Os11g0214900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Plant disease resistance response protein family protein.
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Os11g0214900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Plant disease resistance response protein family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 159.06 | 0.593 | 11.2 | -0.52 | 0.73 | -1.09 | 1.42 | -1.35 | -0.896 | 8.9 | 48.16 | 1320 | -- | -- |
| 162.28 | 0.593 | 11.2 | -0.558 | 0.749 | -1.11 | 1.5 | -- | -0.9 | 8.75 | 48 | 1275 | -- | -- |
| 165.38 | 0.599 | 11.2 | -0.492 | 0.708 | -0.993 | -- | -1.31 | -0.901 | 8.3 | 47.99 | 1386 | -- | -- |
| 167.56 | 0.603 | 11.2 | -0.647 | 0.821 | -1.26 | -- | -- | -0.936 | 8.98 | 48 | 1205 | -- | -- |
| 192.58 | 0.646 | 11.2 | -0.483 | -- | -1.02 | -- | -1.25 | -0.899 | -- | 48 | 1420 | -- | -- |
| 194.92 | 0.655 | 11.2 | -0.587 | 0.72 | -- | 1.23 | -- | -0.877 | 8 | -- | -- | -- | -- |
| 199.31 | 0.661 | 11.2 | -0.554 | 0.724 | -- | -- | -- | -0.879 | 7.76 | -- | -- | -- | -- |
| 195.4 | 0.651 | 11.2 | -0.573 | -- | -1.11 | -- | -- | -0.899 | -- | 48.26 | 1410 | -- | -- |
| 177.97 | 0.621 | 11.2 | -- | 0.788 | -1.21 | -- | -- | -0.857 | 8.98 | 48.04 | 1220 | -- | -- |
| 227.66 | 0.705 | 11.2 | -0.545 | -- | -- | -- | -- | -0.869 | -- | -- | -- | -- | -- |
| 207.41 | 0.674 | 11.2 | -- | 0.72 | -- | -- | -- | -0.817 | 7.81 | -- | -- | -- | -- |
| 205.23 | 0.667 | 11.2 | -- | -- | -1.09 | -- | -- | -0.85 | -- | 48.97 | 1419 | -- | -- |
| 235.51 | 0.716 | 11.2 | -- | -- | -- | -- | -- | -0.808 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 147.13 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 6 | 6 |
| 13 | 149.38 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 6 | 6 |
| 17 | 149.62 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 29 | 151.15 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 12 | 1 |
| 30 | 151.16 | wind | 1.0 | 4320 | > th | dose independent | rect. | 17 | 2 |
| 37 | 151.39 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 11 | 1 |
| 38 | 151.48 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 45 | 151.98 | humidity | 80.0 | 1440 | < th | dose independent | sin | 4 | NA |
| 51 | 152.13 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 16 | 1 |
| 53 | 152.22 | wind | 9.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 68 | 152.91 | wind | 3.0 | 14400 | < th | dose independent | rect. | 3 | 1 |
| 72 | 153.09 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 9 | 4 |
| 75 | 153.15 | wind | 9.0 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 76 | 153.21 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 16 | 1 |
| 80 | 153.33 | humidity | 80.0 | 1440 | > th | dose independent | sin | 4 | NA |
| 81 | 153.33 | wind | 3.0 | 43200 | > th | dose independent | rect. | 5 | 2 |
| 84 | 153.38 | humidity | 80.0 | 720 | < th | dose dependent | rect. | 16 | 19 |
| 86 | 153.42 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 16 | 1 |
| 87 | 153.42 | wind | 3.0 | 43200 | < th | dose independent | rect. | 5 | 2 |
| 88 | 153.42 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 16 | 1 |
| 91 | 153.55 | wind | 3.0 | 43200 | < th | dose independent | rect. | 20 | 11 |
| 93 | 153.59 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 6 | 8 |
| 97 | 153.70 | wind | 3.0 | 43200 | < th | dose independent | rect. | 1 | 6 |
| 106 | 153.93 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 3 | 2 |
| 115 | 154.03 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 3 | 14 |
| 124 | 154.23 | wind | 3.0 | 43200 | > th | dose independent | rect. | 1 | 6 |
| 125 | 154.25 | wind | 3.0 | 43200 | < th | dose independent | rect. | 23 | 8 |
| 126 | 154.27 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 13 | 4 |
| 128 | 154.32 | wind | 3.0 | 43200 | < th | dose independent | rect. | 1 | 3 |
| 133 | 154.45 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 13 | 4 |
| 134 | 154.45 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 13 | 4 |
| 138 | 154.48 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 3 | 14 |
| 140 | 154.49 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 3 | 14 |
| 141 | 154.49 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 3 | 14 |
| 160 | 154.71 | wind | 3.0 | 14400 | > th | dose independent | rect. | 3 | 1 |
| 175 | 154.85 | wind | 3.0 | 43200 | > th | dose independent | rect. | 20 | 11 |
| 187 | 154.94 | wind | 3.0 | 43200 | > th | dose independent | rect. | 23 | 8 |
| 201 | 155.08 | wind | 3.0 | 43200 | > th | dose independent | rect. | 1 | 3 |
