGGDAVP--- 65

Query: 74  XXXXXXXXXRRQFGDIVVLNSALTEGPSANSARMGTA 110
                     RQFGDIV LN+ALTEGPSA S R+GTA
Sbjct: 66  ----------RQFGDIVALNNALTEGPSAGSTRVGTA 92



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.324    0.133    0.388 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 2,218,359
Number of extensions: 45895
Number of successful extensions: 153
Number of sequences better than 1.0e-10: 4
Number of HSP's gapped: 150
Number of HSP's successfully gapped: 4
Length of query: 110
Length of database: 17,035,801
Length adjustment: 77
Effective length of query: 33
Effective length of database: 13,015,323
Effective search space: 429505659
Effective search space used: 429505659
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 149 (62.0 bits)