| 206 | 155.15 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 13 | 7 |
| 207 | 155.15 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 13 | 7 |
| 211 | 155.20 | wind | 3.0 | 43200 | < th | dose independent | sin | 9 | NA |
| 216 | 155.21 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 13 | 7 |
| 223 | 155.26 | wind | 3.0 | 43200 | < th | dose independent | rect. | 1 | 13 |
| 237 | 155.38 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 8 | 9 |
| 245 | 155.48 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 21 | 10 |
| 271 | 155.65 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 15 | 5 |
| 273 | 155.65 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 15 | 5 |
| 288 | 155.75 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 5 | 2 |
| 314 | 155.95 | wind | 1.0 | 1440 | > th | dose independent | rect. | 9 | 10 |
| 319 | 155.97 | wind | 3.0 | 43200 | > th | dose independent | sin | 9 | NA |
| 323 | 155.98 | wind | 3.0 | 43200 | > th | dose independent | rect. | 1 | 13 |
| 325 | 155.99 | wind | 9.0 | 43200 | < th | dose independent | rect. | 12 | 2 |
| 333 | 156.07 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 5 | 2 |
| 334 | 156.08 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 15 | 1 |
| 364 | 156.26 | humidity | 80.0 | 720 | < th | dose dependent | sin | 11 | NA |
| 380 | 156.35 | wind | 3.0 | 43200 | < th | dose independent | rect. | 20 | 17 |
| 390 | 156.39 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 21 | 13 |
| 399 | 156.43 | wind | 1.0 | 43200 | > th | dose independent | rect. | 1 | 1 |
| 422 | 156.55 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 14 | 6 |
| 434 | 156.56 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 14 | 4 |
| 452 | 156.61 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 2 | 22 |
| 454 | 156.62 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 24 | 13 |
| 501 | 156.85 | wind | 3.0 | 43200 | < th | dose dependent | sin | 7 | NA |
| 504 | 156.88 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 532 | 156.99 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 4 | 20 |
| 575 | 157.20 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 3 | 10 |
| 619 | 157.36 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 3 | 17 |
| 631 | 157.43 | wind | 1.0 | 4320 | < th | dose independent | rect. | 17 | 2 |
| 632 | 157.43 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 17 | 2 |
| 693 | 157.62 | humidity | 50.0 | 1440 | < th | dose independent | rect. | 15 | 3 |
| 725 | 157.67 | humidity | 50.0 | 1440 | > th | dose dependent | sin | 3 | NA |
| 731 | 157.69 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 14 | 4 |
| 732 | 157.69 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 15 | 10 |
| 736 | 157.70 | wind | 9.0 | 43200 | < th | dose independent | rect. | 10 | 4 |
| 737 | 157.70 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 13 | 7 |
| 743 | 157.72 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 15 | 15 |
| 748 | 157.73 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 15 | 3 |
| 754 | 157.75 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 15 | 13 |
| 761 | 157.76 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 14 | 11 |
| 777 | 157.78 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 14 | 6 |
| 788 | 157.79 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 15 | 8 |
| 807 | 157.85 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 5 | 1 |
| 822 | 157.88 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 1 | 19 |
| 826 | 157.88 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 1 | 19 |
| 887 | 158.02 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 4 | 1 |
| 902 | 158.08 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 1 | 19 |
| 937 | 158.18 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 5 | 4 |
| 945 | 158.21 | wind | 1.0 | 1440 | < th | dose independent | rect. | 9 | 10 |
| 949 | 158.22 | precipitation | 0.1 | 14400 | < th | dose independent | sin | 23 | NA |
| 954 | 158.22 | precipitation | 0.1 | 14400 | < th | dose dependent | sin | 23 | NA |
| 957 | 158.24 | precipitation | 0.1 | 14400 | > th | dose independent | sin | 23 | NA |
| 967 | 158.28 | precipitation | 0.1 | 4320 | < th | dose independent | sin | 2 | NA |
| 971 | 158.28 | precipitation | 0.1 | 4320 | < th | dose dependent | sin | 2 | NA |
| 982 | 158.31 | precipitation | 0.1 | 4320 | > th | dose independent | sin | 2 | NA |
| 990 | 158.31 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 5 | 4 |